RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C ERP6P53198 216 aa6.6□□□□□ -1.35
SEC18YBR080C HXT17P53631 564 aa6.6□□□□□ -1.35
SEC18YBR080C HXT15P54854 567 aa6.6□□□□□ -1.35
SEC18YBR080C TRS130Q03660 1102 aa6.6□□□□□ -1.35
SEC18YBR080C DBP10Q12389 995 aaKnown RBP6.6□□□□□ -1.35
SEC18YBR080C RPS6AP0CX37 236 aaKnown RBP6.6□□□□□ -1.35
SEC18YBR080C RPS6BP0CX38 236 aaPredicted RBP6.6□□□□□ -1.35
SEC18YBR080C SAP185P40856 1058 aa6.6□□□□□ -1.35
SEC18YBR080C ERR3P42222 437 aa6.6□□□□□ -1.35
SEC18YBR080C PBP1P53297 722 aaKnown RBP6.6□□□□□ -1.35
SEC18YBR080C MEP3P53390 489 aa6.6□□□□□ -1.35
SEC18YBR080C CMR1Q12510 522 aaKnown RBP6.6□□□□□ -1.35
SEC18YBR080C COBP00163 385 aa6.59□□□□□ -1.35
SEC18YBR080C SWI5P08153 709 aa6.59□□□□□ -1.35
SEC18YBR080C AAD3P25612 363 aa6.59□□□□□ -1.35
SEC18YBR080C NIC96P34077 839 aa6.59□□□□□ -1.35
SEC18YBR080C CTR9P89105 1077 aa6.59□□□□□ -1.35
SEC18YBR080C ULP1Q02724 621 aa6.59□□□□□ -1.35
SEC18YBR080C TSR2Q06672 205 aaKnown RBP6.59□□□□□ -1.35
SEC18YBR080C TRE2Q08693 809 aa6.59□□□□□ -1.35
SEC18YBR080C HEM13P11353 328 aaKnown RBP6.59□□□□□ -1.36
SEC18YBR080C MRPL33P20084 86 aa6.59□□□□□ -1.36
SEC18YBR080C ARE1P25628 610 aa6.59□□□□□ -1.36
SEC18YBR080C UPF3P48412 387 aaKnown RBP6.59□□□□□ -1.36
SEC18YBR080C SNP1Q00916 300 aaPredicted RBP6.59□□□□□ -1.36
SEC18YBR080C TBF1Q02457 562 aa6.59□□□□□ -1.36
SEC18YBR080C ADI1Q03677 179 aa6.59□□□□□ -1.36
SEC18YBR080C VTI1Q04338 217 aa6.59□□□□□ -1.36
SEC18YBR080C YLR257WQ06146 321 aaKnown RBP6.59□□□□□ -1.36
SEC18YBR080C YCS4Q06156 1176 aa6.59□□□□□ -1.36
SEC18YBR080C SPN1Q06505 410 aaPredicted RBP6.59□□□□□ -1.36
SEC18YBR080C NEW1Q08972 1196 aaKnown RBP6.59□□□□□ -1.36
SEC18YBR080C SPO16P17122 198 aa6.58□□□□□ -1.36
SEC18YBR080C PTH2P34222 208 aa6.58□□□□□ -1.36
SEC18YBR080C RGD2P43556 714 aa6.58□□□□□ -1.36
SEC18YBR080C NIT2P47016 307 aa6.58□□□□□ -1.36
SEC18YBR080C SGM1P47166 707 aa6.58□□□□□ -1.36
SEC18YBR080C SDA1P53313 767 aaKnown RBP6.58□□□□□ -1.36
SEC18YBR080C MLC2Q06580 163 aa6.58□□□□□ -1.36
SEC18YBR080C BRE4Q07660 1125 aa6.58□□□□□ -1.36
SEC18YBR080C TRP2P00899 507 aaKnown RBP6.57□□□□□ -1.36
SEC18YBR080C TOP3P13099 656 aa6.57□□□□□ -1.36
SEC18YBR080C CHS3P29465 1165 aa6.57□□□□□ -1.36
SEC18YBR080C DEF1P35732 738 aaKnown RBP6.57□□□□□ -1.36
SEC18YBR080C APM2P38700 605 aa6.57□□□□□ -1.36
SEC18YBR080C CAJ1P39101 391 aa6.57□□□□□ -1.36
SEC18YBR080C YAP5P40574 245 aa6.57□□□□□ -1.36
SEC18YBR080C YFL034WP43564 1073 aa6.57□□□□□ -1.36
SEC18YBR080C CWH41P53008 833 aa6.57□□□□□ -1.36
SEC18YBR080C KRE33P53914 1056 aaKnown RBP6.57□□□□□ -1.36
SEC18YBR080C CLF1Q12309 687 aaPredicted RBP6.57□□□□□ -1.36
SEC18YBR080C SEC2P17065 759 aa6.57□□□□□ -1.36
SEC18YBR080C MSM1P22438 575 aa6.57□□□□□ -1.36
SEC18YBR080C SMY2P32909 740 aaKnown RBP6.57□□□□□ -1.36
SEC18YBR080C DUR3P33413 735 aa6.57□□□□□ -1.36
SEC18YBR080C BCD1P38772 366 aa6.57□□□□□ -1.36
SEC18YBR080C CCC2P38995 1004 aa6.57□□□□□ -1.36
SEC18YBR080C PGC1Q08959 321 aa6.57□□□□□ -1.36
SEC18YBR080C PUS1Q12211 544 aaKnown RBP6.57□□□□□ -1.36
SEC18YBR080C HSP42Q12329 375 aa6.57□□□□□ -1.36
SEC18YBR080C FLP1P03870 423 aa6.56□□□□□ -1.36
SEC18YBR080C ACA1P39970 489 aa6.56□□□□□ -1.36
SEC18YBR080C HUL4P40985 892 aa6.56□□□□□ -1.36
SEC18YBR080C PEX21P50091 288 aa6.56□□□□□ -1.36
SEC18YBR080C TIM11P81449 96 aaPredicted RBP6.56□□□□□ -1.36
SEC18YBR080C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
SEC18YBR080C VMA8P32610 256 aaKnown RBP6.56□□□□□ -1.36
SEC18YBR080C MRP8P35719 219 aa6.56□□□□□ -1.36
SEC18YBR080C DHR2P36009 735 aaPredicted RBP6.56□□□□□ -1.36
SEC18YBR080C XDJ1P39102 459 aa6.56□□□□□ -1.36
SEC18YBR080C MAM1P40065 302 aa6.56□□□□□ -1.36
SEC18YBR080C HIS6P40545 261 aa6.56□□□□□ -1.36
SEC18YBR080C VPS30Q02948 557 aa6.56□□□□□ -1.36
SEC18YBR080C GIC2Q06648 383 aa6.56□□□□□ -1.36
SEC18YBR080C TY1A-DR4O74302 440 aa6.55□□□□□ -1.36
SEC18YBR080C SPS1P08458 490 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-HP0C2I4 478 aaKnown RBP6.55□□□□□ -1.36
SEC18YBR080C TY1A-AP0CX57 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-PR1P0CX58 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-ORP0CX59 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-PR2P0CX60 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-DR5P0CX65 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-ER2P0CX66 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-GR3P0CX67 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-LR1P0CX68 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-MR2P0CX69 440 aa6.55□□□□□ -1.36
SEC18YBR080C RPP1BP10622 106 aaKnown RBP6.55□□□□□ -1.36
SEC18YBR080C DAL3P32459 195 aa6.55□□□□□ -1.36
SEC18YBR080C HBS1P32769 611 aaKnown RBP6.55□□□□□ -1.36
SEC18YBR080C MOT2P34909 587 aaKnown RBP6.55□□□□□ -1.36
SEC18YBR080C YHR218WP38899 603 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-JR2P47099 440 aa6.55□□□□□ -1.36
SEC18YBR080C PRP43P53131 767 aaKnown RBP6.55□□□□□ -1.36
SEC18YBR080C YAP1802P53309 568 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-DR1Q03856 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-ML1Q04706 440 aaKnown RBP6.55□□□□□ -1.36
SEC18YBR080C TY1A-BRQ12217 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-NL2Q12470 440 aa6.55□□□□□ -1.36
SEC18YBR080C TY1A-GR2Q12485 440 aa6.55□□□□□ -1.36
SEC18YBR080C VAC17P25591 423 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms