RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	NOG1	Q02892	647 aa	Known RBP	4.96	□□□□□ -1.62
HCM1	YCR065W	ADI1	Q03677	179 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	SVF1	Q05515	481 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	ELG1	Q12050	791 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	TY1A-NL1	Q12391	440 aa	Known RBP	4.96	□□□□□ -1.62
HCM1	YCR065W	YPR053C	Q6Q5F3	151 aa		4.96	□□□□□ -1.62
HCM1	YCR065W	HEM13	P11353	328 aa	Known RBP	4.95	□□□□□ -1.62
HCM1	YCR065W	KAR2	P16474	682 aa	Known RBP	4.95	□□□□□ -1.62
HCM1	YCR065W	PRE9	P23638	258 aa	Known RBP	4.95	□□□□□ -1.62
HCM1	YCR065W	MSH3	P25336	1018 aa		4.95	□□□□□ -1.62
HCM1	YCR065W	ENP1	P38333	483 aa	Known RBP	4.95	□□□□□ -1.62
HCM1	YCR065W	ICP55	P40051	511 aa		4.95	□□□□□ -1.62
HCM1	YCR065W	YMR187C	Q03236	431 aa		4.95	□□□□□ -1.62
HCM1	YCR065W	PHM7	Q12252	991 aa		4.95	□□□□□ -1.62
HCM1	YCR065W	TSR4	P25040	408 aa		4.94	□□□□□ -1.62
HCM1	YCR065W	PWP2	P25635	923 aa	Known RBP	4.94	□□□□□ -1.62
HCM1	YCR065W	BLI1	P35727	113 aa		4.94	□□□□□ -1.62
HCM1	YCR065W	UTP22	P53254	1237 aa	Predicted RBP	4.94	□□□□□ -1.62
HCM1	YCR065W	ESF2	P53743	316 aa	Known RBP	4.94	□□□□□ -1.62
HCM1	YCR065W	DSE4	P53753	1117 aa		4.94	□□□□□ -1.62
HCM1	YCR065W	PKH1	Q03407	766 aa		4.94	□□□□□ -1.62
HCM1	YCR065W	MCA1	Q08601	432 aa		4.94	□□□□□ -1.62
HCM1	YCR065W	PEP7	P32609	515 aa		4.93	□□□□□ -1.62
HCM1	YCR065W	SQT1	P35184	431 aa		4.93	□□□□□ -1.62
HCM1	YCR065W	RRP14	P36080	434 aa	Known RBP	4.93	□□□□□ -1.62
HCM1	YCR065W	PEX28	P38848	579 aa		4.93	□□□□□ -1.62
HCM1	YCR065W	YGL081W	P53156	320 aa		4.93	□□□□□ -1.62
HCM1	YCR065W	ECM16	Q04217	1267 aa	Known RBP	4.93	□□□□□ -1.62
HCM1	YCR065W	ERP4	Q12450	207 aa		4.93	□□□□□ -1.62
HCM1	YCR065W	AI3	P03877	415 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	OPI1	P21957	404 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	NFU1	P32860	256 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	NEM1	P38757	446 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	NMD3	P38861	518 aa	Known RBP	4.92	□□□□□ -1.62
HCM1	YCR065W	SKN7	P38889	622 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	FAF1	P40546	346 aa	Predicted RBP	4.92	□□□□□ -1.62
HCM1	YCR065W	MRPS18	P42847	217 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	GCV1	P48015	400 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	COG4	Q06096	861 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	YOL057W	Q08225	711 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	MCD1	Q12158	566 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	CDC11	P32458	415 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	MAE1	P36013	669 aa	Known RBP	4.92	□□□□□ -1.62
HCM1	YCR065W	SLS1	P42900	643 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	YGL140C	P53120	1219 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	YMR074C	Q04773	145 aa		4.92	□□□□□ -1.62
HCM1	YCR065W	ALG6	Q12001	544 aa	Known RBP	4.92	□□□□□ -1.62
HCM1	YCR065W	SSB1	P11484	613 aa	Known RBP	4.91	□□□□□ -1.62
HCM1	YCR065W	KAR1	P11927	433 aa		4.91	□□□□□ -1.62
HCM1	YCR065W	SSB2	P40150	613 aa	Known RBP	4.91	□□□□□ -1.62
HCM1	YCR065W	XKS1	P42826	600 aa		4.91	□□□□□ -1.62
HCM1	YCR065W	NCE103	P53615	221 aa		4.91	□□□□□ -1.62
HCM1	YCR065W	GDE1	Q02979	1223 aa		4.91	□□□□□ -1.62
HCM1	YCR065W	YDR341C	Q05506	607 aa	Known RBP	4.91	□□□□□ -1.62
HCM1	YCR065W	ESF1	Q06344	628 aa	Known RBP	4.91	□□□□□ -1.62
HCM1	YCR065W	PUS1	Q12211	544 aa	Known RBP	4.91	□□□□□ -1.62
HCM1	YCR065W	SFA1	P32771	386 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	YKL077W	P36081	392 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	RDH54	P38086	958 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	DNM1	P54861	757 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	MEC3	Q02574	474 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	IMH1	Q06704	911 aa	Known RBP	4.9	□□□□□ -1.62
HCM1	YCR065W	REC8	Q12188	680 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	DNA2	P38859	1522 aa		4.9	□□□□□ -1.62
HCM1	YCR065W	TY1B-A	O13527	1196 aa	Known RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	SEC23	P15303	768 aa	Known RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	REI1	P38344	393 aa	Predicted RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	SHU2	P38957	223 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	UTP5	Q04177	643 aa	Known RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	ENT2	Q05785	613 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	SSF2	Q12153	453 aa	Predicted RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	NKP1	Q12493	238 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	GCR1	P07261	785 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	TAT1	P38085	619 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	DJP1	P40564	432 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	SEC27	P41811	889 aa	Known RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	SPO74	P45819	413 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	ARI1	P53111	347 aa	Known RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	CEF1	Q03654	590 aa	Predicted RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	RCF1	Q03713	159 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	YLR257W	Q06146	321 aa	Known RBP	4.89	□□□□□ -1.63
HCM1	YCR065W	HDA2	Q06629	674 aa		4.89	□□□□□ -1.63
HCM1	YCR065W	MUM2	P38236	366 aa		4.88	□□□□□ -1.63
HCM1	YCR065W	PEA2	P40091	420 aa		4.88	□□□□□ -1.63
HCM1	YCR065W	TAF1	P46677	1066 aa		4.88	□□□□□ -1.63
HCM1	YCR065W	GNP1	P48813	663 aa		4.88	□□□□□ -1.63
HCM1	YCR065W	JIP5	Q06214	492 aa	Predicted RBP	4.88	□□□□□ -1.63
HCM1	YCR065W	MRL1	Q06815	381 aa		4.88	□□□□□ -1.63
HCM1	YCR065W	SNU66	Q12420	587 aa	Predicted RBP	4.88	□□□□□ -1.63
HCM1	YCR065W	NAM7	P30771	971 aa	Known RBP	4.87	□□□□□ -1.63
HCM1	YCR065W	PPG1	P32838	368 aa		4.87	□□□□□ -1.63
HCM1	YCR065W	PET112	P33893	541 aa		4.87	□□□□□ -1.63
HCM1	YCR065W	MAL31	P38156	614 aa		4.87	□□□□□ -1.63
HCM1	YCR065W	HOS2	P53096	452 aa	Predicted RBP	4.87	□□□□□ -1.63
HCM1	YCR065W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
HCM1	YCR065W	RMD1	Q03441	430 aa		4.87	□□□□□ -1.63
HCM1	YCR065W	DOT1	Q04089	582 aa	Known RBP	4.87	□□□□□ -1.63
HCM1	YCR065W	YOR223W	Q12015	292 aa		4.87	□□□□□ -1.63
HCM1	YCR065W	CFT2	Q12102	859 aa	Predicted RBP	4.87	□□□□□ -1.63
HCM1	YCR065W	YOL098C	Q12496	1037 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms