RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W APT1P49435 187 aaKnown RBP5.01□□□□□ -1.61
VHC1YBR235W RTC4P53850 401 aa5.01□□□□□ -1.61
VHC1YBR235W SLU7Q02775 382 aaKnown RBP5.01□□□□□ -1.61
VHC1YBR235W TAF8Q03750 510 aa5.01□□□□□ -1.61
VHC1YBR235W COA4Q05809 96 aa5.01□□□□□ -1.61
VHC1YBR235W APC5Q08683 685 aa5.01□□□□□ -1.61
VHC1YBR235W UBC1P21734 215 aaKnown RBP5.01□□□□□ -1.61
VHC1YBR235W PEP7P32609 515 aa5.01□□□□□ -1.61
VHC1YBR235W UBP12P39538 1254 aa5.01□□□□□ -1.61
VHC1YBR235W CCT5P40413 562 aaKnown RBP5.01□□□□□ -1.61
VHC1YBR235W YJR079WP47126 109 aa5.01□□□□□ -1.61
VHC1YBR235W ERP6P53198 216 aa5.01□□□□□ -1.61
VHC1YBR235W ESBP6P53918 673 aa5.01□□□□□ -1.61
VHC1YBR235W GCR2Q01722 534 aa5.01□□□□□ -1.61
VHC1YBR235W YLR177WQ06251 628 aa5.01□□□□□ -1.61
VHC1YBR235W YBL113CQ7M4S9 792 aa5.01□□□□□ -1.61
VHC1YBR235W SEN2P16658 377 aa5.01□□□□□ -1.61
VHC1YBR235W NIP100P33420 868 aa5.01□□□□□ -1.61
VHC1YBR235W MRX1P40050 688 aa5.01□□□□□ -1.61
VHC1YBR235W VID27P40157 782 aa5.01□□□□□ -1.61
VHC1YBR235W YIL001WP40560 513 aa5.01□□□□□ -1.61
VHC1YBR235W CTF4Q01454 927 aa5.01□□□□□ -1.61
VHC1YBR235W CWC15Q03772 175 aaKnown RBP5.01□□□□□ -1.61
VHC1YBR235W STE23Q06010 1027 aa5.01□□□□□ -1.61
VHC1YBR235W GPR1Q12361 961 aa5.01□□□□□ -1.61
VHC1YBR235W SSC1P0CS90 654 aaKnown RBP5□□□□□ -1.61
VHC1YBR235W DSF1P0CX08 502 aa5□□□□□ -1.61
VHC1YBR235W YNR073CP0CX09 502 aa5□□□□□ -1.61
VHC1YBR235W BMH2P34730 273 aaKnown RBP5□□□□□ -1.61
VHC1YBR235W APL2P36000 726 aaPredicted RBP5□□□□□ -1.61
VHC1YBR235W TRZ1P36159 838 aaPredicted RBP5□□□□□ -1.61
VHC1YBR235W PTC4P38089 393 aa5□□□□□ -1.61
VHC1YBR235W SPP381P38282 291 aaPredicted RBP5□□□□□ -1.61
VHC1YBR235W YEL023CP39992 682 aa5□□□□□ -1.61
VHC1YBR235W IML2P47031 731 aa5□□□□□ -1.61
VHC1YBR235W UBP3Q01477 912 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VHC1YBR235W TAF12Q03761 539 aa5□□□□□ -1.61
VHC1YBR235W FIN1Q03898 291 aa5□□□□□ -1.61
VHC1YBR235W ATG23Q06671 453 aa5□□□□□ -1.61
VHC1YBR235W PET122P10355 254 aa5□□□□□ -1.61
VHC1YBR235W THR1P17423 357 aaKnown RBP5□□□□□ -1.61
VHC1YBR235W GYP6P32806 458 aa5□□□□□ -1.61
VHC1YBR235W YHR020WP38708 688 aaKnown RBP5□□□□□ -1.61
VHC1YBR235W YHR218WP38899 603 aa5□□□□□ -1.61
VHC1YBR235W ALG2P43636 503 aa5□□□□□ -1.61
VHC1YBR235W TRS85P46944 698 aa5□□□□□ -1.61
VHC1YBR235W SNX4P47057 423 aa5□□□□□ -1.61
VHC1YBR235W SGM1P47166 707 aa5□□□□□ -1.61
VHC1YBR235W IMD4P50094 524 aaKnown RBP5□□□□□ -1.61
VHC1YBR235W AAD16Q02895 342 aa5□□□□□ -1.61
VHC1YBR235W TRS120Q04183 1289 aa5□□□□□ -1.61
VHC1YBR235W SPP382Q06411 708 aaPredicted RBP5□□□□□ -1.61
VHC1YBR235W YBL111CQ3E7Y5 667 aa5□□□□□ -1.61
VHC1YBR235W BMH1P29311 267 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W PEP12P32854 288 aa4.99□□□□□ -1.61
VHC1YBR235W YSW1P38280 609 aa4.99□□□□□ -1.61
VHC1YBR235W RTS3P53289 263 aa4.99□□□□□ -1.61
VHC1YBR235W DIP5P53388 608 aa4.99□□□□□ -1.61
VHC1YBR235W RTT10Q08924 1013 aa4.99□□□□□ -1.61
VHC1YBR235W SGT2Q12118 346 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W DBP10Q12389 995 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W NAT1P12945 854 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W RPO26P20435 155 aa4.99□□□□□ -1.61
VHC1YBR235W RPA135P22138 1203 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W CDC10P25342 322 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W OXP1P28273 1286 aa4.99□□□□□ -1.61
VHC1YBR235W YKL222CP35995 705 aa4.99□□□□□ -1.61
VHC1YBR235W MUD2P36084 527 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W SSF1P38789 453 aaPredicted RBP4.99□□□□□ -1.61
VHC1YBR235W NOC2P39744 710 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W HUL4P40985 892 aa4.99□□□□□ -1.61
VHC1YBR235W MIC19P43594 170 aa4.99□□□□□ -1.61
VHC1YBR235W COP1P53622 1201 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W YKR005CQ02203 525 aa4.99□□□□□ -1.61
VHC1YBR235W DCS1Q06151 350 aa4.99□□□□□ -1.61
VHC1YBR235W SNU66Q12420 587 aaPredicted RBP4.99□□□□□ -1.61
VHC1YBR235W PUF4P25339 888 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
VHC1YBR235W VPH2P32341 215 aa4.99□□□□□ -1.61
VHC1YBR235W STE5P32917 917 aa4.99□□□□□ -1.61
VHC1YBR235W HSP78P33416 811 aa4.99□□□□□ -1.61
VHC1YBR235W AMN1P38285 549 aaPredicted RBP4.99□□□□□ -1.61
VHC1YBR235W OCA5P38738 679 aa4.99□□□□□ -1.61
VHC1YBR235W SCS2P40075 244 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W LAM5P43560 674 aa4.99□□□□□ -1.61
VHC1YBR235W YNL144CP53907 740 aa4.99□□□□□ -1.61
VHC1YBR235W ADA2Q02336 434 aa4.99□□□□□ -1.61
VHC1YBR235W ATP25Q03153 612 aa4.99□□□□□ -1.61
VHC1YBR235W TMA64Q04600 565 aaKnown RBP4.99□□□□□ -1.61
VHC1YBR235W SWI1P09547 1314 aa4.98□□□□□ -1.61
VHC1YBR235W TRP5P00931 707 aaKnown RBP4.98□□□□□ -1.61
VHC1YBR235W ILS1P09436 1072 aaKnown RBP4.98□□□□□ -1.61
VHC1YBR235W CDC16P09798 840 aa4.98□□□□□ -1.61
VHC1YBR235W PRP6P19735 899 aaPredicted RBP4.98□□□□□ -1.61
VHC1YBR235W MSH2P25847 964 aa4.98□□□□□ -1.61
VHC1YBR235W APL1P27351 700 aa4.98□□□□□ -1.61
VHC1YBR235W PLC1P32383 869 aa4.98□□□□□ -1.61
VHC1YBR235W NFU1P32860 256 aa4.98□□□□□ -1.61
VHC1YBR235W HSM3P38348 480 aa4.98□□□□□ -1.61
VHC1YBR235W RTR1P40084 226 aaPredicted RBP4.98□□□□□ -1.61
VHC1YBR235W SSN8P47821 323 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms