RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W MTF2P10849 440 aa6.57□□□□□ -1.36
VPS5YOR069W HCA4P20448 770 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W RCR1P38212 213 aa6.57□□□□□ -1.36
VPS5YOR069W LCB5Q06147 687 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W RRP6Q12149 733 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W RMP1Q12530 201 aa6.57□□□□□ -1.36
VPS5YOR069W AI2P03876 854 aa6.56□□□□□ -1.36
VPS5YOR069W CDC37P06101 506 aaKnown RBP6.56□□□□□ -1.36
VPS5YOR069W PFK2P16862 959 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
VPS5YOR069W ALD2P47771 506 aa6.56□□□□□ -1.36
VPS5YOR069W MAK10Q02197 733 aa6.56□□□□□ -1.36
VPS5YOR069W MEC3Q02574 474 aa6.56□□□□□ -1.36
VPS5YOR069W SPO19Q03029 223 aa6.56□□□□□ -1.36
VPS5YOR069W DCS2Q12123 353 aa6.56□□□□□ -1.36
VPS5YOR069W FKS3Q04952 1785 aa6.56□□□□□ -1.36
VPS5YOR069W CDC8P00572 216 aa6.55□□□□□ -1.36
VPS5YOR069W KRS1P15180 591 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W URA1P28272 314 aaPredicted RBP6.55□□□□□ -1.36
VPS5YOR069W PAP1P29468 568 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W PDB1P32473 366 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W SRB4P32569 687 aa6.55□□□□□ -1.36
VPS5YOR069W YME2P32843 850 aa6.55□□□□□ -1.36
VPS5YOR069W CTM1P38818 585 aa6.55□□□□□ -1.36
VPS5YOR069W SET1P38827 1080 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W SHQ1P40486 507 aaPredicted RBP6.55□□□□□ -1.36
VPS5YOR069W CUE3P53137 624 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W CMS1Q07897 291 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W DIP2Q12220 943 aaPredicted RBP6.55□□□□□ -1.36
VPS5YOR069W GYP5Q12344 894 aa6.55□□□□□ -1.36
VPS5YOR069W TY4A-HQ6Q5P6 413 aa6.55□□□□□ -1.36
VPS5YOR069W GAL11P19659 1081 aa6.55□□□□□ -1.36
VPS5YOR069W CBP3P21560 335 aa6.55□□□□□ -1.36
VPS5YOR069W MRPS28P21771 286 aa6.55□□□□□ -1.36
VPS5YOR069W ARG1P22768 420 aa6.55□□□□□ -1.36
VPS5YOR069W YKR018CP36114 725 aa6.55□□□□□ -1.36
VPS5YOR069W RPN10P38886 268 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W MRX1P40050 688 aa6.55□□□□□ -1.36
VPS5YOR069W ILM1P47155 203 aa6.55□□□□□ -1.36
VPS5YOR069W ALD3P54114 506 aa6.55□□□□□ -1.36
VPS5YOR069W INP54Q08227 384 aaKnown RBP6.55□□□□□ -1.36
VPS5YOR069W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
VPS5YOR069W SPO12P17123 173 aa6.54□□□□□ -1.36
VPS5YOR069W DPH5P32469 300 aaPredicted RBP6.54□□□□□ -1.36
VPS5YOR069W TPS3P38426 1054 aaKnown RBP6.54□□□□□ -1.36
VPS5YOR069W NGL3Q03210 505 aa6.54□□□□□ -1.36
VPS5YOR069W UTP5Q04177 643 aaKnown RBP6.54□□□□□ -1.36
VPS5YOR069W YLR287CQ05881 355 aa6.54□□□□□ -1.36
VPS5YOR069W MPH3P0CE00 602 aa6.54□□□□□ -1.36
VPS5YOR069W RAD57P25301 460 aa6.54□□□□□ -1.36
VPS5YOR069W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
VPS5YOR069W OLA1P38219 394 aaKnown RBP6.54□□□□□ -1.36
VPS5YOR069W PXA1P41909 870 aa6.54□□□□□ -1.36
VPS5YOR069W YGR237CP50089 785 aa6.54□□□□□ -1.36
VPS5YOR069W SLM3Q12093 417 aa6.54□□□□□ -1.36
VPS5YOR069W LAM4P38800 1345 aa6.53□□□□□ -1.36
VPS5YOR069W SPO11P23179 398 aa6.53□□□□□ -1.36
VPS5YOR069W YMR147WP40218 223 aaKnown RBP6.53□□□□□ -1.36
VPS5YOR069W HOS4P40480 1083 aa6.53□□□□□ -1.36
VPS5YOR069W PXR1P53335 271 aaPredicted RBP6.53□□□□□ -1.36
VPS5YOR069W FAR11P53917 953 aa6.53□□□□□ -1.36
VPS5YOR069W NCS2P53923 493 aaPredicted RBP6.53□□□□□ -1.36
VPS5YOR069W YLR001CQ07895 862 aa6.53□□□□□ -1.36
VPS5YOR069W PLP2Q12017 286 aa6.53□□□□□ -1.36
VPS5YOR069W CDC6P09119 513 aa6.52□□□□□ -1.37
VPS5YOR069W SEC18P18759 758 aaKnown RBP6.52□□□□□ -1.37
VPS5YOR069W CKI1P20485 582 aa6.52□□□□□ -1.37
VPS5YOR069W BMH1P29311 267 aaKnown RBP6.52□□□□□ -1.37
VPS5YOR069W PUP2P32379 260 aa6.52□□□□□ -1.37
VPS5YOR069W APL2P36000 726 aaPredicted RBP6.52□□□□□ -1.37
VPS5YOR069W YMR124WP39523 943 aaKnown RBP6.52□□□□□ -1.37
VPS5YOR069W PKH3Q03306 898 aaPredicted RBP6.52□□□□□ -1.37
VPS5YOR069W EBS1Q03466 884 aaKnown RBP6.52□□□□□ -1.37
VPS5YOR069W EST2Q06163 884 aa6.52□□□□□ -1.37
VPS5YOR069W SSF2Q12153 453 aaPredicted RBP6.52□□□□□ -1.37
VPS5YOR069W RAD5P32849 1169 aaPredicted RBP6.52□□□□□ -1.37
VPS5YOR069W SEC8P32855 1065 aa6.52□□□□□ -1.37
VPS5YOR069W MIP6P38760 659 aaKnown RBP6.52□□□□□ -1.37
VPS5YOR069W AKR1P39010 764 aa6.52□□□□□ -1.37
VPS5YOR069W YNL193WP53870 558 aa6.52□□□□□ -1.37
VPS5YOR069W ADA2Q02336 434 aa6.52□□□□□ -1.37
VPS5YOR069W UME1Q03010 460 aa6.52□□□□□ -1.37
VPS5YOR069W CSC1Q06538 782 aa6.52□□□□□ -1.37
VPS5YOR069W GET3Q12154 354 aaKnown RBP6.52□□□□□ -1.37
VPS5YOR069W SAC3P46674 1301 aa6.51□□□□□ -1.37
VPS5YOR069W VPS1P21576 704 aaKnown RBP6.51□□□□□ -1.37
VPS5YOR069W CDC10P25342 322 aaKnown RBP6.51□□□□□ -1.37
VPS5YOR069W RPG1P38249 964 aaKnown RBP6.51□□□□□ -1.37
VPS5YOR069W XKS1P42826 600 aa6.51□□□□□ -1.37
VPS5YOR069W SEC5P89102 971 aa6.51□□□□□ -1.37
VPS5YOR069W PKH1Q03407 766 aa6.51□□□□□ -1.37
VPS5YOR069W NEW1Q08972 1196 aaKnown RBP6.51□□□□□ -1.37
VPS5YOR069W SUP35P05453 685 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W PRP5P21372 849 aaPredicted RBP6.5□□□□□ -1.37
VPS5YOR069W LAS1P36146 502 aaPredicted RBP6.5□□□□□ -1.37
VPS5YOR069W MET1P36150 593 aa6.5□□□□□ -1.37
VPS5YOR069W CRG1P38892 291 aaRIP-Chip data6.5□□□□□ -1.37not detected
VPS5YOR069W TIF4632P39936 914 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W YAP5P40574 245 aa6.5□□□□□ -1.37
VPS5YOR069W MAD1P40957 749 aa6.5□□□□□ -1.37
VPS5YOR069W HUL5P53119 910 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms