RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	APL6	P46682	809 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	JJJ2	P46997	583 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	RET3	P53600	189 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	RTC4	P53850	401 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	ALF1	P53904	254 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	YDR341C	Q05506	607 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	APL4	Q12028	832 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	HIS4	P00815	799 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	SSA1	P10591	642 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	SEC23	P15303	768 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	MAK11	P20484	414 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	MDL2	P33311	773 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	MFT1	P33441	392 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	VID27	P40157	782 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	HPC2	Q01448	625 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	RPT6	Q01939	405 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	CSC1	Q06538	782 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	SFI1	Q12369	946 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	NBL1	Q3E7Y6	73 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	FOB1	O13329	566 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	PDC1	P06169	563 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	MRC1	P25588	1096 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	CDC15	P27636	974 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	SMY1	P32364	656 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	LTV1	P34078	463 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	CCT3	P39077	534 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	AIP1	P46680	615 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	HCR1	Q05775	265 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	SKG3	Q06315	1026 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	DSE3	Q08729	430 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	AFT2	Q08957	416 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	HMI1	Q12039	706 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	CIT1	P00890	479 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	CAF20	P12962	161 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	YET1	P35723	206 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	SHM1	P37292	490 aa	Predicted RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	PCH2	P38126	564 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	STT3	P39007	718 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	CIN4	P39110	191 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	MAL13	P53338	473 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	VPS60	Q03390	229 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	NEW1	Q08972	1196 aa	Known RBP	4.21	□□□□□ -1.74
FAT1	YBR041W	GRX6	Q12438	231 aa		4.21	□□□□□ -1.74
FAT1	YBR041W	TUS1	Q06412	1307 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	FLO11	P08640	1367 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	THR4	P16120	514 aa	Known RBP	4.2	□□□□□ -1.74
FAT1	YBR041W	UBC1	P21734	215 aa	Known RBP	4.2	□□□□□ -1.74
FAT1	YBR041W	RET1	P22276	1149 aa	Known RBP	4.2	□□□□□ -1.74
FAT1	YBR041W	DPB3	P27344	201 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	EFM2	P38347	419 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	ATG32	P40458	529 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	YGR237C	P50089	785 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	CAF130	P53280	1122 aa	Predicted RBP	4.2	□□□□□ -1.74
FAT1	YBR041W	MDM1	Q01846	1127 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	PRP42	Q03776	544 aa	Known RBP	4.2	□□□□□ -1.74
FAT1	YBR041W	VPS38	Q05919	439 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	CST9	Q06032	482 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	PIB1	Q06651	286 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	MCM16	Q12262	181 aa		4.2	□□□□□ -1.74
FAT1	YBR041W	CKA2	P19454	339 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	SAC6	P32599	642 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	SAP190	P36123	1033 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	ERG7	P38604	731 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	CTM1	P38818	585 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	VTC2	P43585	828 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	HFM1	P51979	1187 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	ERG5	P54781	538 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	SML1	Q04964	104 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	EIS1	Q05050	843 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	ACK1	Q07622	623 aa	Predicted RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	PCL8	Q08966	492 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	KEL3	Q08979	651 aa	Predicted RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	NUC1	P08466	329 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
FAT1	YBR041W	RPL8B	P29453	256 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	YEL043W	P32618	956 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	YBL086C	P38177	466 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	MCX1	P38323	520 aa	Predicted RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	MIP6	P38760	659 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	TIF11	P38912	153 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	BUD16	P39988	312 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	EFM4	P40516	257 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	ROG3	P43602	733 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	YJL171C	P46992	396 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	APT1	P49435	187 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	LSC2	P53312	427 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	FOL1	P53848	824 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	BOP3	P53958	396 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	EBS1	Q03466	884 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	GIS4	Q04233	774 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	SUB2	Q07478	446 aa	Known RBP	4.19	□□□□□ -1.74
FAT1	YBR041W	MAM3	Q12296	706 aa		4.19	□□□□□ -1.74
FAT1	YBR041W	QCR6	P00127	147 aa		4.18	□□□□□ -1.74
FAT1	YBR041W	RPS6A	P0CX37	236 aa	Known RBP	4.18	□□□□□ -1.74
FAT1	YBR041W	RPS6B	P0CX38	236 aa	Predicted RBP	4.18	□□□□□ -1.74
FAT1	YBR041W	MIP1	P15801	1254 aa		4.18	□□□□□ -1.74
FAT1	YBR041W	PET123	P17558	318 aa		4.18	□□□□□ -1.74
FAT1	YBR041W	SRM1	P21827	482 aa		4.18	□□□□□ -1.74
FAT1	YBR041W	PRE8	P23639	250 aa		4.18	□□□□□ -1.74
FAT1	YBR041W	SEC20	P28791	383 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms