RNA–Protein interactions for RNA: ENST00000460820.6

ATP5C1-204, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

TSL 2

Gene ATP5C1, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-204ENST00000460820 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
ATP5C1-204ENST00000460820 FLT4P35916 1363 aa15.44■□□□□ 0.06
ATP5C1-204ENST00000460820 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
ATP5C1-204ENST00000460820 RCAN3Q9UKA8 241 aa15.43■□□□□ 0.06
ATP5C1-204ENST00000460820 MST1RQ04912 1400 aa15.43■□□□□ 0.06
ATP5C1-204ENST00000460820 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
ATP5C1-204ENST00000460820 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
ATP5C1-204ENST00000460820 AMPHP49418 695 aa15.42■□□□□ 0.06
ATP5C1-204ENST00000460820 TRMT2AQ8IZ69 625 aaKnown RBP15.42■□□□□ 0.06
ATP5C1-204ENST00000460820 CDCA7LQ96GN5 454 aa15.42■□□□□ 0.06
ATP5C1-204ENST00000460820 PSEN1P49768 467 aa15.41■□□□□ 0.06
ATP5C1-204ENST00000460820 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
ATP5C1-204ENST00000460820 DUSP27Q5VZP5 1158 aa15.41■□□□□ 0.06
ATP5C1-204ENST00000460820 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
ATP5C1-204ENST00000460820 RSPH6AQ9H0K4 717 aa15.41■□□□□ 0.06
ATP5C1-204ENST00000460820 FOXO3O43524 673 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 FBLN1P23142 703 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 TMPOP42166 694 aaKnown RBP15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 LCE2DQ5TA82 110 aaPredicted RBP15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 IL16Q14005 1332 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 NPHP3Q7Z494 1330 aa15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
ATP5C1-204ENST00000460820 LMOD3Q0VAK6 560 aa15.39■□□□□ 0.05
ATP5C1-204ENST00000460820 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
ATP5C1-204ENST00000460820 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
ATP5C1-204ENST00000460820 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
ATP5C1-204ENST00000460820 NEUROD2Q15784 382 aa15.38■□□□□ 0.05
ATP5C1-204ENST00000460820 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
ATP5C1-204ENST00000460820 PCDH10Q9P2E7 1040 aa15.38■□□□□ 0.05
ATP5C1-204ENST00000460820 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
ATP5C1-204ENST00000460820 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
ATP5C1-204ENST00000460820 RIPK4P57078 832 aa15.37■□□□□ 0.05
ATP5C1-204ENST00000460820 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
ATP5C1-204ENST00000460820 NFE2L2Q16236 605 aa15.36■□□□□ 0.05
ATP5C1-204ENST00000460820 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
ATP5C1-204ENST00000460820 RGPD1P0DJD0 1748 aa15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 SLIT3O75094 1523 aa15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 SOX12O15370 315 aa15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 RRP1P56182 461 aaKnown RBP15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 PDAP1Q13442 181 aaKnown RBP15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
ATP5C1-204ENST00000460820 LTN1O94822 1766 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 NFAT5O94916 1531 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 HMOX1P09601 288 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 HOXC9P31274 260 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 NUTM2GQ5VZR2 741 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 IP6K1Q92551 441 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 USP19O94966 1318 aa15.34■□□□□ 0.05
ATP5C1-204ENST00000460820 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
ATP5C1-204ENST00000460820 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
ATP5C1-204ENST00000460820 PPP4R2Q9NY27 417 aa15.33■□□□□ 0.04
ATP5C1-204ENST00000460820 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
ATP5C1-204ENST00000460820 GCP02774 474 aa15.32■□□□□ 0.04
ATP5C1-204ENST00000460820 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
ATP5C1-204ENST00000460820 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.32■□□□□ 0.04
ATP5C1-204ENST00000460820 IGSF1Q8N6C5 1336 aa15.31■□□□□ 0.04
ATP5C1-204ENST00000460820 KDRP35968 1356 aa15.31■□□□□ 0.04
ATP5C1-204ENST00000460820 TNS3Q68CZ2 1445 aa15.3■□□□□ 0.04
ATP5C1-204ENST00000460820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.042e-8■□□□□ 11
ATP5C1-204ENST00000460820 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
ATP5C1-204ENST00000460820 PDCD7Q8N8D1 485 aaKnown RBP15.29■□□□□ 0.04
ATP5C1-204ENST00000460820 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
ATP5C1-204ENST00000460820 GNAI1P63096 354 aa15.28■□□□□ 0.04
ATP5C1-204ENST00000460820 XPCQ01831 940 aaPredicted RBP15.28■□□□□ 0.04
ATP5C1-204ENST00000460820 ARHGEF25Q86VW2 580 aa15.28■□□□□ 0.04
ATP5C1-204ENST00000460820 CERKQ8TCT0 537 aa15.28■□□□□ 0.04
ATP5C1-204ENST00000460820 ABCC6O95255 1503 aa15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 PXDNQ92626 1479 aa15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 SPATA31A3Q5VYP0 1347 aa15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 ZNF428Q96B54 188 aa15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 EYA1Q99502 592 aa15.27■□□□□ 0.04
ATP5C1-204ENST00000460820 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.03
ATP5C1-204ENST00000460820 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
ATP5C1-204ENST00000460820 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
ATP5C1-204ENST00000460820 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
ATP5C1-204ENST00000460820 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
ATP5C1-204ENST00000460820 SOS2Q07890 1332 aaPredicted RBP15.24■□□□□ 0.03
ATP5C1-204ENST00000460820 TOM1O60784 492 aa15.24■□□□□ 0.03
ATP5C1-204ENST00000460820 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
ATP5C1-204ENST00000460820 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
ATP5C1-204ENST00000460820 FANCIQ9NVI1 1328 aa15.23■□□□□ 0.03
ATP5C1-204ENST00000460820 MS4A1P11836 297 aa15.23■□□□□ 0.03
ATP5C1-204ENST00000460820 C3orf67Q6ZVT6 689 aa15.23■□□□□ 0.03
ATP5C1-204ENST00000460820 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
ATP5C1-204ENST00000460820 ST18O60284 1047 aa15.22■□□□□ 0.03
ATP5C1-204ENST00000460820 DDX17Q92841 729 aaKnown RBP15.22■□□□□ 0.03
ATP5C1-204ENST00000460820 ZBTB7CA1YPR0 619 aa15.21■□□□□ 0.03
ATP5C1-204ENST00000460820 UBAP1LF5GYI3 381 aa15.21■□□□□ 0.03
ATP5C1-204ENST00000460820 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
ATP5C1-204ENST00000460820 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
ATP5C1-204ENST00000460820 CPDO75976 1380 aa15.21■□□□□ 0.02
ATP5C1-204ENST00000460820 PLEKHG2Q9H7P9 1386 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms