RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YPL034WQ03083 165 aa3.26□□□□□ -1.89
SNU114YKL173W IOC3P43596 787 aa3.26□□□□□ -1.89
SNU114YKL173W SVF1Q05515 481 aa3.26□□□□□ -1.89
SNU114YKL173W HEM13P11353 328 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W VPS35P34110 944 aa3.25□□□□□ -1.89
SNU114YKL173W BRN1P38170 754 aa3.25□□□□□ -1.89
SNU114YKL173W GCV1P48015 400 aa3.25□□□□□ -1.89
SNU114YKL173W SPR28Q04921 423 aa3.25□□□□□ -1.89
SNU114YKL173W REC8Q12188 680 aa3.25□□□□□ -1.89
SNU114YKL173W EXO5P38289 585 aa3.25□□□□□ -1.89
SNU114YKL173W RVS167P39743 482 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W FET4P40988 552 aa3.25□□□□□ -1.89
SNU114YKL173W SAM37P50110 327 aa3.25□□□□□ -1.89
SNU114YKL173W ELG1Q12050 791 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-LR4P0C2I8 440 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W TY1A-DR6P0CX70 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-ER1P0CX71 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-LR2P0CX72 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-PLP0CX73 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-JR1P0CX74 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-LR3P0CX75 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-ML2P0CX76 440 aa3.25□□□□□ -1.89
SNU114YKL173W RDH54P38086 958 aa3.25□□□□□ -1.89
SNU114YKL173W YCS4Q06156 1176 aa3.25□□□□□ -1.89
SNU114YKL173W NOC3Q07896 663 aaPredicted RBP3.25□□□□□ -1.89
SNU114YKL173W TY1A-GR1Q12085 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W TY1A-OLQ92392 440 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W HXK1P04806 485 aaKnown RBP3.24□□□□□ -1.89
SNU114YKL173W TAT2P38967 592 aa3.24□□□□□ -1.89
SNU114YKL173W PMT7Q06644 662 aa3.24□□□□□ -1.89
SNU114YKL173W UGA4P32837 571 aa3.24□□□□□ -1.89
SNU114YKL173W TAT1P38085 619 aa3.24□□□□□ -1.89
SNU114YKL173W JIP5Q06214 492 aaPredicted RBP3.24□□□□□ -1.89
SNU114YKL173W YOL098CQ12496 1037 aa3.23□□□□□ -1.89
SNU114YKL173W MAE1P36013 669 aaKnown RBP3.23□□□□□ -1.89
SNU114YKL173W ARL1P38116 183 aaKnown RBP3.23□□□□□ -1.89
SNU114YKL173W YHL008CP38750 627 aa3.23□□□□□ -1.89
SNU114YKL173W THI12P42883 340 aa3.23□□□□□ -1.89
SNU114YKL173W THI5P43534 340 aa3.23□□□□□ -1.89
SNU114YKL173W THI11P47183 340 aa3.23□□□□□ -1.89
SNU114YKL173W INP52P50942 1183 aa3.23□□□□□ -1.89
SNU114YKL173W MEC3Q02574 474 aa3.23□□□□□ -1.89
SNU114YKL173W THI13Q07748 340 aa3.23□□□□□ -1.89
SNU114YKL173W GCD6P32501 712 aaKnown RBP3.22□□□□□ -1.89
SNU114YKL173W NNF1P47149 201 aa3.22□□□□□ -1.89
SNU114YKL173W SSF2Q12153 453 aaPredicted RBP3.22□□□□□ -1.89
SNU114YKL173W YLR122CQ12312 125 aa3.22□□□□□ -1.89
SNU114YKL173W MCM2P29469 868 aa3.22□□□□□ -1.89
SNU114YKL173W VAC8P39968 578 aa3.22□□□□□ -1.89
SNU114YKL173W BUD6P41697 788 aa3.22□□□□□ -1.89
SNU114YKL173W RNH70P53331 553 aa3.22□□□□□ -1.89
SNU114YKL173W YPL109CQ02981 657 aa3.22□□□□□ -1.89
SNU114YKL173W VPS16Q03308 798 aa3.22□□□□□ -1.89
SNU114YKL173W FPR4Q06205 392 aaPredicted RBP3.22□□□□□ -1.89
SNU114YKL173W CIT2P08679 460 aa3.22□□□□□ -1.89
SNU114YKL173W RSC6P25632 483 aa3.22□□□□□ -1.89
SNU114YKL173W PRP40P33203 583 aaKnown RBP3.22□□□□□ -1.89
SNU114YKL173W SAF1P38352 637 aa3.22□□□□□ -1.89
SNU114YKL173W NEO1P40527 1151 aa3.22□□□□□ -1.89
SNU114YKL173W THO2P53552 1597 aaKnown RBP3.21□□□□□ -1.89
SNU114YKL173W CIC1P38779 376 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W FAA3P39002 694 aa3.21□□□□□ -1.9
SNU114YKL173W KIP3P53086 805 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W UTP22P53254 1237 aaPredicted RBP3.21□□□□□ -1.9
SNU114YKL173W ALD6P54115 500 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W ULP1Q02724 621 aa3.21□□□□□ -1.9
SNU114YKL173W PIN2Q12057 282 aa3.21□□□□□ -1.9
SNU114YKL173W RPT1P33299 467 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W PIC2P40035 300 aa3.21□□□□□ -1.9
SNU114YKL173W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
SNU114YKL173W NMD2P38798 1089 aaKnown RBP3.2□□□□□ -1.9
SNU114YKL173W GNP1P48813 663 aa3.2□□□□□ -1.9
SNU114YKL173W TCB3Q03640 1545 aaKnown RBP3.2□□□□□ -1.9
SNU114YKL173W NAM7P30771 971 aaKnown RBP3.2□□□□□ -1.9
SNU114YKL173W NEM1P38757 446 aa3.2□□□□□ -1.9
SNU114YKL173W YGR122WP53272 402 aa3.2□□□□□ -1.9
SNU114YKL173W TRP3P00937 484 aa3.19□□□□□ -1.9
SNU114YKL173W SEC23P15303 768 aaKnown RBP3.19□□□□□ -1.9
SNU114YKL173W MCM5P29496 775 aaKnown RBP3.19□□□□□ -1.9
SNU114YKL173W YKR073CP36153 106 aa3.19□□□□□ -1.9
SNU114YKL173W MGE1P38523 228 aa3.19□□□□□ -1.9
SNU114YKL173W ALT1P52893 592 aa3.19□□□□□ -1.9
SNU114YKL173W MON1P53129 644 aa3.19□□□□□ -1.9
SNU114YKL173W ADI1Q03677 179 aa3.19□□□□□ -1.9
SNU114YKL173W YOR223WQ12015 292 aa3.19□□□□□ -1.9
SNU114YKL173W VMA4P22203 233 aaKnown RBP3.19□□□□□ -1.9
SNU114YKL173W CTH1P47976 325 aa3.19□□□□□ -1.9
SNU114YKL173W YGL140CP53120 1219 aa3.19□□□□□ -1.9
SNU114YKL173W INO80P53115 1489 aa3.19□□□□□ -1.9
SNU114YKL173W MSH3P25336 1018 aa3.19□□□□□ -1.9
SNU114YKL173W SEA4P38164 1038 aa3.19□□□□□ -1.9
SNU114YKL173W RPN4Q03465 531 aa3.19□□□□□ -1.9
SNU114YKL173W CYC8P14922 966 aa3.18□□□□□ -1.9
SNU114YKL173W HXT13P39924 564 aa3.18□□□□□ -1.9
SNU114YKL173W SLS1P42900 643 aa3.18□□□□□ -1.9
SNU114YKL173W HXT17P53631 564 aa3.18□□□□□ -1.9
SNU114YKL173W HXT15P54854 567 aa3.18□□□□□ -1.9
SNU114YKL173W UTP5Q04177 643 aaKnown RBP3.18□□□□□ -1.9
SNU114YKL173W DAL4Q04895 635 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms