RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Trpm3Q5F4S9 1721 aa9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 Ttll13A4Q9F6 804 aa9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 Plekhm2Q80TQ5 1018 aa9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 Smc5Q8CG46 1101 aaKnown RBP9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 Siglec1Q62230 1695 aa9.6□□□□□ -0.87
Trim40-201ENSMUST00000087158 Duxf3A0A0N4SV92 674 aa9.6□□□□□ -0.87
Trim40-201ENSMUST00000087158 Gm6268A2A3U9 297 aa9.6□□□□□ -0.87
Trim40-201ENSMUST00000087158 Atf3Q60765 181 aa9.6□□□□□ -0.87
Trim40-201ENSMUST00000087158 Cavin2Q63918 418 aaKnown RBP9.6□□□□□ -0.87
Trim40-201ENSMUST00000087158 Tmem132eQ6IEE6 982 aa9.6□□□□□ -0.87
Trim40-201ENSMUST00000087158 Fmnl2A2APV2 1086 aa9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 Rtf1A2AQ19 715 aaKnown RBP9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 HypkQ9CR41 129 aa9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 Chmp5Q9D7S9 219 aa9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 Nkx1-2P42580 305 aa9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 Gsdma3Q5Y4Y6 464 aa9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 U2surpQ6NV83 1029 aaKnown RBP9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 KarsQ99MN1 595 aaKnown RBP9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 EspnQ9ET47 871 aa9.59□□□□□ -0.87
Trim40-201ENSMUST00000087158 Kdm6aO70546 1401 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Ppp1r37Q8BKR5 712 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Aldh1l1Q8R0Y6 902 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Arfgef2A2A5R2 1792 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Tet3Q8BG87 1668 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Nsd3Q6P2L6 1439 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Tmco5bQ80X59 307 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 Ppp1r3fQ9JIG4 799 aa9.58□□□□□ -0.88
Trim40-201ENSMUST00000087158 ChgaP26339 463 aaKnown RBP9.57□□□□□ -0.88
Trim40-201ENSMUST00000087158 GnpatP98192 678 aa9.57□□□□□ -0.88
Trim40-201ENSMUST00000087158 Q3UPC7 1272 aa9.57□□□□□ -0.88
Trim40-201ENSMUST00000087158 Gtf3c5Q8R2T8 520 aa9.57□□□□□ -0.88
Trim40-201ENSMUST00000087158 Klhdc4Q921I2 584 aa9.57□□□□□ -0.88
Trim40-201ENSMUST00000087158 Dnajc10Q9DC23 793 aa9.57□□□□□ -0.88
Trim40-201ENSMUST00000087158 Irx3P81067 507 aa9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Maco1Q7TQE6 664 aaKnown RBP9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Rlbp1Q9Z275 317 aa9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Ahnak2E9PYB0 1738 aaKnown RBP9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Nectin2P32507 530 aa9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Dzip1Q8BMD2 852 aa9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Plcd4Q8K3R3 807 aa9.56□□□□□ -0.88
Trim40-201ENSMUST00000087158 Adgrb1Q3UHD1 1582 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 TnrQ8BYI9 1358 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 MpndQ3TV65 487 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 MarsQ68FL6 902 aaKnown RBP9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 B4galnt3Q6L8S8 986 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Dixdc1Q80Y83 711 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Znf330Q922H9 316 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Amotl1Q9D4H4 968 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Chmp4bQ9D8B3 224 aaKnown RBP9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Amigo3Q8C2S7 508 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 BccipQ9CWI3 316 aa9.55□□□□□ -0.88
Trim40-201ENSMUST00000087158 Rangap1P46061 589 aaKnown RBP9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 Chl1P70232 1209 aa9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 Hs1bp3Q3TC93 395 aa9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 Ggnbp2Q5SV77 696 aa9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 GapdhsQ64467 440 aa9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 Amotl2Q8K371 772 aa9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 Igsf1Q7TQA1 1317 aa9.54□□□□□ -0.88
Trim40-201ENSMUST00000087158 DccP70211 1447 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 G430095P16RikE9Q913 147 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Snap23O09044 210 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Prim1P20664 417 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Atl3Q91YH5 541 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Dbr1Q923B1 550 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Nid2O88322 1403 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Nol11Q8BJW5 723 aaKnown RBP9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Foxp4Q9DBY0 795 aaKnown RBP9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 MvpQ9EQK5 861 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Myo5bP21271 1818 aa9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 Nup153E9Q3G8 1462 aaKnown RBP9.53□□□□□ -0.88
Trim40-201ENSMUST00000087158 1700019A02RikA0A087WPV9 146 aa9.52□□□□□ -0.89
Trim40-201ENSMUST00000087158 Ankrd44B2RXR6 993 aa9.52□□□□□ -0.89
Trim40-201ENSMUST00000087158 Mkrn3Q60764 544 aa9.52□□□□□ -0.89
Trim40-201ENSMUST00000087158 Nutm1Q8BHP2 1126 aa9.52□□□□□ -0.89
Trim40-201ENSMUST00000087158 Spock2Q9ER58 423 aa9.52□□□□□ -0.89
Trim40-201ENSMUST00000087158 Pibf1E9Q6K3 756 aa9.51□□□□□ -0.89
Trim40-201ENSMUST00000087158 Ddx17Q501J6 650 aaKnown RBP9.51□□□□□ -0.89
Trim40-201ENSMUST00000087158 Ric3Q8BPM6 367 aa9.51□□□□□ -0.89
Trim40-201ENSMUST00000087158 TkfcQ8VC30 578 aa9.51□□□□□ -0.89
Trim40-201ENSMUST00000087158 Ipo4Q8VI75 1082 aa9.51□□□□□ -0.89
Trim40-201ENSMUST00000087158 Simc1E9Q6E9 1354 aa9.51□□□□□ -0.89
Trim40-201ENSMUST00000087158 Card10P58660 1021 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Mre11Q61216 706 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Pdlim2Q8R1G6 349 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Abcc12Q80WJ6 1366 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Gm21698A0A087WQP8 267 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Gm21671G3UY31 267 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Brinp3Q499E0 766 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Kif24Q6NWW5 1356 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Bcl9lQ67FY2 1494 aa9.5□□□□□ -0.89
Trim40-201ENSMUST00000087158 Ubap1lG3UW59 384 aa9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Q3TQI7 289 aaKnown RBP9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Msh6P54276 1358 aaKnown RBP9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Abca15E9PWH4 1668 aa9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Col15a1O35206 1367 aa9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 CanxP35564 591 aaKnown RBP9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Aldh1l2Q8K009 923 aa9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Armcx1Q9CX83 456 aa9.49□□□□□ -0.89
Trim40-201ENSMUST00000087158 Sv2bQ8BG39 683 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms