RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	MAK16	P10962	306 aa	Predicted RBP	4.16	□□□□□ -1.74
SOD1	YJR104C	PCT1	P13259	424 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	MIP1	P15801	1254 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	GRS1	P38088	690 aa	Known RBP	4.16	□□□□□ -1.74
SOD1	YJR104C	NET1	P47035	1189 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	MTC3	P53077	123 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	BNI4	P53858	892 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	ERF2	Q06551	359 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	SUB2	Q07478	446 aa	Known RBP	4.16	□□□□□ -1.74
SOD1	YJR104C	TY3A-G	Q12173	290 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	TY3A-I	Q99219	290 aa		4.16	□□□□□ -1.74
SOD1	YJR104C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SOD1	YJR104C	YDJ1	P25491	409 aa	Known RBP	4.15	□□□□□ -1.75
SOD1	YJR104C	MSP1	P28737	362 aa		4.15	□□□□□ -1.75
SOD1	YJR104C	SPT23	P35210	1082 aa		4.15	□□□□□ -1.75
SOD1	YJR104C	PTC2	P39966	464 aa	Known RBP	4.15	□□□□□ -1.75
SOD1	YJR104C	DJP1	P40564	432 aa		4.15	□□□□□ -1.75
SOD1	YJR104C	STR2	P47164	639 aa		4.15	□□□□□ -1.75
SOD1	YJR104C	ISM1	P48526	1002 aa		4.15	□□□□□ -1.75
SOD1	YJR104C	BRE5	P53741	515 aa	Known RBP	4.15	□□□□□ -1.75
SOD1	YJR104C	RMT2	Q03305	412 aa		4.15	□□□□□ -1.75
SOD1	YJR104C	PRP3	Q03338	469 aa	Predicted RBP	4.15	□□□□□ -1.75
SOD1	YJR104C	ENO2	P00925	437 aa	Known RBP	4.14	□□□□□ -1.75
SOD1	YJR104C	SUP45	P12385	437 aa	Known RBP	4.14	□□□□□ -1.75
SOD1	YJR104C	SIS1	P25294	352 aa	Known RBP	4.14	□□□□□ -1.75
SOD1	YJR104C	PAT1	P25644	796 aa	Known RBP	4.14	□□□□□ -1.75
SOD1	YJR104C	BYE1	P36106	594 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	GEF1	P37020	779 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	DSN1	P40568	576 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	YJL171C	P46992	396 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	TAN1	P53072	289 aa	Predicted RBP	4.14	□□□□□ -1.75
SOD1	YJR104C	NNF2	P53253	936 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	NAF1	P53919	492 aa	Known RBP	4.14	□□□□□ -1.75
SOD1	YJR104C	CDC45	Q08032	650 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	YDL206W	Q12424	762 aa		4.14	□□□□□ -1.75
SOD1	YJR104C	RPP0	P05317	312 aa	Known RBP	4.13	□□□□□ -1.75
SOD1	YJR104C	RAM1	P22007	431 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	CDC60	P26637	1090 aa	Known RBP	4.13	□□□□□ -1.75
SOD1	YJR104C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SOD1	YJR104C	LTV1	P34078	463 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	TTI1	P36097	1038 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	ARL1	P38116	183 aa	Known RBP	4.13	□□□□□ -1.75
SOD1	YJR104C	SIC1	P38634	284 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	TCD1	P38756	429 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	TPM2	P40414	161 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	OYE3	P41816	400 aa	Predicted RBP	4.13	□□□□□ -1.75
SOD1	YJR104C	RSC8	P43609	557 aa	Known RBP	4.13	□□□□□ -1.75
SOD1	YJR104C	TUB4	P53378	473 aa		4.13	□□□□□ -1.75
SOD1	YJR104C	RPL34A	P87262	121 aa	Predicted RBP	4.13	□□□□□ -1.75
SOD1	YJR104C	ENO1	P00924	437 aa	Known RBP	4.12	□□□□□ -1.75
SOD1	YJR104C	SRP54	P20424	541 aa	Known RBP	4.12	□□□□□ -1.75
SOD1	YJR104C	MSH3	P25336	1018 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	KTR2	P33550	425 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	JHD1	P40034	492 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	MCM6	P53091	1017 aa	Known RBP	4.12	□□□□□ -1.75
SOD1	YJR104C	DOS2	P54858	310 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	ECM16	Q04217	1267 aa	Known RBP	4.12	□□□□□ -1.75
SOD1	YJR104C	YDR344C	Q05510	147 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	ESC2	Q06340	456 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	ALR1	Q08269	859 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	LSP1	Q12230	341 aa	Known RBP	4.12	□□□□□ -1.75
SOD1	YJR104C	BMT6	Q12291	365 aa		4.12	□□□□□ -1.75
SOD1	YJR104C	AIR2	Q12476	344 aa	Known RBP	4.12	□□□□□ -1.75
SOD1	YJR104C	PRT1	P06103	763 aa	Known RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	SPE2	P21182	396 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	KNS1	P32350	737 aa	Predicted RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	KSP1	P38691	1029 aa	Known RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	VPS27	P40343	622 aa	Known RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	RIM21	P48565	533 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	RPA14	P50106	137 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	KXD1	P53158	218 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	RNT1	Q02555	471 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	VPS60	Q03390	229 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	BUD20	Q08004	166 aa	Predicted RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	CFT2	Q12102	859 aa	Predicted RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	MCM16	Q12262	181 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	ADR1	P07248	1323 aa		4.11	□□□□□ -1.75
SOD1	YJR104C	SSK22	P25390	1331 aa	Predicted RBP	4.11	□□□□□ -1.75
SOD1	YJR104C	TY1A-DR4	O74302	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-H	P0C2I4	478 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-A	P0CX57	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-PR1	P0CX58	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-OR	P0CX59	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-PR2	P0CX60	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-DR5	P0CX65	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-ER2	P0CX66	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-GR3	P0CX67	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-LR1	P0CX68	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-MR2	P0CX69	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	MCM3	P24279	971 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	KRE2	P27809	442 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	SPT16	P32558	1035 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	SWE1	P32944	819 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	MED8	P38304	223 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	PRE3	P38624	215 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	CIN4	P39110	191 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	MXR1	P40029	184 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	RRN7	P40992	514 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-JR2	P47099	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	YJR107W	P47145	328 aa		4.1	□□□□□ -1.75

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