RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Col15a1O35206 1367 aa21.6■■□□□ 1.05
Rpf1-201ENSMUST00000029838 1700019A02RikA0A087WPV9 146 aa21.59■■□□□ 1.05
Rpf1-201ENSMUST00000029838 Foxp4Q9DBY0 795 aaKnown RBP21.59■■□□□ 1.05
Rpf1-201ENSMUST00000029838 Nup153E9Q3G8 1462 aaKnown RBP21.58■■□□□ 1.05
Rpf1-201ENSMUST00000029838 Nsd3Q6P2L6 1439 aa21.58■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Q3UPC7 1272 aa21.57■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Gimap5Q8BWF2 308 aa21.57■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Slc4a3P16283 1227 aa21.56■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Prim1P20664 417 aa21.56■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Q3TQI7 289 aaKnown RBP21.56■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Senp3Q9EP97 568 aaKnown RBP21.56■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Nectin2P32507 530 aa21.55■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Rangap1P46061 589 aaKnown RBP21.55■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Chl1P70232 1209 aa21.55■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Zranb3Q6NZP1 1069 aa21.55■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Maco1Q7TQE6 664 aaKnown RBP21.55■■□□□ 1.04
Rpf1-201ENSMUST00000029838 ThemisQ8BGW0 636 aa21.55■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Ttll13A4Q9F6 804 aa21.54■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Snap23O09044 210 aa21.54■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Slit1Q80TR4 1531 aa21.54■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Duxf3A0A0N4SV92 674 aa21.53■■□□□ 1.04
Rpf1-201ENSMUST00000029838 MarsQ68FL6 902 aaKnown RBP21.53■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Myo5bP21271 1818 aa21.53■■□□□ 1.04
Rpf1-201ENSMUST00000029838 4930572O03RikQ8C5Y0 211 aa21.53■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Znf330Q922H9 316 aa21.53■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Aox2Q5SGK3 1345 aa21.52■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Pibf1E9Q6K3 756 aa21.52■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Zpr1Q62384 459 aa21.52■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Ric3Q8BPM6 367 aa21.52■■□□□ 1.04
Rpf1-201ENSMUST00000029838 Cdhr2E9Q7P9 1308 aa21.51■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Adgrb1Q3UHD1 1582 aa21.51■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Smc5Q8CG46 1101 aaKnown RBP21.51■■□□□ 1.03
Rpf1-201ENSMUST00000029838 MvpQ9EQK5 861 aa21.51■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Slx1bQ8BX32 270 aa21.5■■□□□ 1.03
Rpf1-201ENSMUST00000029838 EspnQ9ET47 871 aa21.5■■□□□ 1.03
Rpf1-201ENSMUST00000029838 RgmbQ7TQ33 436 aa21.5■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Txnrd1Q9JMH6 613 aa21.5■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Marf1Q8BJ34 1730 aaKnown RBP21.49■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Pak3Q61036 559 aa21.49■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Sv2bQ8BG39 683 aa21.49■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Hs1bp3Q3TC93 395 aa21.48■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Cc2d1aQ8K1A6 943 aa21.48■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Chmp7Q8R1T1 451 aa21.48■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Chmp5Q9D7S9 219 aa21.48■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Ankrd44B2RXR6 993 aa21.47■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Atf5O70191 283 aa21.47■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Ppp1r3fQ9JIG4 799 aa21.47■■□□□ 1.03
Rpf1-201ENSMUST00000029838 FocadA2AKG8 1798 aa21.47■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Btbd11Q6GQW0 1109 aa21.47■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Atl3Q91YH5 541 aa21.47■■□□□ 1.03
Rpf1-201ENSMUST00000029838 Acsbg1Q99PU5 721 aa21.45■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Nutm1Q8BHP2 1126 aa21.44■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Pdzd9Q9D9M4 266 aa21.44■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Phkg2Q9DB30 406 aa21.44■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Rtl5Q5DTT4 599 aa21.44■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Eif3bQ8JZQ9 803 aaKnown RBP21.44■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Zeb2Q9R0G7 1215 aa21.44■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Msh6P54276 1358 aaKnown RBP21.43■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Aldh1l2Q8K009 923 aa21.43■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Eif4a1P60843 406 aaKnown RBP21.42■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Chpf2Q3UU43 768 aa21.42■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Bcl11bQ99PV8 884 aa21.42■■□□□ 1.02
Rpf1-201ENSMUST00000029838 PsapQ61207 557 aaKnown RBP21.4■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Ybx3Q9JKB3 361 aaKnown RBP21.4■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Tnks1bp1P58871 1720 aa21.4■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Cnksr1A2A9K7 700 aa21.4■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Fam50bQ9WTJ8 334 aa21.4■■□□□ 1.02
Rpf1-201ENSMUST00000029838 Tom1O88746 492 aa21.39■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Ssfa2Q922B9 1252 aa21.39■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Lrrc59Q922Q8 307 aaKnown RBP21.39■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Rlbp1Q9Z275 317 aa21.39■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Pard3Q99NH2 1333 aa21.39■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Tns2Q8CGB6 1400 aa21.39■■□□□ 1.01
Rpf1-201ENSMUST00000029838 HnrnpuQ8VEK3 800 aaKnown RBP21.38■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Col1a2Q01149 1372 aa21.38■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Zfp142G5E869 1843 aa21.38■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Tnnt1O88346 262 aa21.37■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Fgd1P52734 960 aa21.37■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Arhgef1Q61210 920 aaKnown RBP21.37■■□□□ 1.01
Rpf1-201ENSMUST00000029838 B4galnt3Q6L8S8 986 aa21.37■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Liat1Q810M6 228 aa21.36■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Dbr1Q923B1 550 aa21.36■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Cyp2d12Q8BVD2 504 aa21.35■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Speer4bQ9D9F7 267 aa21.35■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Ddx54Q8K4L0 874 aaKnown RBP21.34■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Irx6Q9ER75 438 aa21.34■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Dlg5E9Q9R9 1921 aa21.34■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Wwc1Q5SXA9 1104 aa21.34■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Taf7Q9R1C0 341 aa21.34■■□□□ 1.01
Rpf1-201ENSMUST00000029838 Qtrt2B8ZXI1 415 aa21.33■■□□□ 1
Rpf1-201ENSMUST00000029838 Aifm3Q3TY86 605 aa21.33■■□□□ 1
Rpf1-201ENSMUST00000029838 Fam83gQ5SWY7 812 aa21.33■■□□□ 1
Rpf1-201ENSMUST00000029838 Tmem119Q8R138 280 aa21.33■■□□□ 1
Rpf1-201ENSMUST00000029838 Asic4Q7TNS7 539 aa21.32■■□□□ 1
Rpf1-201ENSMUST00000029838 Ccdc155Q80VJ8 648 aa21.32■■□□□ 1
Rpf1-201ENSMUST00000029838 Smim5Q8BT42 78 aa21.32■■□□□ 1
Rpf1-201ENSMUST00000029838 Cluap1Q8R3P7 413 aa21.32■■□□□ 1
Rpf1-201ENSMUST00000029838 Armcx1Q9CX83 456 aa21.32■■□□□ 1
Rpf1-201ENSMUST00000029838 Gm21663A0A0G2JE01 267 aa21.31■■□□□ 1
Rpf1-201ENSMUST00000029838 Gm7361D3Z6R1 267 aa21.31■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms