RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 GIGYF2Q6Y7W6 1299 aaKnown RBP15.17■□□□□ 0.02
LRTM1-201ENST00000273286 CPS1P31327 1500 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 UGGT1Q9NYU2 1555 aa15.16■□□□□ 0.02
LRTM1-201ENST00000273286 UBAP1LF5GYI3 381 aa15.16■□□□□ 0.02
LRTM1-201ENST00000273286 GDF9O60383 454 aa15.15■□□□□ 0.02
LRTM1-201ENST00000273286 MMP16P51512 607 aa15.15■□□□□ 0.02
LRTM1-201ENST00000273286 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
LRTM1-201ENST00000273286 NEURL4Q96JN8 1562 aa15.14■□□□□ 0.01
LRTM1-201ENST00000273286 MED14O60244 1454 aa15.14■□□□□ 0.01
LRTM1-201ENST00000273286 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
LRTM1-201ENST00000273286 ABCC3O15438 1527 aa15.13■□□□□ 0.01
LRTM1-201ENST00000273286 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
LRTM1-201ENST00000273286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.01
LRTM1-201ENST00000273286 TRIM66O15016 1216 aa15.12■□□□□ 0.01
LRTM1-201ENST00000273286 DXOO77932 396 aaKnown RBP15.12■□□□□ 0.01
LRTM1-201ENST00000273286 FOXC1Q12948 553 aa15.12■□□□□ 0.01
LRTM1-201ENST00000273286 SYMPKQ92797 1274 aaKnown RBP15.12■□□□□ 0.01
LRTM1-201ENST00000273286 SHANK2Q9UPX8 1470 aa15.12■□□□□ 0.01
LRTM1-201ENST00000273286 ZBTB24O43167 697 aaPredicted RBP15.11■□□□□ 0.01
LRTM1-201ENST00000273286 CD2BP2O95400 341 aaKnown RBP15.11■□□□□ 0.01
LRTM1-201ENST00000273286 FDX1P10109 184 aa15.11■□□□□ 0.01
LRTM1-201ENST00000273286 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
LRTM1-201ENST00000273286 SPIRE2Q8WWL2 714 aa15.11■□□□□ 0.01
LRTM1-201ENST00000273286 AK7Q96M32 723 aa15.11■□□□□ 0.01
LRTM1-201ENST00000273286 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
LRTM1-201ENST00000273286 TOM1O60784 492 aa15.1■□□□□ 0.01
LRTM1-201ENST00000273286 PARP9Q8IXQ6 854 aa15.1■□□□□ 0.01
LRTM1-201ENST00000273286 NPHP4O75161 1426 aaPredicted RBP15.1■□□□□ 0.01
LRTM1-201ENST00000273286 ERBINQ96RT1 1412 aa15.1■□□□□ 0.01
LRTM1-201ENST00000273286 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
LRTM1-201ENST00000273286 PKDCCQ504Y2 493 aa15.09■□□□□ 0.01
LRTM1-201ENST00000273286 PKD2L1Q9P0L9 805 aa15.09■□□□□ 0.01
LRTM1-201ENST00000273286 ARHGAP31Q2M1Z3 1444 aa15.08■□□□□ 0.01
LRTM1-201ENST00000273286 MROH1Q8NDA8 1641 aa15.08■□□□□ 0
LRTM1-201ENST00000273286 SOCS7O14512 581 aa15.08■□□□□ 0
LRTM1-201ENST00000273286 BEGAINQ9BUH8 593 aa15.08■□□□□ 0
LRTM1-201ENST00000273286 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
LRTM1-201ENST00000273286 FAM187AA6NFU0 413 aa15.07■□□□□ 0
LRTM1-201ENST00000273286 PCDHGC3Q9UN70 934 aa15.07■□□□□ 0
LRTM1-201ENST00000273286 KIF15Q9NS87 1388 aa15.07■□□□□ 0
LRTM1-201ENST00000273286 IQGAP1P46940 1657 aa15.07■□□□□ 0
LRTM1-201ENST00000273286 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
LRTM1-201ENST00000273286 NDUFV2P19404 249 aa15.06■□□□□ 0
LRTM1-201ENST00000273286 RETREG3Q86VR2 466 aa15.06■□□□□ 0
LRTM1-201ENST00000273286 VWDEQ8N2E2 1590 aa15.06■□□□□ 0
LRTM1-201ENST00000273286 MOXD2PA6NHM9 499 aa15.05■□□□□ -0
LRTM1-201ENST00000273286 C6orf229H3BNL8 230 aa15.05■□□□□ -0
LRTM1-201ENST00000273286 JUNDP17535 347 aa15.05■□□□□ -0
LRTM1-201ENST00000273286 CCDC24Q8N4L8 307 aa15.05■□□□□ -0
LRTM1-201ENST00000273286 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
LRTM1-201ENST00000273286 KANK1Q14678 1352 aa15.04■□□□□ -0
LRTM1-201ENST00000273286 DGAT1O75907 488 aa15.04■□□□□ -0
LRTM1-201ENST00000273286 ILDR2Q71H61 639 aa15.04■□□□□ -0
LRTM1-201ENST00000273286 ABCC5O15440 1437 aa15.03■□□□□ -0
LRTM1-201ENST00000273286 CEP152O94986 1710 aa15.03■□□□□ -0
LRTM1-201ENST00000273286 TRIM32Q13049 653 aa15.03■□□□□ -0
LRTM1-201ENST00000273286 DAPK1P53355 1430 aa15.03■□□□□ -0
LRTM1-201ENST00000273286 SYNMO15061 1565 aa15.02■□□□□ -0
LRTM1-201ENST00000273286 UBR1Q8IWV7 1749 aa15.02□□□□□ -0.01
LRTM1-201ENST00000273286 FGD6Q6ZV73 1430 aa15.02□□□□□ -0.01
LRTM1-201ENST00000273286 ANKRD30AQ9BXX3 1397 aa15.02□□□□□ -0.01
LRTM1-201ENST00000273286 MS4A1P11836 297 aa15.01□□□□□ -0.01
LRTM1-201ENST00000273286 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
LRTM1-201ENST00000273286 SLIT1O75093 1534 aa15.01□□□□□ -0.01
LRTM1-201ENST00000273286 SLC24A3Q9HC58 644 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 RRP7BPQ9NSQ0 103 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 ARHGAP23Q9P227 1491 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 PIP4K2BP78356 416 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 MYT1Q01538 1121 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 TBC1D2Q9BYX2 928 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 EID1Q9Y6B2 187 aa15□□□□□ -0.01
LRTM1-201ENST00000273286 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
LRTM1-201ENST00000273286 KDM5AP29375 1690 aaKnown RBP14.98□□□□□ -0.01
LRTM1-201ENST00000273286 PDE4DQ08499 809 aa14.98□□□□□ -0.01
LRTM1-201ENST00000273286 CFAP65Q6ZU64 1925 aaKnown RBP14.97□□□□□ -0.01
LRTM1-201ENST00000273286 HSPA1LP34931 641 aa14.97□□□□□ -0.01
LRTM1-201ENST00000273286 CYP4X1Q8N118 509 aa14.97□□□□□ -0.01
LRTM1-201ENST00000273286 LRRC7Q96NW7 1537 aa14.97□□□□□ -0.01
LRTM1-201ENST00000273286 DIXDC1Q155Q3 683 aa14.96□□□□□ -0.01
LRTM1-201ENST00000273286 TXNDC2Q86VQ3 553 aa14.96□□□□□ -0.01
LRTM1-201ENST00000273286 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
LRTM1-201ENST00000273286 TOR4AQ9NXH8 423 aa14.95□□□□□ -0.02
LRTM1-201ENST00000273286 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
LRTM1-201ENST00000273286 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
LRTM1-201ENST00000273286 WNT7AO00755 349 aa14.94□□□□□ -0.02
LRTM1-201ENST00000273286 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
LRTM1-201ENST00000273286 MTMR2Q13614 643 aa14.93□□□□□ -0.02
LRTM1-201ENST00000273286 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
LRTM1-201ENST00000273286 EFCAB6Q5THR3 1501 aa14.93□□□□□ -0.02
LRTM1-201ENST00000273286 PIK3C2BO00750 1634 aa14.93□□□□□ -0.02
LRTM1-201ENST00000273286 LTKP29376 864 aa14.92□□□□□ -0.02
LRTM1-201ENST00000273286 PRR7Q8TB68 274 aa14.92□□□□□ -0.02
LRTM1-201ENST00000273286 STRCP1A6NGW2 1772 aa14.92□□□□□ -0.02
LRTM1-201ENST00000273286 MED1Q15648 1581 aaPredicted RBP14.92□□□□□ -0.02
LRTM1-201ENST00000273286 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
LRTM1-201ENST00000273286 SLC52A1Q9NWF4 448 aa14.92□□□□□ -0.02
LRTM1-201ENST00000273286 ALKQ9UM73 1620 aa14.91□□□□□ -0.02
LRTM1-201ENST00000273286 TTC24A2A3L6 582 aaPredicted RBP14.91□□□□□ -0.02
LRTM1-201ENST00000273286 BCANQ96GW7 911 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms