RNA–Protein interactions for RNA: ENSMUST00000005630.10

Msh4-201, Transcript of MutS protein homolog 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh4, Length 3,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-201ENSMUST00000005630 Myo5bP21271 1818 aa15.98■□□□□ 0.15
Msh4-201ENSMUST00000005630 Ggnbp2Q5SV77 696 aa15.98■□□□□ 0.15
Msh4-201ENSMUST00000005630 TmpoQ61033 693 aaKnown RBP15.98■□□□□ 0.15
Msh4-201ENSMUST00000005630 Fam13aQ8BGI4 693 aa15.98■□□□□ 0.15
Msh4-201ENSMUST00000005630 EngaseQ8BX80 734 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Triml2E9PW10 424 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Spryd3E9Q9B3 442 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Rfx1P48377 963 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Idi1P58044 227 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Ssh1Q76I79 1042 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Rab11fip3Q8CHD8 1047 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 Plcd4Q8K3R3 807 aa15.97■□□□□ 0.15
Msh4-201ENSMUST00000005630 NgefQ8CHT1 710 aa15.96■□□□□ 0.15
Msh4-201ENSMUST00000005630 1700019A02RikA0A087WPV9 146 aa15.96■□□□□ 0.15
Msh4-201ENSMUST00000005630 Pibf1E9Q6K3 756 aa15.96■□□□□ 0.15
Msh4-201ENSMUST00000005630 Chmp4bQ9D8B3 224 aaKnown RBP15.96■□□□□ 0.15
Msh4-201ENSMUST00000005630 Arfgef2A2A5R2 1792 aa15.96■□□□□ 0.14
Msh4-201ENSMUST00000005630 GorabQ8BRM2 368 aa15.96■□□□□ 0.14
Msh4-201ENSMUST00000005630 Smarca5Q91ZW3 1051 aaKnown RBP15.96■□□□□ 0.14
Msh4-201ENSMUST00000005630 CenppQ9CZ92 286 aa15.96■□□□□ 0.14
Msh4-201ENSMUST00000005630 Ccdc146E9Q9F7 977 aa15.95■□□□□ 0.14
Msh4-201ENSMUST00000005630 Nlgn1Q99K10 843 aa15.94■□□□□ 0.14
Msh4-201ENSMUST00000005630 Mcm4P49717 862 aa15.94■□□□□ 0.14
Msh4-201ENSMUST00000005630 Eya1P97767 591 aa15.94■□□□□ 0.14
Msh4-201ENSMUST00000005630 Prkar2bP31324 416 aa15.94■□□□□ 0.14
Msh4-201ENSMUST00000005630 Kdm4cQ8VCD7 1054 aa15.94■□□□□ 0.14
Msh4-201ENSMUST00000005630 Rims2Q9EQZ7 1530 aa15.93■□□□□ 0.14
Msh4-201ENSMUST00000005630 Ppp6r3Q922D4 844 aa15.93■□□□□ 0.14
Msh4-201ENSMUST00000005630 Eif4g2Q62448 906 aaKnown RBP15.93■□□□□ 0.14
Msh4-201ENSMUST00000005630 Atg4a-psA0A0G2JFS9 396 aa15.92■□□□□ 0.14
Msh4-201ENSMUST00000005630 Atg4aQ8C9S8 396 aa15.92■□□□□ 0.14
Msh4-201ENSMUST00000005630 Gcc1Q9D4H2 778 aa15.91■□□□□ 0.14
Msh4-201ENSMUST00000005630 Dlg5E9Q9R9 1921 aa15.91■□□□□ 0.14
Msh4-201ENSMUST00000005630 Sox12Q04890 314 aa15.91■□□□□ 0.14
Msh4-201ENSMUST00000005630 Cgnl1Q6AW69 1298 aa15.91■□□□□ 0.14
Msh4-201ENSMUST00000005630 Anapc15-psA0A140T8L6 141 aa15.9■□□□□ 0.14
Msh4-201ENSMUST00000005630 Pdia3P27773 505 aaKnown RBP15.9■□□□□ 0.14
Msh4-201ENSMUST00000005630 Dennd6aQ8BH65 605 aa15.9■□□□□ 0.14
Msh4-201ENSMUST00000005630 Robo1O89026 1612 aa15.89■□□□□ 0.13
Msh4-201ENSMUST00000005630 Fam83gQ5SWY7 812 aa15.89■□□□□ 0.13
Msh4-201ENSMUST00000005630 Nucb1Q02819 459 aaKnown RBP15.89■□□□□ 0.13
Msh4-201ENSMUST00000005630 HnrnpuQ8VEK3 800 aaKnown RBP15.89■□□□□ 0.13
Msh4-201ENSMUST00000005630 Il4rP16382 810 aa15.88■□□□□ 0.13
Msh4-201ENSMUST00000005630 Ccne1Q61457 408 aa15.88■□□□□ 0.13
Msh4-201ENSMUST00000005630 Igsf1Q7TQA1 1317 aa15.88■□□□□ 0.13
Msh4-201ENSMUST00000005630 Frmpd2A0A140LI67 1392 aa15.88■□□□□ 0.13
Msh4-201ENSMUST00000005630 C3P01027 1663 aa15.88■□□□□ 0.13
Msh4-201ENSMUST00000005630 Cyp2d12Q8BVD2 504 aa15.87■□□□□ 0.13
Msh4-201ENSMUST00000005630 Ppip5k2Q6ZQB6 1129 aa15.87■□□□□ 0.13
Msh4-201ENSMUST00000005630 Pnpla7A2AJ88 1352 aa15.87■□□□□ 0.13
Msh4-201ENSMUST00000005630 Slc35g1Q8BY79 368 aa15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Foxp4Q9DBY0 795 aaKnown RBP15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Stk11ipQ3TAA7 1072 aa15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Gm10563F6WIE4 79 aa15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Hoxc9P09633 260 aa15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Rsph3aQ3UFY4 516 aa15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Sv2bQ8BG39 683 aa15.86■□□□□ 0.13
Msh4-201ENSMUST00000005630 Sipa1l2Q80TE4 1722 aa15.85■□□□□ 0.13
Msh4-201ENSMUST00000005630 CalcaP70160 136 aa15.85■□□□□ 0.13
Msh4-201ENSMUST00000005630 Mcm2P97310 904 aa15.85■□□□□ 0.13
Msh4-201ENSMUST00000005630 Cabp4Q8VHC5 271 aa15.85■□□□□ 0.13
Msh4-201ENSMUST00000005630 Gm21190A0A0G2JGJ6 266 aa15.84■□□□□ 0.13
Msh4-201ENSMUST00000005630 Cc2d1aQ8K1A6 943 aa15.83■□□□□ 0.13
Msh4-201ENSMUST00000005630 Cyp2d11P24457 504 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 Tmem132eQ6IEE6 982 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 Bloc1s4Q8VED2 215 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 Alpk3Q924C5 1678 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 Plppr3Q7TPB0 716 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 1700010I14RikQ7TPG0 532 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 Bcar3Q9QZK2 820 aa15.83■□□□□ 0.12
Msh4-201ENSMUST00000005630 Rtf1A2AQ19 715 aaKnown RBP15.82■□□□□ 0.12
Msh4-201ENSMUST00000005630 Prune1Q8BIW1 454 aa15.82■□□□□ 0.12
Msh4-201ENSMUST00000005630 Nfat5Q9WV30 1534 aa15.82■□□□□ 0.12
Msh4-201ENSMUST00000005630 Plcb2A3KGF7 1181 aa15.82■□□□□ 0.12
Msh4-201ENSMUST00000005630 Cyp46a1Q9WVK8 500 aa15.81■□□□□ 0.12
Msh4-201ENSMUST00000005630 Fgd1P52734 960 aa15.81■□□□□ 0.12
Msh4-201ENSMUST00000005630 Dnttip2Q8R2M2 758 aaKnown RBP15.81■□□□□ 0.12
Msh4-201ENSMUST00000005630 Nup153E9Q3G8 1462 aaKnown RBP15.81■□□□□ 0.12
Msh4-201ENSMUST00000005630 Elp1Q7TT37 1333 aaKnown RBP15.81■□□□□ 0.12
Msh4-201ENSMUST00000005630 Disp3A3KFU9 1347 aa15.8■□□□□ 0.12
Msh4-201ENSMUST00000005630 Rnf123Q5XPI3 1314 aa15.8■□□□□ 0.12
Msh4-201ENSMUST00000005630 Atf5O70191 283 aa15.8■□□□□ 0.12
Msh4-201ENSMUST00000005630 Tmem94Q7TSH8 1360 aa15.8■□□□□ 0.12
Msh4-201ENSMUST00000005630 Lmtk3Q5XJV6 1424 aa15.8■□□□□ 0.12
Msh4-201ENSMUST00000005630 Safb2Q80YR5 991 aaKnown RBP15.79■□□□□ 0.12
Msh4-201ENSMUST00000005630 Cyp27a1Q9DBG1 533 aa15.79■□□□□ 0.12
Msh4-201ENSMUST00000005630 Kcnn1Q9EQR3 537 aa15.79■□□□□ 0.12
Msh4-201ENSMUST00000005630 Srgap3Q812A2 1099 aa15.79■□□□□ 0.12
Msh4-201ENSMUST00000005630 Ppp1r42Q8R1Z4 357 aa15.79■□□□□ 0.12
Msh4-201ENSMUST00000005630 BcorQ8CGN4 1759 aa15.79■□□□□ 0.12
Msh4-201ENSMUST00000005630 Thsd7aQ69ZU6 1645 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Mmp8O70138 465 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Nkx2-3P97334 362 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Ipo4Q8VI75 1082 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 RestQ8VIG1 1082 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Ap3b2Q9JME5 1082 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Chpf2Q3UU43 768 aa15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Gnai2P08752 355 aaKnown RBP15.78■□□□□ 0.12
Msh4-201ENSMUST00000005630 Q9D2X8 372 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms