RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C ERG12P07277 443 aa8.5□□□□□ -1.05
RRP43YCR035C SRP54P20424 541 aaKnown RBP8.5□□□□□ -1.05
RRP43YCR035C MAL33P38157 468 aa8.5□□□□□ -1.05
RRP43YCR035C RXT2P38255 430 aa8.5□□□□□ -1.05
RRP43YCR035C TIF4631P39935 952 aaKnown RBP8.5□□□□□ -1.05
RRP43YCR035C PCI8P40512 444 aa8.5□□□□□ -1.05
RRP43YCR035C YDR341CQ05506 607 aaKnown RBP8.5□□□□□ -1.05
RRP43YCR035C DSE3Q08729 430 aa8.5□□□□□ -1.05
RRP43YCR035C GIN4Q12263 1142 aa8.5□□□□□ -1.05
RRP43YCR035C MAM3Q12296 706 aa8.5□□□□□ -1.05
RRP43YCR035C TUS1Q06412 1307 aa8.5□□□□□ -1.05
RRP43YCR035C AI4P03878 556 aa8.49□□□□□ -1.05
RRP43YCR035C STI1P15705 589 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
RRP43YCR035C CBP3P21560 335 aa8.49□□□□□ -1.05
RRP43YCR035C VPS1P21576 704 aaKnown RBP8.49□□□□□ -1.05
RRP43YCR035C RDS1P25611 832 aa8.49□□□□□ -1.05
RRP43YCR035C ULI1P43604 169 aa8.49□□□□□ -1.05
RRP43YCR035C RRT6P53117 311 aaPredicted RBP8.49□□□□□ -1.05
RRP43YCR035C PIL1P53252 339 aaKnown RBP8.49□□□□□ -1.05
RRP43YCR035C HST1P53685 503 aa8.49□□□□□ -1.05
RRP43YCR035C GDE1Q02979 1223 aa8.49□□□□□ -1.05
RRP43YCR035C CIT1P00890 479 aa8.48□□□□□ -1.05
RRP43YCR035C KEX1P09620 729 aa8.48□□□□□ -1.05
RRP43YCR035C TOM71P38825 639 aaKnown RBP8.48□□□□□ -1.05
RRP43YCR035C YEL023CP39992 682 aa8.48□□□□□ -1.05
RRP43YCR035C PEX19Q07418 342 aa8.48□□□□□ -1.05
RRP43YCR035C IOC2Q12072 812 aa8.48□□□□□ -1.05
RRP43YCR035C CDC6P09119 513 aa8.47□□□□□ -1.05
RRP43YCR035C FBP1P09201 348 aa8.47□□□□□ -1.05
RRP43YCR035C MSP1P28737 362 aa8.47□□□□□ -1.05
RRP43YCR035C SOL4P53315 255 aa8.47□□□□□ -1.05
RRP43YCR035C JIP4Q03361 876 aa8.47□□□□□ -1.05
RRP43YCR035C GIS4Q04233 774 aa8.47□□□□□ -1.05
RRP43YCR035C COG8Q04632 607 aa8.47□□□□□ -1.05
RRP43YCR035C SUE1Q06524 206 aa8.47□□□□□ -1.05
RRP43YCR035C PGI1P12709 554 aaKnown RBP8.46□□□□□ -1.06
RRP43YCR035C MBR1P23493 339 aa8.46□□□□□ -1.06
RRP43YCR035C OCT1P35999 772 aa8.46□□□□□ -1.06
RRP43YCR035C HYR1P40581 163 aaKnown RBP8.46□□□□□ -1.06
RRP43YCR035C ASE1P50275 885 aa8.46□□□□□ -1.06
RRP43YCR035C HAP5Q02516 242 aa8.46□□□□□ -1.06
RRP43YCR035C YML037CQ03703 340 aa8.46□□□□□ -1.06
RRP43YCR035C SMD2Q06217 110 aaKnown RBP8.46□□□□□ -1.06
RRP43YCR035C UTP4Q06679 776 aaKnown RBP8.46□□□□□ -1.06
RRP43YCR035C SUB2Q07478 446 aaKnown RBP8.46□□□□□ -1.06
RRP43YCR035C DCS2Q12123 353 aa8.46□□□□□ -1.06
RRP43YCR035C YDJ1P25491 409 aaKnown RBP8.45□□□□□ -1.06
RRP43YCR035C PTC4P38089 393 aa8.45□□□□□ -1.06
RRP43YCR035C TPM2P40414 161 aa8.45□□□□□ -1.06
RRP43YCR035C LYS14P40971 790 aa8.45□□□□□ -1.06
RRP43YCR035C CIR1P42940 261 aa8.45□□□□□ -1.06
RRP43YCR035C YJL007CP47080 104 aa8.45□□□□□ -1.06
RRP43YCR035C LSB1P53281 241 aa8.45□□□□□ -1.06
RRP43YCR035C CSC1Q06538 782 aa8.45□□□□□ -1.06
RRP43YCR035C TYW1Q08960 810 aaKnown RBP8.45□□□□□ -1.06
RRP43YCR035C GET3Q12154 354 aaKnown RBP8.45□□□□□ -1.06
RRP43YCR035C CEX1Q12453 761 aa8.45□□□□□ -1.06
RRP43YCR035C RPL8AP17076 256 aaKnown RBP8.44□□□□□ -1.06
RRP43YCR035C ROX1P25042 368 aa8.44□□□□□ -1.06
RRP43YCR035C SEC20P28791 383 aa8.44□□□□□ -1.06
RRP43YCR035C RAD54P32863 898 aa8.44□□□□□ -1.06
RRP43YCR035C PCS60P38137 543 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06 RIP-Chip
RRP43YCR035C CCT3P39077 534 aaKnown RBP8.44□□□□□ -1.06
RRP43YCR035C YGL138CP53122 345 aa8.44□□□□□ -1.06
RRP43YCR035C VIP1Q06685 1146 aaKnown RBP8.44□□□□□ -1.06
RRP43YCR035C APC11Q12157 165 aa8.44□□□□□ -1.06
RRP43YCR035C NBL1Q3E7Y6 73 aa8.44□□□□□ -1.06
RRP43YCR035C RAD18P10862 487 aa8.43□□□□□ -1.06
RRP43YCR035C FRS2P15625 503 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C RGP1P16664 663 aa8.43□□□□□ -1.06
RRP43YCR035C PWP2P25635 923 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C ASF1P32447 279 aa8.43□□□□□ -1.06
RRP43YCR035C ARL1P38116 183 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C SNF7P39929 240 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C CCT5P40413 562 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C NAF1P53919 492 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C EIS1Q05050 843 aaKnown RBP8.43□□□□□ -1.06
RRP43YCR035C HXK1P04806 485 aaKnown RBP8.42□□□□□ -1.06
RRP43YCR035C PER1P25625 357 aa8.42□□□□□ -1.06
RRP43YCR035C ELM1P32801 640 aa8.42□□□□□ -1.06
RRP43YCR035C NDT80P38830 627 aa8.42□□□□□ -1.06
RRP43YCR035C VAB2P40003 282 aa8.42□□□□□ -1.06
RRP43YCR035C DAN4P47179 1161 aa8.42□□□□□ -1.06
RRP43YCR035C NUP42P49686 430 aaKnown RBP8.42□□□□□ -1.06
RRP43YCR035C FMS1P50264 508 aa8.42□□□□□ -1.06
RRP43YCR035C YNR021WP53723 404 aaKnown RBP8.42□□□□□ -1.06
RRP43YCR035C HVG1P0CE11 249 aa8.41□□□□□ -1.06
RRP43YCR035C MCD4P36051 919 aa8.41□□□□□ -1.06
RRP43YCR035C DID4P36108 232 aa8.41□□□□□ -1.06
RRP43YCR035C BSD2P38356 321 aa8.41□□□□□ -1.06
RRP43YCR035C KIC1P38692 1080 aa8.41□□□□□ -1.06
RRP43YCR035C RSM25P40496 264 aa8.41□□□□□ -1.06
RRP43YCR035C BNI5P53890 448 aaKnown RBP8.41□□□□□ -1.06
RRP43YCR035C FAR11P53917 953 aa8.41□□□□□ -1.06
RRP43YCR035C YNL035CP53962 389 aaKnown RBP8.41□□□□□ -1.06
RRP43YCR035C TRS120Q04183 1289 aa8.41□□□□□ -1.06
RRP43YCR035C CSM3Q04659 317 aa8.41□□□□□ -1.06
RRP43YCR035C UBX5Q06682 500 aa8.41□□□□□ -1.06
RRP43YCR035C THR4P16120 514 aaKnown RBP8.4□□□□□ -1.06
RRP43YCR035C SAS3P34218 831 aa8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms