RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Q9D2X8 372 aa14.19□□□□□ -0.14
Vps54-202ENSMUST00000109578 Anapc15-psA0A140T8L6 141 aa14.18□□□□□ -0.14
Vps54-202ENSMUST00000109578 PtpruB1AUH1 1446 aa14.18□□□□□ -0.14
Vps54-202ENSMUST00000109578 Aldh1l2Q8K009 923 aa14.18□□□□□ -0.14
Vps54-202ENSMUST00000109578 Kif20aP97329 887 aa14.18□□□□□ -0.14
Vps54-202ENSMUST00000109578 Sox12Q04890 314 aa14.18□□□□□ -0.14
Vps54-202ENSMUST00000109578 Rasa1E9PYG6 1038 aa14.17□□□□□ -0.14
Vps54-202ENSMUST00000109578 Bcar3Q9QZK2 820 aa14.17□□□□□ -0.14
Vps54-202ENSMUST00000109578 Rsph4aQ8BYM7 716 aa14.16□□□□□ -0.14
Vps54-202ENSMUST00000109578 Gtf2a1Q99PM3 378 aa14.16□□□□□ -0.14
Vps54-202ENSMUST00000109578 Cyp46a1Q9WVK8 500 aa14.16□□□□□ -0.14
Vps54-202ENSMUST00000109578 Prune1Q8BIW1 454 aa14.16□□□□□ -0.14
Vps54-202ENSMUST00000109578 Fam83gQ5SWY7 812 aa14.15□□□□□ -0.14
Vps54-202ENSMUST00000109578 NpatQ8BMA5 1420 aa14.15□□□□□ -0.14
Vps54-202ENSMUST00000109578 Hoxb7P09024 217 aa14.15□□□□□ -0.14
Vps54-202ENSMUST00000109578 Sv2bQ8BG39 683 aa14.15□□□□□ -0.14
Vps54-202ENSMUST00000109578 4930407I10RikD3Z5T8 1512 aa14.15□□□□□ -0.14
Vps54-202ENSMUST00000109578 Mcm2P97310 904 aa14.15□□□□□ -0.14
Vps54-202ENSMUST00000109578 Trim44Q9QXA7 346 aa14.14□□□□□ -0.15
Vps54-202ENSMUST00000109578 Phf23Q8BSN5 401 aa14.14□□□□□ -0.15
Vps54-202ENSMUST00000109578 Tmx3Q8BXZ1 456 aa14.14□□□□□ -0.15
Vps54-202ENSMUST00000109578 Cyp27a1Q9DBG1 533 aa14.14□□□□□ -0.15
Vps54-202ENSMUST00000109578 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.14□□□□□ -0.15
Vps54-202ENSMUST00000109578 Plppr3Q7TPB0 716 aa14.14□□□□□ -0.15
Vps54-202ENSMUST00000109578 Gdpd2Q9ESM6 539 aa14.13□□□□□ -0.15
Vps54-202ENSMUST00000109578 Gemin5Q8BX17 1502 aaKnown RBP14.13□□□□□ -0.15
Vps54-202ENSMUST00000109578 Rtf1A2AQ19 715 aaKnown RBP14.13□□□□□ -0.15
Vps54-202ENSMUST00000109578 Zkscan1Q8BGS3 561 aaKnown RBP14.13□□□□□ -0.15
Vps54-202ENSMUST00000109578 Kif1aP33173 1695 aa14.13□□□□□ -0.15
Vps54-202ENSMUST00000109578 Kif20bQ80WE4 1774 aaKnown RBP14.13□□□□□ -0.15
Vps54-202ENSMUST00000109578 Irx6Q9ER75 438 aa14.12□□□□□ -0.15
Vps54-202ENSMUST00000109578 Dip2aQ8BWT5 1523 aa14.12□□□□□ -0.15
Vps54-202ENSMUST00000109578 Nckap5lQ6GQX2 1323 aa14.12□□□□□ -0.15
Vps54-202ENSMUST00000109578 Pik3c2bE9QAN8 1632 aa14.12□□□□□ -0.15
Vps54-202ENSMUST00000109578 Zc3h13E9Q784 1729 aaKnown RBP14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Zdhhc9P59268 364 aa14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Srgap3Q812A2 1099 aa14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Cabp4Q8VHC5 271 aa14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Tnnt1O88346 262 aa14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Q3UJC8 639 aa14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Zkscan16A2ALW2 728 aa14.11□□□□□ -0.15
Vps54-202ENSMUST00000109578 Eya1P97767 591 aa14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Q3TQI7 289 aaKnown RBP14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Erc2Q6PH08 957 aa14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Hmox1P14901 289 aa14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Isy1Q69ZQ2 285 aaKnown RBP14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Ppp1r42Q8R1Z4 357 aa14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Dnajc5gQ8C632 165 aa14.1□□□□□ -0.15
Vps54-202ENSMUST00000109578 Elp1Q7TT37 1333 aaKnown RBP14.09□□□□□ -0.15
Vps54-202ENSMUST00000109578 Mdc1Q5PSV9 1707 aa14.09□□□□□ -0.15
Vps54-202ENSMUST00000109578 Ccne1Q61457 408 aa14.09□□□□□ -0.15
Vps54-202ENSMUST00000109578 RestQ8VIG1 1082 aa14.09□□□□□ -0.15
Vps54-202ENSMUST00000109578 Gm9992B2RWK3 458 aa14.08□□□□□ -0.15
Vps54-202ENSMUST00000109578 Unc93aQ710D3 458 aa14.08□□□□□ -0.15
Vps54-202ENSMUST00000109578 Tshz3Q8CGV9 1081 aa14.08□□□□□ -0.15
Vps54-202ENSMUST00000109578 Gm21190A0A0G2JGJ6 266 aa14.08□□□□□ -0.16
Vps54-202ENSMUST00000109578 Gnai2P08752 355 aaKnown RBP14.08□□□□□ -0.16
Vps54-202ENSMUST00000109578 Astn2Q80Z10 1352 aa14.08□□□□□ -0.16
Vps54-202ENSMUST00000109578 Phactr2B1AVP0 632 aa14.08□□□□□ -0.16
Vps54-202ENSMUST00000109578 Nphp1Q9QY53 687 aa14.08□□□□□ -0.16
Vps54-202ENSMUST00000109578 Dip2bQ3UH60 1574 aa14.08□□□□□ -0.16
Vps54-202ENSMUST00000109578 Parp14Q2EMV9 1817 aa14.07□□□□□ -0.16
Vps54-202ENSMUST00000109578 PtmaP26350 111 aa14.07□□□□□ -0.16
Vps54-202ENSMUST00000109578 Cwc27Q3TKY6 469 aa14.07□□□□□ -0.16
Vps54-202ENSMUST00000109578 Ptpdc1Q6NZK8 747 aa14.07□□□□□ -0.16
Vps54-202ENSMUST00000109578 Gadd45bP22339 160 aa14.07□□□□□ -0.16
Vps54-202ENSMUST00000109578 Dennd6aQ8BH65 605 aa14.07□□□□□ -0.16
Vps54-202ENSMUST00000109578 Adgrb1Q3UHD1 1582 aa14.06□□□□□ -0.16
Vps54-202ENSMUST00000109578 Idi1P58044 227 aa14.06□□□□□ -0.16
Vps54-202ENSMUST00000109578 Rrp9Q91WM3 475 aaKnown RBP14.06□□□□□ -0.16
Vps54-202ENSMUST00000109578 Erich6bQ9D4S6 220 aa14.06□□□□□ -0.16
Vps54-202ENSMUST00000109578 Hsp90b1P08113 802 aaKnown RBP14.06□□□□□ -0.16
Vps54-202ENSMUST00000109578 Nlgn1Q99K10 843 aa14.05□□□□□ -0.16
Vps54-202ENSMUST00000109578 PogkQ80TC5 607 aa14.05□□□□□ -0.16
Vps54-202ENSMUST00000109578 Zkscan2G3X952 960 aa14.05□□□□□ -0.16
Vps54-202ENSMUST00000109578 Cpa2Q504N0 417 aa14.05□□□□□ -0.16
Vps54-202ENSMUST00000109578 FancaQ9JL70 1439 aa14.05□□□□□ -0.16
Vps54-202ENSMUST00000109578 Tnrc6bQ8BKI2 1810 aaKnown RBP14.05□□□□□ -0.16
Vps54-202ENSMUST00000109578 NexnQ7TPW1 607 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 Cyp2d12Q8BVD2 504 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 PzpQ61838 1495 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 Cps1Q8C196 1500 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 Mrps27Q8BK72 415 aaKnown RBP14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 RictorQ6QI06 1708 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 Mmp8O70138 465 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 Tmem132eQ6IEE6 982 aa14.04□□□□□ -0.16
Vps54-202ENSMUST00000109578 Chpf2Q3UU43 768 aa14.03□□□□□ -0.16
Vps54-202ENSMUST00000109578 4931400O07RikQ9D4M5 137 aa14.03□□□□□ -0.16
Vps54-202ENSMUST00000109578 Zfp777B9EKF4 885 aa14.03□□□□□ -0.16
Vps54-202ENSMUST00000109578 Dhx16G3X8X0 1044 aaKnown RBP14.03□□□□□ -0.16
Vps54-202ENSMUST00000109578 Syce3B5KM66 88 aa14.03□□□□□ -0.16
Vps54-202ENSMUST00000109578 ImpactO55091 318 aa14.03□□□□□ -0.16
Vps54-202ENSMUST00000109578 Vwa3bJ9JI28 736 aa14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Rrp12Q6P5B0 1295 aaKnown RBP14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Pknox2Q8BG99 474 aa14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Med1Q925J9 1575 aa14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Tet3Q8BG87 1668 aa14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Tpx2A2APB8 745 aaKnown RBP14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Rbm27Q5SFM8 1060 aaKnown RBP14.02□□□□□ -0.16
Vps54-202ENSMUST00000109578 Foxp4Q9DBY0 795 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms