RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 EPAS1Q99814 870 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
C11orf54-202ENST00000354421 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
C11orf54-202ENST00000354421 KCNQ2O43526 872 aa9.84□□□□□ -0.83
C11orf54-202ENST00000354421 CNGB1Q14028 1251 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-202ENST00000354421 CFDP1Q9UEE9 299 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-202ENST00000354421 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-202ENST00000354421 UTRNP46939 3433 aa9.84□□□□□ -0.83
C11orf54-202ENST00000354421 LOC100996750A0A140TA64 210 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 ADAMTS2O95450 1211 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 KCNA6P17658 529 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 BCAMP50895 628 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 EN1Q05925 392 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-202ENST00000354421 FAM161AQ3B820 660 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-202ENST00000354421 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
C11orf54-202ENST00000354421 KRTAP4-6Q9BYQ5 205 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 LAMC1P11047 1609 aa9.83□□□□□ -0.84
C11orf54-202ENST00000354421 APLP1P51693 650 aa9.82□□□□□ -0.84
C11orf54-202ENST00000354421 KCNC4Q03721 635 aa9.82□□□□□ -0.84
C11orf54-202ENST00000354421 KIAA1468Q9P260 1216 aa9.82□□□□□ -0.84
C11orf54-202ENST00000354421 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
C11orf54-202ENST00000354421 TRPM1Q7Z4N2 1603 aa9.81□□□□□ -0.84
C11orf54-202ENST00000354421 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-202ENST00000354421 GFRA3O60609 400 aa9.81□□□□□ -0.84
C11orf54-202ENST00000354421 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-202ENST00000354421 CRBNQ96SW2 442 aa9.81□□□□□ -0.84
C11orf54-202ENST00000354421 NUP155O75694 1391 aa9.81□□□□□ -0.84
C11orf54-202ENST00000354421 CDC42BPAQ5VT25 1732 aa9.81□□□□□ -0.84
C11orf54-202ENST00000354421 PRDM15P57071 1507 aaPredicted RBP9.8□□□□□ -0.84
C11orf54-202ENST00000354421 GPRASP1Q5JY77 1395 aa9.8□□□□□ -0.84
C11orf54-202ENST00000354421 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
C11orf54-202ENST00000354421 LRRC59Q96AG4 307 aaKnown RBP9.79□□□□□ -0.84
C11orf54-202ENST00000354421 PRAG1Q86YV5 1406 aa9.79□□□□□ -0.84
C11orf54-202ENST00000354421 GGT6Q6P531 493 aa9.79□□□□□ -0.84
C11orf54-202ENST00000354421 JMYQ8N9B5 988 aa9.79□□□□□ -0.84
C11orf54-202ENST00000354421 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
C11orf54-202ENST00000354421 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
C11orf54-202ENST00000354421 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
C11orf54-202ENST00000354421 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
C11orf54-202ENST00000354421 WBP1LQ9NX94 342 aa9.78□□□□□ -0.84
C11orf54-202ENST00000354421 ARHGEF5Q12774 1597 aa9.78□□□□□ -0.84
C11orf54-202ENST00000354421 SPHKAPQ2M3C7 1700 aa9.77□□□□□ -0.84
C11orf54-202ENST00000354421 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
C11orf54-202ENST00000354421 CENPQQ7L2Z9 268 aaPredicted RBP9.77□□□□□ -0.85
C11orf54-202ENST00000354421 SHANK3Q9BYB0 1731 aa9.77□□□□□ -0.85
C11orf54-202ENST00000354421 DCAF11Q8TEB1 546 aa9.76□□□□□ -0.85
C11orf54-202ENST00000354421 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-202ENST00000354421 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
C11orf54-202ENST00000354421 PNPLA6Q8IY17 1366 aa9.76□□□□□ -0.85
C11orf54-202ENST00000354421 PLIN1O60240 522 aa9.76□□□□□ -0.85
C11orf54-202ENST00000354421 KDM2AQ9Y2K7 1162 aa9.76□□□□□ -0.85
C11orf54-202ENST00000354421 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
C11orf54-202ENST00000354421 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
C11orf54-202ENST00000354421 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
C11orf54-202ENST00000354421 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
C11orf54-202ENST00000354421 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-202ENST00000354421 ZNF777Q9ULD5 760 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-202ENST00000354421 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
C11orf54-202ENST00000354421 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 TESK2Q96S53 571 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 BRPF3Q9ULD4 1205 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
C11orf54-202ENST00000354421 LTKP29376 864 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 EZH2Q15910 746 aaKnown RBP9.73□□□□□ -0.85
C11orf54-202ENST00000354421 BRINP3Q76B58 766 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 FRAT1Q92837 279 aaPredicted RBP9.73□□□□□ -0.85
C11orf54-202ENST00000354421 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
C11orf54-202ENST00000354421 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
C11orf54-202ENST00000354421 A2MP01023 1474 aa9.72□□□□□ -0.85
C11orf54-202ENST00000354421 DISP2A7MBM2 1401 aa9.72□□□□□ -0.85
C11orf54-202ENST00000354421 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
C11orf54-202ENST00000354421 C20orf194Q5TEA3 1177 aa9.72□□□□□ -0.85
C11orf54-202ENST00000354421 ZNF521Q96K83 1311 aa9.72□□□□□ -0.85
C11orf54-202ENST00000354421 TSPY4P0CV99 314 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 TSPY10P0CW01 314 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 DUSP27Q5VZP5 1158 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 KRT27Q7Z3Y8 459 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 SKAP1Q86WV1 359 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 SEPT12Q8IYM1 358 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.71□□□□□ -0.85
C11orf54-202ENST00000354421 CCDC141Q6ZP82 1450 aa9.71□□□□□ -0.85
C11orf54-202ENST00000354421 CCDC144AA2RUR9 1427 aa9.71□□□□□ -0.86
C11orf54-202ENST00000354421 PTCH1Q13635 1447 aa9.71□□□□□ -0.86
C11orf54-202ENST00000354421 EIF3AQ14152 1382 aaKnown RBP9.7□□□□□ -0.86
C11orf54-202ENST00000354421 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
C11orf54-202ENST00000354421 CADPS2Q86UW7 1296 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 KLRG1Q96E93 195 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 SYT17Q9BSW7 474 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 PANK3Q9H999 370 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 BRWD3Q6RI45 1802 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
C11orf54-202ENST00000354421 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
C11orf54-202ENST00000354421 MAST1Q9Y2H9 1570 aa9.69□□□□□ -0.86
C11orf54-202ENST00000354421 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms