RNA–Protein interactions for RNA: ENST00000508726.5

CDK7-206, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-206ENST00000508726 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
CDK7-206ENST00000508726 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
CDK7-206ENST00000508726 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
CDK7-206ENST00000508726 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
CDK7-206ENST00000508726 PLPPR3Q6T4P5 718 aa21.83■■□□□ 1.09
CDK7-206ENST00000508726 FOXD1Q16676 465 aa20.91■□□□□ 0.94
CDK7-206ENST00000508726 ADRA2BP18089 450 aa20.52■□□□□ 0.88
CDK7-206ENST00000508726 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
CDK7-206ENST00000508726 PIAS4Q8N2W9 510 aaPredicted RBP19.87■□□□□ 0.77
CDK7-206ENST00000508726 KCNA4P22459 653 aa19.4■□□□□ 0.7
CDK7-206ENST00000508726 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
CDK7-206ENST00000508726 MSH5O43196 834 aa19.12■□□□□ 0.65
CDK7-206ENST00000508726 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
CDK7-206ENST00000508726 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
CDK7-206ENST00000508726 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
CDK7-206ENST00000508726 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
CDK7-206ENST00000508726 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
CDK7-206ENST00000508726 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
CDK7-206ENST00000508726 MAPK8IP2Q13387 824 aaPredicted RBP18.46■□□□□ 0.55
CDK7-206ENST00000508726 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
CDK7-206ENST00000508726 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
CDK7-206ENST00000508726 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CDK7-206ENST00000508726 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
CDK7-206ENST00000508726 HOXD11P31277 338 aaPredicted RBP17.93■□□□□ 0.46
CDK7-206ENST00000508726 ZBTB22O15209 634 aa17.85■□□□□ 0.45
CDK7-206ENST00000508726 FOXD4L1Q9NU39 408 aa17.73■□□□□ 0.43
CDK7-206ENST00000508726 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
CDK7-206ENST00000508726 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
CDK7-206ENST00000508726 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
CDK7-206ENST00000508726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDK7-206ENST00000508726 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
CDK7-206ENST00000508726 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
CDK7-206ENST00000508726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
CDK7-206ENST00000508726 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
CDK7-206ENST00000508726 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
CDK7-206ENST00000508726 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
CDK7-206ENST00000508726 APLP2Q06481 763 aa16.59■□□□□ 0.25
CDK7-206ENST00000508726 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
CDK7-206ENST00000508726 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
CDK7-206ENST00000508726 FKBP8Q14318 412 aa16.42■□□□□ 0.22
CDK7-206ENST00000508726 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
CDK7-206ENST00000508726 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
CDK7-206ENST00000508726 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
CDK7-206ENST00000508726 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
CDK7-206ENST00000508726 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
CDK7-206ENST00000508726 CAPN15O75808 1086 aa16.21■□□□□ 0.19
CDK7-206ENST00000508726 POLA2Q14181 598 aa16.07■□□□□ 0.16
CDK7-206ENST00000508726 FBLN2P98095 1184 aa16.02■□□□□ 0.16
CDK7-206ENST00000508726 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
CDK7-206ENST00000508726 ABCB7O75027 752 aa15.93■□□□□ 0.14
CDK7-206ENST00000508726 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
CDK7-206ENST00000508726 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
CDK7-206ENST00000508726 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
CDK7-206ENST00000508726 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
CDK7-206ENST00000508726 DSG3P32926 999 aa15.79■□□□□ 0.12
CDK7-206ENST00000508726 PROM2Q8N271 834 aa15.7■□□□□ 0.1
CDK7-206ENST00000508726 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
CDK7-206ENST00000508726 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
CDK7-206ENST00000508726 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
CDK7-206ENST00000508726 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
CDK7-206ENST00000508726 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
CDK7-206ENST00000508726 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
CDK7-206ENST00000508726 VASPP50552 380 aaPredicted RBP15.47■□□□□ 0.07
CDK7-206ENST00000508726 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
CDK7-206ENST00000508726 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
CDK7-206ENST00000508726 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDK7-206ENST00000508726 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
CDK7-206ENST00000508726 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
CDK7-206ENST00000508726 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
CDK7-206ENST00000508726 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
CDK7-206ENST00000508726 PLCD3Q8N3E9 789 aa15.1■□□□□ 0.01
CDK7-206ENST00000508726 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
CDK7-206ENST00000508726 MIER1Q8N108 512 aa15.04■□□□□ -0
CDK7-206ENST00000508726 SPOCK2Q92563 424 aa15.03■□□□□ -0
CDK7-206ENST00000508726 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
CDK7-206ENST00000508726 PKD2Q13563 968 aa14.96□□□□□ -0.01
CDK7-206ENST00000508726 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
CDK7-206ENST00000508726 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
CDK7-206ENST00000508726 ZBTB47Q9UFB7 747 aaPredicted RBP14.9□□□□□ -0.02
CDK7-206ENST00000508726 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
CDK7-206ENST00000508726 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
CDK7-206ENST00000508726 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
CDK7-206ENST00000508726 ECM2O94769 699 aaPredicted RBP14.8□□□□□ -0.04
CDK7-206ENST00000508726 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
CDK7-206ENST00000508726 CIZ1Q9ULV3 898 aaPredicted RBP14.73□□□□□ -0.05
CDK7-206ENST00000508726 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
CDK7-206ENST00000508726 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
CDK7-206ENST00000508726 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
CDK7-206ENST00000508726 RGL2O15211 777 aa14.62□□□□□ -0.07
CDK7-206ENST00000508726 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
CDK7-206ENST00000508726 NUBP1P53384 320 aa14.59□□□□□ -0.07
CDK7-206ENST00000508726 GSE1Q14687 1217 aa14.59□□□□□ -0.07
CDK7-206ENST00000508726 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
CDK7-206ENST00000508726 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.08
CDK7-206ENST00000508726 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
CDK7-206ENST00000508726 FAM212AQ96EL1 285 aa14.5□□□□□ -0.09
CDK7-206ENST00000508726 BBXQ8WY36 941 aaPredicted RBP14.49□□□□□ -0.09
CDK7-206ENST00000508726 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDK7-206ENST00000508726 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.48□□□□□ -0.09
CDK7-206ENST00000508726 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms