RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W CTH1P47976 325 aa3.1□□□□□ -1.91
CFT2YLR115W FAR11P53917 953 aa3.1□□□□□ -1.91
CFT2YLR115W TOS4Q06266 489 aa3.1□□□□□ -1.91
CFT2YLR115W NOC3Q07896 663 aaPredicted RBP3.1□□□□□ -1.91
CFT2YLR115W ECM2P38241 364 aaKnown RBP3.09□□□□□ -1.91
CFT2YLR115W PPX1P38698 397 aa3.09□□□□□ -1.91
CFT2YLR115W YGR130CP53278 816 aa3.09□□□□□ -1.91
CFT2YLR115W MSC6Q08818 692 aaKnown RBP3.09□□□□□ -1.91
CFT2YLR115W OMA1P36163 345 aa3.09□□□□□ -1.91
CFT2YLR115W SEA4P38164 1038 aa3.09□□□□□ -1.91
CFT2YLR115W SAM37P50110 327 aa3.09□□□□□ -1.91
CFT2YLR115W MON1P53129 644 aa3.09□□□□□ -1.91
CFT2YLR115W PMT7Q06644 662 aa3.09□□□□□ -1.91
CFT2YLR115W MED7Q08278 222 aa3.09□□□□□ -1.91
CFT2YLR115W YOR223WQ12015 292 aa3.09□□□□□ -1.91
CFT2YLR115W MCM5P29496 775 aaKnown RBP3.08□□□□□ -1.92
CFT2YLR115W UGA4P32837 571 aa3.08□□□□□ -1.92
CFT2YLR115W EXO5P38289 585 aa3.08□□□□□ -1.92
CFT2YLR115W RVS167P39743 482 aaKnown RBP3.08□□□□□ -1.92
CFT2YLR115W DAK2P43550 591 aa3.08□□□□□ -1.92
CFT2YLR115W SPO74P45819 413 aa3.08□□□□□ -1.92
CFT2YLR115W MEC3Q02574 474 aa3.08□□□□□ -1.92
CFT2YLR115W SEN54Q02825 467 aaPredicted RBP3.08□□□□□ -1.92
CFT2YLR115W SWR1Q05471 1514 aa3.08□□□□□ -1.92
CFT2YLR115W GPT2P36148 743 aa3.08□□□□□ -1.92
CFT2YLR115W UTP22P53254 1237 aaPredicted RBP3.08□□□□□ -1.92
CFT2YLR115W NOG1Q02892 647 aaKnown RBP3.08□□□□□ -1.92
CFT2YLR115W YCS4Q06156 1176 aa3.08□□□□□ -1.92
CFT2YLR115W GIC2Q06648 383 aa3.08□□□□□ -1.92
CFT2YLR115W MAC1P35192 417 aa3.07□□□□□ -1.92
CFT2YLR115W MAG2Q06436 670 aaKnown RBP3.07□□□□□ -1.92
CFT2YLR115W CYC7P00045 113 aa3.07□□□□□ -1.92
CFT2YLR115W PUB1P32588 453 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
CFT2YLR115W TOS1P38288 455 aa3.07□□□□□ -1.92
CFT2YLR115W STM1P39015 273 aaKnown RBP3.07□□□□□ -1.92
CFT2YLR115W DOT1Q04089 582 aaKnown RBP3.07□□□□□ -1.92
CFT2YLR115W YMR074CQ04773 145 aa3.07□□□□□ -1.92
CFT2YLR115W IPL1P38991 367 aa3.06□□□□□ -1.92
CFT2YLR115W ALG6Q12001 544 aaKnown RBP3.06□□□□□ -1.92
CFT2YLR115W GCD1P09032 578 aaPredicted RBP3.06□□□□□ -1.92
CFT2YLR115W MSB1P21339 1137 aaKnown RBP3.06□□□□□ -1.92
CFT2YLR115W VPS35P34110 944 aa3.06□□□□□ -1.92
CFT2YLR115W REI1P38344 393 aaPredicted RBP3.06□□□□□ -1.92
CFT2YLR115W CIC1P38779 376 aaKnown RBP3.06□□□□□ -1.92
CFT2YLR115W MSH4P40965 878 aaPredicted RBP3.06□□□□□ -1.92
CFT2YLR115W BRE4Q07660 1125 aa3.06□□□□□ -1.92
CFT2YLR115W HEM13P11353 328 aaKnown RBP3.06□□□□□ -1.92
CFT2YLR115W PRP40P33203 583 aaKnown RBP3.06□□□□□ -1.92
CFT2YLR115W ARL1P38116 183 aaKnown RBP3.06□□□□□ -1.92
CFT2YLR115W NEM1P38757 446 aa3.06□□□□□ -1.92
CFT2YLR115W SLS1P42900 643 aa3.06□□□□□ -1.92
CFT2YLR115W ALT1P52893 592 aa3.06□□□□□ -1.92
CFT2YLR115W EAR1Q03212 550 aa3.06□□□□□ -1.92
CFT2YLR115W YLL054CQ12244 843 aa3.06□□□□□ -1.92
CFT2YLR115W GCD6P32501 712 aaKnown RBP3.05□□□□□ -1.92
CFT2YLR115W MMM1P41800 426 aa3.05□□□□□ -1.92
CFT2YLR115W YGR045CP53229 120 aa3.05□□□□□ -1.92
CFT2YLR115W OYE3P41816 400 aaPredicted RBP3.05□□□□□ -1.92
CFT2YLR115W ULP1Q02724 621 aa3.05□□□□□ -1.92
CFT2YLR115W MSH3P25336 1018 aa3.04□□□□□ -1.92
CFT2YLR115W WHI3P34761 661 aaKnown RBP3.04□□□□□ -1.92
CFT2YLR115W RDH54P38086 958 aa3.04□□□□□ -1.92
CFT2YLR115W FAA3P39002 694 aa3.04□□□□□ -1.92
CFT2YLR115W SDH1Q00711 640 aa3.04□□□□□ -1.92
CFT2YLR115W DAL4Q04895 635 aa3.04□□□□□ -1.92
CFT2YLR115W RPS4AP0CX35 261 aaKnown RBP3.04□□□□□ -1.92
CFT2YLR115W RPS4BP0CX36 261 aaKnown RBP3.04□□□□□ -1.92
CFT2YLR115W CIT3P43635 486 aa3.04□□□□□ -1.92
CFT2YLR115W HXK1P04806 485 aaKnown RBP3.03□□□□□ -1.92
CFT2YLR115W ELA1P53861 379 aaPredicted RBP3.03□□□□□ -1.92
CFT2YLR115W UTP5Q04177 643 aaKnown RBP3.03□□□□□ -1.92
CFT2YLR115W SEC20P28791 383 aa3.03□□□□□ -1.93
CFT2YLR115W LIP5P32875 414 aa3.03□□□□□ -1.93
CFT2YLR115W RPT1P33299 467 aaKnown RBP3.03□□□□□ -1.93
CFT2YLR115W YKL077WP36081 392 aa3.03□□□□□ -1.93
CFT2YLR115W YPL109CQ02981 657 aa3.03□□□□□ -1.93
CFT2YLR115W SMY2P32909 740 aaKnown RBP3.02□□□□□ -1.93
CFT2YLR115W YVC1Q12324 675 aa3.02□□□□□ -1.93
CFT2YLR115W VMA4P22203 233 aaKnown RBP3.02□□□□□ -1.93
CFT2YLR115W PEX7P39108 375 aa3.02□□□□□ -1.93
CFT2YLR115W PIC2P40035 300 aa3.02□□□□□ -1.93
CFT2YLR115W THI12P42883 340 aa3.02□□□□□ -1.93
CFT2YLR115W THI5P43534 340 aa3.02□□□□□ -1.93
CFT2YLR115W THI11P47183 340 aa3.02□□□□□ -1.93
CFT2YLR115W RCM1P53972 490 aa3.02□□□□□ -1.93
CFT2YLR115W PEX13P80667 386 aa3.02□□□□□ -1.93
CFT2YLR115W ADI1Q03677 179 aa3.02□□□□□ -1.93
CFT2YLR115W THI13Q07748 340 aa3.02□□□□□ -1.93
CFT2YLR115W NOP8Q08287 484 aaPredicted RBP3.02□□□□□ -1.93
CFT2YLR115W YOR059CQ08448 450 aaKnown RBP3.02□□□□□ -1.93
CFT2YLR115W LRG1P35688 1017 aa3.01□□□□□ -1.93
CFT2YLR115W SHU2P38957 223 aa3.01□□□□□ -1.93
CFT2YLR115W YGL140CP53120 1219 aa3.01□□□□□ -1.93
CFT2YLR115W ATE1P16639 503 aa3.01□□□□□ -1.93
CFT2YLR115W NFS1P25374 497 aa3.01□□□□□ -1.93
CFT2YLR115W NNK1P36003 928 aa3.01□□□□□ -1.93
CFT2YLR115W PEX28P38848 579 aa3.01□□□□□ -1.93
CFT2YLR115W RRP15Q06511 250 aaPredicted RBP3.01□□□□□ -1.93
CFT2YLR115W KAR2P16474 682 aaKnown RBP3□□□□□ -1.93
CFT2YLR115W AVT1P47082 602 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms