RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W ENP1P38333 483 aaKnown RBP2.31□□□□□ -2.04
TRM3YDL112W CUZ1P53899 274 aa2.31□□□□□ -2.04
TRM3YDL112W BSC2Q05611 235 aa2.31□□□□□ -2.04
TRM3YDL112W TED1P40533 473 aa2.31□□□□□ -2.04
TRM3YDL112W DAK2P43550 591 aa2.31□□□□□ -2.04
TRM3YDL112W SAP155P43612 1002 aa2.31□□□□□ -2.04
TRM3YDL112W AUS1Q08409 1394 aa2.3□□□□□ -2.04
TRM3YDL112W TRL1P09880 827 aaKnown RBP2.3□□□□□ -2.04
TRM3YDL112W YKL222CP35995 705 aa2.3□□□□□ -2.04
TRM3YDL112W CIC1P38779 376 aaKnown RBP2.3□□□□□ -2.04
TRM3YDL112W CHZ1P40019 153 aaPredicted RBP2.3□□□□□ -2.04
TRM3YDL112W IOC4Q04213 475 aa2.3□□□□□ -2.04
TRM3YDL112W RGP1P16664 663 aa2.3□□□□□ -2.04
TRM3YDL112W UBP15P50101 1230 aa2.3□□□□□ -2.04
TRM3YDL112W MDG1P53885 366 aa2.3□□□□□ -2.04
TRM3YDL112W UFD2P54860 961 aa2.3□□□□□ -2.04
TRM3YDL112W YPQ2Q06328 317 aa2.3□□□□□ -2.04
TRM3YDL112W ALG6Q12001 544 aaKnown RBP2.3□□□□□ -2.04
TRM3YDL112W CDC19P00549 500 aaKnown RBP2.3□□□□□ -2.04
TRM3YDL112W RPS24AP0CX31 135 aaKnown RBP2.3□□□□□ -2.04
TRM3YDL112W RPS24BP0CX32 135 aaKnown RBP2.3□□□□□ -2.04
TRM3YDL112W SEN54Q02825 467 aaPredicted RBP2.3□□□□□ -2.04
TRM3YDL112W BAS1P22035 811 aa2.29□□□□□ -2.04
TRM3YDL112W ALG14P38242 237 aa2.29□□□□□ -2.04
TRM3YDL112W YGR035CP53222 116 aa2.29□□□□□ -2.04
TRM3YDL112W SVF1Q05515 481 aa2.29□□□□□ -2.04
TRM3YDL112W MRP10O75012 95 aa2.29□□□□□ -2.04
TRM3YDL112W MCM7P38132 845 aa2.29□□□□□ -2.04
TRM3YDL112W FAA3P39002 694 aa2.29□□□□□ -2.04
TRM3YDL112W KIP3P53086 805 aaKnown RBP2.29□□□□□ -2.04
TRM3YDL112W ADE16P54113 591 aaKnown RBP2.29□□□□□ -2.04
TRM3YDL112W LSO1Q3E827 93 aa2.29□□□□□ -2.04
TRM3YDL112W LYS2P07702 1392 aa2.29□□□□□ -2.04
TRM3YDL112W MET4P32389 672 aa2.29□□□□□ -2.04
TRM3YDL112W YBR287WP38355 427 aa2.29□□□□□ -2.04
TRM3YDL112W SAM37P50110 327 aa2.29□□□□□ -2.04
TRM3YDL112W MSN5P52918 1224 aa2.28□□□□□ -2.04
TRM3YDL112W GPI13Q07830 1017 aa2.28□□□□□ -2.04
TRM3YDL112W THI72Q08579 599 aa2.28□□□□□ -2.04
TRM3YDL112W PFF1P38244 976 aa2.28□□□□□ -2.04
TRM3YDL112W LSB6P42951 607 aa2.28□□□□□ -2.04
TRM3YDL112W ACF4P47129 309 aa2.28□□□□□ -2.04
TRM3YDL112W SSK22P25390 1331 aaPredicted RBP2.28□□□□□ -2.04
TRM3YDL112W GCD6P32501 712 aaKnown RBP2.28□□□□□ -2.04
TRM3YDL112W YNL011CP53980 444 aa2.28□□□□□ -2.04
TRM3YDL112W LCB5Q06147 687 aaKnown RBP2.28□□□□□ -2.04
TRM3YDL112W TY1A-BLQ12266 440 aa2.28□□□□□ -2.04
TRM3YDL112W SLA1P32790 1244 aa2.28□□□□□ -2.05
TRM3YDL112W IRS4P36115 615 aaKnown RBP2.28□□□□□ -2.05
TRM3YDL112W YER156CP40093 338 aaKnown RBP2.28□□□□□ -2.05
TRM3YDL112W DIB1Q06819 143 aaPredicted RBP2.28□□□□□ -2.05
TRM3YDL112W NOP8Q08287 484 aaPredicted RBP2.28□□□□□ -2.05
TRM3YDL112W RPS31P05759 152 aaKnown RBP2.27□□□□□ -2.05
TRM3YDL112W OSM1P21375 501 aaKnown RBP2.27□□□□□ -2.05
TRM3YDL112W RRT14P40470 206 aa2.27□□□□□ -2.05
TRM3YDL112W GAS5Q08193 484 aa2.27□□□□□ -2.05
TRM3YDL112W NUP145P49687 1317 aa2.27□□□□□ -2.05
TRM3YDL112W PET112P33893 541 aa2.27□□□□□ -2.05
TRM3YDL112W APM2P38700 605 aa2.27□□□□□ -2.05
TRM3YDL112W KIN4Q01919 800 aa2.27□□□□□ -2.05
TRM3YDL112W GDE1Q02979 1223 aa2.27□□□□□ -2.05
TRM3YDL112W TOS4Q06266 489 aa2.27□□□□□ -2.05
TRM3YDL112W EMG1Q06287 252 aaKnown RBP2.27□□□□□ -2.05
TRM3YDL112W ATG13Q06628 738 aa2.27□□□□□ -2.05
TRM3YDL112W WRS1Q12109 432 aaKnown RBP2.27□□□□□ -2.05
TRM3YDL112W NYV1Q12255 253 aa2.27□□□□□ -2.05
TRM3YDL112W BOI2P39969 1040 aa2.27□□□□□ -2.05
TRM3YDL112W ERO1Q03103 563 aa2.27□□□□□ -2.05
TRM3YDL112W YOR296WQ08748 1289 aa2.27□□□□□ -2.05
TRM3YDL112W FAL1Q12099 399 aaKnown RBP2.27□□□□□ -2.05
TRM3YDL112W NFS1P25374 497 aa2.26□□□□□ -2.05
TRM3YDL112W PYC2P32327 1180 aaKnown RBP2.26□□□□□ -2.05
TRM3YDL112W AKR1P39010 764 aa2.26□□□□□ -2.05
TRM3YDL112W RGD2P43556 714 aa2.26□□□□□ -2.05
TRM3YDL112W EAF6P47128 113 aa2.26□□□□□ -2.05
TRM3YDL112W PHM7Q12252 991 aa2.26□□□□□ -2.05
TRM3YDL112W FAS2P19097 1887 aaKnown RBP2.26□□□□□ -2.05
TRM3YDL112W GLY1P37303 387 aaKnown RBP2.26□□□□□ -2.05
TRM3YDL112W YFR016CP43597 1233 aaKnown RBP2.26□□□□□ -2.05
TRM3YDL112W ITC1P53125 1264 aa2.26□□□□□ -2.05
TRM3YDL112W GSC2P40989 1895 aa2.26□□□□□ -2.05
TRM3YDL112W MRPS18P42847 217 aa2.26□□□□□ -2.05
TRM3YDL112W MCM1P11746 286 aa2.26□□□□□ -2.05
TRM3YDL112W SHC1P39000 512 aa2.26□□□□□ -2.05
TRM3YDL112W SBE2P42223 864 aaKnown RBP2.26□□□□□ -2.05
TRM3YDL112W AVO1Q08236 1176 aa2.26□□□□□ -2.05
TRM3YDL112W YLR278CQ05854 1341 aa2.25□□□□□ -2.05
TRM3YDL112W DIT1P21623 536 aa2.25□□□□□ -2.05
TRM3YDL112W ASF1P32447 279 aa2.25□□□□□ -2.05
TRM3YDL112W NSG2P53898 299 aa2.25□□□□□ -2.05
TRM3YDL112W DAL1P32375 460 aa2.25□□□□□ -2.05
TRM3YDL112W MDJ1P35191 511 aa2.25□□□□□ -2.05
TRM3YDL112W RAT1Q02792 1006 aaKnown RBP2.25□□□□□ -2.05
TRM3YDL112W TY1A-MR1Q04215 440 aa2.25□□□□□ -2.05
TRM3YDL112W PMD1P32634 1753 aa2.25□□□□□ -2.05
TRM3YDL112W IDI1P15496 288 aa2.25□□□□□ -2.05
TRM3YDL112W HPF1Q05164 967 aa2.25□□□□□ -2.05
TRM3YDL112W YKL077WP36081 392 aa2.24□□□□□ -2.05
TRM3YDL112W FET4P40988 552 aa2.24□□□□□ -2.05
TRM3YDL112W PRY1P47032 299 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms