RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Brwd3A2AHJ4 1799 aa29.11■■■□□ 2.25
Cln6-201ENSMUST00000034776 Ric3Q8BPM6 367 aa29.11■■■□□ 2.25
Cln6-201ENSMUST00000034776 Foxp4Q9DBY0 795 aaKnown RBP29.11■■■□□ 2.25
Cln6-201ENSMUST00000034776 1700019A02RikA0A087WPV9 146 aa29.11■■■□□ 2.25
Cln6-201ENSMUST00000034776 GnpatP98192 678 aa29.1■■■□□ 2.25
Cln6-201ENSMUST00000034776 Amotl2Q8K371 772 aa29.1■■■□□ 2.25
Cln6-201ENSMUST00000034776 Amotl1Q9D4H4 968 aa29.1■■■□□ 2.25
Cln6-201ENSMUST00000034776 Kif24Q6NWW5 1356 aa29.1■■■□□ 2.25
Cln6-201ENSMUST00000034776 Atf3Q60765 181 aa29.09■■■□□ 2.25
Cln6-201ENSMUST00000034776 Nup153E9Q3G8 1462 aaKnown RBP29.09■■■□□ 2.25
Cln6-201ENSMUST00000034776 TnrQ8BYI9 1358 aa29.09■■■□□ 2.25
Cln6-201ENSMUST00000034776 Ppp2r3aB2RXC8 1150 aa29.08■■■□□ 2.25
Cln6-201ENSMUST00000034776 Dzip1Q8BMD2 852 aa29.08■■■□□ 2.25
Cln6-201ENSMUST00000034776 Nid2O88322 1403 aa29.08■■■□□ 2.25
Cln6-201ENSMUST00000034776 Pibf1E9Q6K3 756 aa29.08■■■□□ 2.25
Cln6-201ENSMUST00000034776 Msh6P54276 1358 aaKnown RBP29.07■■■□□ 2.24
Cln6-201ENSMUST00000034776 Gli3Q61602 1583 aa29.07■■■□□ 2.24
Cln6-201ENSMUST00000034776 Myt1Q8CFC2 1127 aa29.07■■■□□ 2.24
Cln6-201ENSMUST00000034776 Myo5bP21271 1818 aa29.07■■■□□ 2.24
Cln6-201ENSMUST00000034776 Ltbp4Q8K4G1 1666 aa29.06■■■□□ 2.24
Cln6-201ENSMUST00000034776 Amigo3Q8C2S7 508 aa29.05■■■□□ 2.24
Cln6-201ENSMUST00000034776 Aifm3Q3TY86 605 aa29.03■■■□□ 2.24
Cln6-201ENSMUST00000034776 Dixdc1Q80Y83 711 aa29.03■■■□□ 2.24
Cln6-201ENSMUST00000034776 Aldh1l2Q8K009 923 aa29.03■■■□□ 2.24
Cln6-201ENSMUST00000034776 Ppp1r37Q8BKR5 712 aa29.03■■■□□ 2.24
Cln6-201ENSMUST00000034776 Trim30dE9PWL0 497 aa29.02■■■□□ 2.24
Cln6-201ENSMUST00000034776 Ccdc183A2AJB1 534 aa29.02■■■□□ 2.24
Cln6-201ENSMUST00000034776 SkilQ60665 675 aa29.01■■■□□ 2.23
Cln6-201ENSMUST00000034776 4930567H17RikQ3V0K5 233 aa29■■■□□ 2.23
Cln6-201ENSMUST00000034776 Wwc1Q5SXA9 1104 aa29■■■□□ 2.23
Cln6-201ENSMUST00000034776 Ak7Q9D2H2 614 aa29■■■□□ 2.23
Cln6-201ENSMUST00000034776 Tmc1Q8R4P5 757 aa28.99■■■□□ 2.23
Cln6-201ENSMUST00000034776 Atf5O70191 283 aa28.99■■■□□ 2.23
Cln6-201ENSMUST00000034776 Ipo8Q7TMY7 1010 aa28.99■■■□□ 2.23
Cln6-201ENSMUST00000034776 Pip4k2bQ80XI4 416 aa28.99■■■□□ 2.23
Cln6-201ENSMUST00000034776 Phf23Q8BSN5 401 aa28.99■■■□□ 2.23
Cln6-201ENSMUST00000034776 Ddx17Q501J6 650 aaKnown RBP28.98■■■□□ 2.23
Cln6-201ENSMUST00000034776 Nol11Q8BJW5 723 aaKnown RBP28.98■■■□□ 2.23
Cln6-201ENSMUST00000034776 Sv2bQ8BG39 683 aa28.97■■■□□ 2.23
Cln6-201ENSMUST00000034776 Phlpp2Q8BXA7 1320 aa28.97■■■□□ 2.23
Cln6-201ENSMUST00000034776 Abcc12Q80WJ6 1366 aa28.96■■■□□ 2.23
Cln6-201ENSMUST00000034776 Pnmal2G3X9N3 661 aa28.96■■■□□ 2.23
Cln6-201ENSMUST00000034776 Q3TQI7 289 aaKnown RBP28.96■■■□□ 2.23
Cln6-201ENSMUST00000034776 Nkx1-2P42580 305 aa28.96■■■□□ 2.23
Cln6-201ENSMUST00000034776 Aplp1Q03157 653 aa28.96■■■□□ 2.23
Cln6-201ENSMUST00000034776 Col15a1O35206 1367 aa28.95■■■□□ 2.23
Cln6-201ENSMUST00000034776 Cyp2d12Q8BVD2 504 aa28.94■■■□□ 2.22
Cln6-201ENSMUST00000034776 Aox2Q5SGK3 1345 aa28.93■■■□□ 2.22
Cln6-201ENSMUST00000034776 Simc1E9Q6E9 1354 aa28.93■■■□□ 2.22
Cln6-201ENSMUST00000034776 Brd1E9PZ26 1189 aaKnown RBP28.92■■■□□ 2.22
Cln6-201ENSMUST00000034776 ChgaP26339 463 aaKnown RBP28.91■■■□□ 2.22
Cln6-201ENSMUST00000034776 Dlg5E9Q9R9 1921 aa28.9■■■□□ 2.22
Cln6-201ENSMUST00000034776 Map7O88735 730 aa28.9■■■□□ 2.22
Cln6-201ENSMUST00000034776 TkfcQ8VC30 578 aa28.9■■■□□ 2.22
Cln6-201ENSMUST00000034776 LifrP42703 1092 aa28.9■■■□□ 2.22
Cln6-201ENSMUST00000034776 Card10P58660 1021 aa28.9■■■□□ 2.22
Cln6-201ENSMUST00000034776 Tm6sf1P58749 370 aa28.9■■■□□ 2.22
Cln6-201ENSMUST00000034776 Chpf2Q3UU43 768 aa28.89■■■□□ 2.22
Cln6-201ENSMUST00000034776 Trim27Q62158 513 aa28.89■■■□□ 2.22
Cln6-201ENSMUST00000034776 DccP70211 1447 aa28.89■■■□□ 2.21
Cln6-201ENSMUST00000034776 Gm21698A0A087WQP8 267 aa28.88■■■□□ 2.21
Cln6-201ENSMUST00000034776 Gm21671G3UY31 267 aa28.88■■■□□ 2.21
Cln6-201ENSMUST00000034776 Fam83gQ5SWY7 812 aa28.88■■■□□ 2.21
Cln6-201ENSMUST00000034776 Kif18aQ91WD7 886 aa28.88■■■□□ 2.21
Cln6-201ENSMUST00000034776 OptnQ8K3K8 584 aa28.87■■■□□ 2.21
Cln6-201ENSMUST00000034776 Pnpla7A2AJ88 1352 aa28.87■■■□□ 2.21
Cln6-201ENSMUST00000034776 HnrnpuQ8VEK3 800 aaKnown RBP28.86■■■□□ 2.21
Cln6-201ENSMUST00000034776 Bcl9lQ67FY2 1494 aa28.86■■■□□ 2.21
Cln6-201ENSMUST00000034776 Eif4a1P60843 406 aaKnown RBP28.85■■■□□ 2.21
Cln6-201ENSMUST00000034776 Cetn4Q8K4K1 168 aa28.85■■■□□ 2.21
Cln6-201ENSMUST00000034776 CrklP47941 303 aa28.85■■■□□ 2.21
Cln6-201ENSMUST00000034776 Nkx2-3P97334 362 aa28.85■■■□□ 2.21
Cln6-201ENSMUST00000034776 Ppm1gQ61074 542 aa28.85■■■□□ 2.21
Cln6-201ENSMUST00000034776 Abca15E9PWH4 1668 aa28.84■■■□□ 2.21
Cln6-201ENSMUST00000034776 Gm10471E9Q1C7 252 aa28.84■■■□□ 2.21
Cln6-201ENSMUST00000034776 Cnksr1A2A9K7 700 aa28.83■■■□□ 2.21
Cln6-201ENSMUST00000034776 CarsQ9ER72 831 aaKnown RBP28.83■■■□□ 2.21
Cln6-201ENSMUST00000034776 Prkar2bP31324 416 aa28.82■■■□□ 2.2
Cln6-201ENSMUST00000034776 Triml2E9PW10 424 aa28.81■■■□□ 2.2
Cln6-201ENSMUST00000034776 Brinp3Q499E0 766 aa28.81■■■□□ 2.2
Cln6-201ENSMUST00000034776 CanxP35564 591 aaKnown RBP28.81■■■□□ 2.2
Cln6-201ENSMUST00000034776 Hsp90ab1P11499 724 aaKnown RBP28.79■■■□□ 2.2
Cln6-201ENSMUST00000034776 Fam13aQ8BGI4 693 aa28.79■■■□□ 2.2
Cln6-201ENSMUST00000034776 ThemisQ8BGW0 636 aa28.79■■■□□ 2.2
Cln6-201ENSMUST00000034776 FocadA2AKG8 1798 aa28.79■■■□□ 2.2
Cln6-201ENSMUST00000034776 Btbd11Q6GQW0 1109 aa28.79■■■□□ 2.2
Cln6-201ENSMUST00000034776 Aldh8a1Q8BH00 487 aa28.79■■■□□ 2.2
Cln6-201ENSMUST00000034776 Fgd1P52734 960 aa28.78■■■□□ 2.2
Cln6-201ENSMUST00000034776 Tbc1d32Q3URV1 1296 aa28.78■■■□□ 2.2
Cln6-201ENSMUST00000034776 Dnai1Q8C0M8 701 aa28.78■■■□□ 2.2
Cln6-201ENSMUST00000034776 Disp3A3KFU9 1347 aa28.78■■■□□ 2.2
Cln6-201ENSMUST00000034776 Col1a2Q01149 1372 aa28.78■■■□□ 2.2
Cln6-201ENSMUST00000034776 KnstrnQ9D9Z1 312 aaKnown RBP28.77■■■□□ 2.2
Cln6-201ENSMUST00000034776 Tnnt1O88346 262 aa28.76■■■□□ 2.2
Cln6-201ENSMUST00000034776 CoilQ5SU73 570 aa28.76■■■□□ 2.2
Cln6-201ENSMUST00000034776 Cog6Q8R3I3 657 aa28.76■■■□□ 2.2
Cln6-201ENSMUST00000034776 BcorQ8CGN4 1759 aa28.76■■■□□ 2.19
Cln6-201ENSMUST00000034776 Arhgef1Q61210 920 aaKnown RBP28.76■■■□□ 2.19
Cln6-201ENSMUST00000034776 Eif4g2Q62448 906 aaKnown RBP28.76■■■□□ 2.19
Cln6-201ENSMUST00000034776 Pdzd9Q9D9M4 266 aa28.75■■■□□ 2.19
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms