RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeast

Gene VPS51, Length 495 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS51	YKR020W	CHS2	P14180	963 aa		4.93	□□□□□ -1.62
VPS51	YKR020W	GCD6	P32501	712 aa	Known RBP	4.93	□□□□□ -1.62
VPS51	YKR020W	NUT1	P53114	1132 aa		4.93	□□□□□ -1.62
VPS51	YKR020W	FAR11	P53917	953 aa		4.93	□□□□□ -1.62
VPS51	YKR020W	SEN54	Q02825	467 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS51	YKR020W	PMT7	Q06644	662 aa		4.93	□□□□□ -1.62
VPS51	YKR020W	HTS1	P07263	546 aa	Known RBP	4.92	□□□□□ -1.62
VPS51	YKR020W	MET4	P32389	672 aa		4.92	□□□□□ -1.62
VPS51	YKR020W	SLD2	P34252	453 aa		4.92	□□□□□ -1.62
VPS51	YKR020W	REC8	Q12188	680 aa		4.92	□□□□□ -1.62
VPS51	YKR020W	NAM7	P30771	971 aa	Known RBP	4.91	□□□□□ -1.62
VPS51	YKR020W	YAF9	P53930	226 aa		4.91	□□□□□ -1.62
VPS51	YKR020W	MAG2	Q06436	670 aa	Known RBP	4.91	□□□□□ -1.62
VPS51	YKR020W	YIG1	Q08956	461 aa		4.91	□□□□□ -1.62
VPS51	YKR020W	CYC7	P00045	113 aa		4.9	□□□□□ -1.63
VPS51	YKR020W	PHO4	P07270	312 aa	Known RBP	4.9	□□□□□ -1.63
VPS51	YKR020W	RPT1	P33299	467 aa	Known RBP	4.9	□□□□□ -1.63
VPS51	YKR020W	UBP5	P39944	805 aa		4.9	□□□□□ -1.63
VPS51	YKR020W	DAK2	P43550	591 aa		4.9	□□□□□ -1.63
VPS51	YKR020W	YCS4	Q06156	1176 aa		4.9	□□□□□ -1.63
VPS51	YKR020W	OXR1	Q08952	273 aa		4.9	□□□□□ -1.63
VPS51	YKR020W	YOR223W	Q12015	292 aa		4.9	□□□□□ -1.63
VPS51	YKR020W	RNQ1	P25367	405 aa		4.89	□□□□□ -1.63
VPS51	YKR020W	UGA4	P32837	571 aa		4.89	□□□□□ -1.63
VPS51	YKR020W	RVS167	P39743	482 aa	Known RBP	4.89	□□□□□ -1.63
VPS51	YKR020W	RSM26	P47141	266 aa		4.89	□□□□□ -1.63
VPS51	YKR020W	UTP22	P53254	1237 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS51	YKR020W	NCE103	P53615	221 aa		4.89	□□□□□ -1.63
VPS51	YKR020W	DAL4	Q04895	635 aa		4.89	□□□□□ -1.63
VPS51	YKR020W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
VPS51	YKR020W	ALG6	Q12001	544 aa	Known RBP	4.89	□□□□□ -1.63
VPS51	YKR020W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-DR6	P0CX70	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-ER1	P0CX71	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-LR2	P0CX72	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-PL	P0CX73	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-JR1	P0CX74	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-LR3	P0CX75	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-ML2	P0CX76	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	PRP40	P33203	583 aa	Known RBP	4.88	□□□□□ -1.63
VPS51	YKR020W	VPS35	P34110	944 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	SAP155	P43612	1002 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	GCV1	P48015	400 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	DOT1	Q04089	582 aa	Known RBP	4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-GR1	Q12085	440 aa		4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.88	□□□□□ -1.63
VPS51	YKR020W	TY1A-OL	Q92392	440 aa	Known RBP	4.88	□□□□□ -1.63
VPS51	YKR020W	PRP5	P21372	849 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS51	YKR020W	REI1	P38344	393 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS51	YKR020W	PEX13	P80667	386 aa		4.87	□□□□□ -1.63
VPS51	YKR020W	YLL054C	Q12244	843 aa		4.87	□□□□□ -1.63
VPS51	YKR020W	SQT1	P35184	431 aa		4.86	□□□□□ -1.63
VPS51	YKR020W	YKL077W	P36081	392 aa		4.86	□□□□□ -1.63
VPS51	YKR020W	GPT2	P36148	743 aa		4.86	□□□□□ -1.63
VPS51	YKR020W	SHU2	P38957	223 aa		4.86	□□□□□ -1.63
VPS51	YKR020W	FAA3	P39002	694 aa		4.86	□□□□□ -1.63
VPS51	YKR020W	POL32	P47110	350 aa		4.86	□□□□□ -1.63
VPS51	YKR020W	KAR2	P16474	682 aa	Known RBP	4.85	□□□□□ -1.63
VPS51	YKR020W	SPO74	P45819	413 aa		4.85	□□□□□ -1.63
VPS51	YKR020W	ULP1	Q02724	621 aa		4.85	□□□□□ -1.63
VPS51	YKR020W	TOS4	Q06266	489 aa		4.85	□□□□□ -1.63
VPS51	YKR020W	GIC2	Q06648	383 aa		4.85	□□□□□ -1.63
VPS51	YKR020W	EXO5	P38289	585 aa		4.84	□□□□□ -1.63
VPS51	YKR020W	MEC3	Q02574	474 aa		4.84	□□□□□ -1.63
VPS51	YKR020W	NOP8	Q08287	484 aa	Predicted RBP	4.84	□□□□□ -1.63
VPS51	YKR020W	WHI3	P34761	661 aa	Known RBP	4.83	□□□□□ -1.64
VPS51	YKR020W	SEA4	P38164	1038 aa		4.83	□□□□□ -1.64
VPS51	YKR020W	MGE1	P38523	228 aa		4.83	□□□□□ -1.64
VPS51	YKR020W	ELA1	P53861	379 aa	Predicted RBP	4.83	□□□□□ -1.64
VPS51	YKR020W	AVO1	Q08236	1176 aa		4.83	□□□□□ -1.64
VPS51	YKR020W	MSH3	P25336	1018 aa		4.82	□□□□□ -1.64
VPS51	YKR020W	SEG2	P34250	1132 aa		4.82	□□□□□ -1.64
VPS51	YKR020W	ATG14	P38270	344 aa		4.82	□□□□□ -1.64
VPS51	YKR020W	MMM1	P41800	426 aa		4.82	□□□□□ -1.64
VPS51	YKR020W	MTR4	P47047	1073 aa	Known RBP	4.82	□□□□□ -1.64
VPS51	YKR020W	ATE1	P16639	503 aa		4.81	□□□□□ -1.64
VPS51	YKR020W	NEM1	P38757	446 aa		4.81	□□□□□ -1.64
VPS51	YKR020W	MSH4	P40965	878 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS51	YKR020W	SLS1	P42900	643 aa		4.81	□□□□□ -1.64
VPS51	YKR020W	PEX28	P38848	579 aa		4.8	□□□□□ -1.64
VPS51	YKR020W	XKS1	P42826	600 aa		4.8	□□□□□ -1.64
VPS51	YKR020W	YGR045C	P53229	120 aa		4.8	□□□□□ -1.64
VPS51	YKR020W	YNR063W	P53749	607 aa		4.8	□□□□□ -1.64
VPS51	YKR020W	SDH1	Q00711	640 aa		4.8	□□□□□ -1.64
VPS51	YKR020W	MSB1	P21339	1137 aa	Known RBP	4.79	□□□□□ -1.64
VPS51	YKR020W	MCM2	P29469	868 aa		4.79	□□□□□ -1.64
VPS51	YKR020W	LRG1	P35688	1017 aa		4.79	□□□□□ -1.64
VPS51	YKR020W	YKL222C	P35995	705 aa		4.79	□□□□□ -1.64
VPS51	YKR020W	ARL1	P38116	183 aa	Known RBP	4.79	□□□□□ -1.64
VPS51	YKR020W	RPS26A	P39938	119 aa	Known RBP	4.79	□□□□□ -1.64
VPS51	YKR020W	RPS26B	P39939	119 aa	Known RBP	4.79	□□□□□ -1.64
VPS51	YKR020W	CIT3	P43635	486 aa		4.79	□□□□□ -1.64
VPS51	YKR020W	NOG1	Q02892	647 aa	Known RBP	4.79	□□□□□ -1.64
VPS51	YKR020W	YPL109C	Q02981	657 aa		4.79	□□□□□ -1.64
VPS51	YKR020W	ADI1	Q03677	179 aa		4.79	□□□□□ -1.64
VPS51	YKR020W	HXK1	P04806	485 aa	Known RBP	4.78	□□□□□ -1.64
VPS51	YKR020W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	RIP-Chip
VPS51	YKR020W	DED1	P06634	604 aa	Known RBP	4.78	□□□□□ -1.64
VPS51	YKR020W	RPS4A	P0CX35	261 aa	Known RBP	4.78	□□□□□ -1.64
VPS51	YKR020W	RPS4B	P0CX36	261 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms