RNA–Protein interactions for RNA: ENST00000508726.5

CDK7-206, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-206ENST00000508726 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
CDK7-206ENST00000508726 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
CDK7-206ENST00000508726 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
CDK7-206ENST00000508726 RETREG2Q8NC44 543 aa11.03□□□□□ -0.64
CDK7-206ENST00000508726 ABCC10Q5T3U5 1492 aa11.03□□□□□ -0.64
CDK7-206ENST00000508726 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
CDK7-206ENST00000508726 WDR7Q9Y4E6 1490 aa11.03□□□□□ -0.64
CDK7-206ENST00000508726 ATP10BO94823 1461 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
CDK7-206ENST00000508726 ANKLE1Q8NAG6 615 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 NFATC2IPQ8NCF5 419 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 FOXJ1Q92949 421 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
CDK7-206ENST00000508726 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
CDK7-206ENST00000508726 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
CDK7-206ENST00000508726 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
CDK7-206ENST00000508726 SKIP12755 728 aa11□□□□□ -0.65
CDK7-206ENST00000508726 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
CDK7-206ENST00000508726 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
CDK7-206ENST00000508726 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
CDK7-206ENST00000508726 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
CDK7-206ENST00000508726 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
CDK7-206ENST00000508726 TEX14Q8IWB6 1497 aa10.99□□□□□ -0.65
CDK7-206ENST00000508726 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 TRIM32Q13049 653 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 RNF135Q8IUD6 432 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
CDK7-206ENST00000508726 EPRSP07814 1512 aaKnown RBP10.98□□□□□ -0.65
CDK7-206ENST00000508726 USP17L5A8MUK1 530 aa10.97□□□□□ -0.65
CDK7-206ENST00000508726 SH3BP2P78314 561 aa10.97□□□□□ -0.65
CDK7-206ENST00000508726 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
CDK7-206ENST00000508726 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
CDK7-206ENST00000508726 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
CDK7-206ENST00000508726 MTUS2Q5JR59 1369 aa10.97□□□□□ -0.65
CDK7-206ENST00000508726 CD109Q6YHK3 1445 aa10.97□□□□□ -0.65
CDK7-206ENST00000508726 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
CDK7-206ENST00000508726 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
CDK7-206ENST00000508726 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
CDK7-206ENST00000508726 C1QTNF2Q9BXJ5 285 aa10.95□□□□□ -0.66
CDK7-206ENST00000508726 VRTNQ9H8Y1 702 aa10.95□□□□□ -0.66
CDK7-206ENST00000508726 TROQ12816 1431 aaPredicted RBP10.94□□□□□ -0.66
CDK7-206ENST00000508726 CSB-PGBD3P0DP91 1061 aa10.94□□□□□ -0.66
CDK7-206ENST00000508726 PDE4CQ08493 712 aa10.94□□□□□ -0.66
CDK7-206ENST00000508726 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
CDK7-206ENST00000508726 PHTF2Q8N3S3 785 aa10.94□□□□□ -0.66
CDK7-206ENST00000508726 PLPP7Q8NBV4 271 aa10.94□□□□□ -0.66
CDK7-206ENST00000508726 ZCCHC11Q5TAX3 1644 aaKnown RBP10.94□□□□□ -0.66
CDK7-206ENST00000508726 GLI2P10070 1586 aa10.94□□□□□ -0.66
CDK7-206ENST00000508726 WNT7BP56706 349 aa10.93□□□□□ -0.66
CDK7-206ENST00000508726 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
CDK7-206ENST00000508726 NBPF20Q3BBV1 942 aa10.93□□□□□ -0.66
CDK7-206ENST00000508726 DEPDC4Q8N2C3 294 aa10.93□□□□□ -0.66
CDK7-206ENST00000508726 TIAM1Q13009 1591 aa10.93□□□□□ -0.66
CDK7-206ENST00000508726 ATG7O95352 703 aa10.92□□□□□ -0.66
CDK7-206ENST00000508726 RPIAP49247 311 aa10.92□□□□□ -0.66
CDK7-206ENST00000508726 TRMT44Q8IYL2 757 aaKnown RBP10.92□□□□□ -0.66
CDK7-206ENST00000508726 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
CDK7-206ENST00000508726 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
CDK7-206ENST00000508726 SKOR1P84550 965 aa10.91□□□□□ -0.66
CDK7-206ENST00000508726 NCOA4Q13772 614 aa10.91□□□□□ -0.66
CDK7-206ENST00000508726 MAP7D1Q3KQU3 841 aa10.91□□□□□ -0.66
CDK7-206ENST00000508726 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
CDK7-206ENST00000508726 CDV3Q9UKY7 258 aaKnown RBP10.91□□□□□ -0.66
CDK7-206ENST00000508726 USTQ9Y2C2 406 aa10.91□□□□□ -0.66
CDK7-206ENST00000508726 LZTS3O60299 673 aaPredicted RBP10.9□□□□□ -0.66
CDK7-206ENST00000508726 VARSP26640 1264 aaKnown RBP10.9□□□□□ -0.66
CDK7-206ENST00000508726 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
CDK7-206ENST00000508726 CHIC2Q9UKJ5 165 aa10.9□□□□□ -0.66
CDK7-206ENST00000508726 DOLKQ9UPQ8 538 aa10.9□□□□□ -0.66
CDK7-206ENST00000508726 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
CDK7-206ENST00000508726 DIP2BQ9P265 1576 aa10.9□□□□□ -0.67
CDK7-206ENST00000508726 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
CDK7-206ENST00000508726 EML3Q32P44 896 aa10.89□□□□□ -0.67
CDK7-206ENST00000508726 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
CDK7-206ENST00000508726 PCF11O94913 1555 aaKnown RBP10.89□□□□□ -0.67
CDK7-206ENST00000508726 CCNB3Q8WWL7 1395 aa10.89□□□□□ -0.67
CDK7-206ENST00000508726 CD2BP2O95400 341 aaKnown RBP10.88□□□□□ -0.67
CDK7-206ENST00000508726 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
CDK7-206ENST00000508726 EHBP1Q8NDI1 1231 aa10.88□□□□□ -0.67
CDK7-206ENST00000508726 CCDC85AQ96PX6 553 aaPredicted RBP10.88□□□□□ -0.67
CDK7-206ENST00000508726 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
CDK7-206ENST00000508726 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
CDK7-206ENST00000508726 ATP5J2-PTCD1G3V325 749 aa10.87□□□□□ -0.67
CDK7-206ENST00000508726 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
CDK7-206ENST00000508726 NEO1Q92859 1461 aa10.87□□□□□ -0.67
CDK7-206ENST00000508726 PLCH2O75038 1416 aa10.86□□□□□ -0.67
CDK7-206ENST00000508726 ESPNB1AK53 854 aa10.86□□□□□ -0.67
CDK7-206ENST00000508726 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
CDK7-206ENST00000508726 IFFO2Q5TF58 517 aa10.86□□□□□ -0.67
CDK7-206ENST00000508726 SEPT12Q8IYM1 358 aa10.86□□□□□ -0.67
CDK7-206ENST00000508726 KIF14Q15058 1648 aa10.86□□□□□ -0.67
CDK7-206ENST00000508726 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
CDK7-206ENST00000508726 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms