RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	RPT1	P33299	467 aa	Known RBP	4.43	□□□□□ -1.7
YPS6	YIR039C	RPO21	P04050	1733 aa	Known RBP	4.42	□□□□□ -1.7
YPS6	YIR039C	MRPL33	P20084	86 aa		4.42	□□□□□ -1.7
YPS6	YIR039C	KAP122	P32767	1081 aa		4.42	□□□□□ -1.7
YPS6	YIR039C	DAK2	P43550	591 aa		4.42	□□□□□ -1.7
YPS6	YIR039C	ALO1	P54783	526 aa	Known RBP	4.42	□□□□□ -1.7
YPS6	YIR039C	RMD1	Q03441	430 aa		4.42	□□□□□ -1.7
YPS6	YIR039C	SPR28	Q04921	423 aa		4.42	□□□□□ -1.7
YPS6	YIR039C	RPP1A	P05318	106 aa	Predicted RBP	4.41	□□□□□ -1.7
YPS6	YIR039C	VMA3	P25515	160 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	GCD6	P32501	712 aa	Known RBP	4.41	□□□□□ -1.7
YPS6	YIR039C	LDH1	P38139	375 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	MSC7	P38694	644 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	QDR2	P40474	542 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	DOS2	P54858	310 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	NUP159	P40477	1460 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	NUP170	P38181	1502 aa		4.41	□□□□□ -1.7
YPS6	YIR039C	LEU1	P07264	779 aa	Known RBP	4.4	□□□□□ -1.7
YPS6	YIR039C	RGP1	P16664	663 aa		4.4	□□□□□ -1.7
YPS6	YIR039C	YBT1	P32386	1661 aa		4.4	□□□□□ -1.7
YPS6	YIR039C	BRN1	P38170	754 aa		4.4	□□□□□ -1.7
YPS6	YIR039C	GEA2	P39993	1459 aa	Known RBP	4.4	□□□□□ -1.7
YPS6	YIR039C	ALD3	P54114	506 aa		4.4	□□□□□ -1.7
YPS6	YIR039C	VPS16	Q03308	798 aa		4.4	□□□□□ -1.7
YPS6	YIR039C	YOL098C	Q12496	1037 aa		4.4	□□□□□ -1.7
YPS6	YIR039C	VPS15	P22219	1454 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	VPS35	P34110	944 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	SPC42	P36094	363 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	OMA1	P36163	345 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	DYS1	P38791	387 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	IRC24	P40580	263 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	SUT1	P53032	299 aa	Known RBP	4.39	□□□□□ -1.71
YPS6	YIR039C	ALD6	P54115	500 aa	Known RBP	4.39	□□□□□ -1.71
YPS6	YIR039C	CDC55	Q00362	526 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	PIN2	Q12057	282 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	IRC20	Q06554	1556 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	VAC8	P39968	578 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	FIR1	P40020	876 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	INP52	P50942	1183 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	YNL011C	P53980	444 aa		4.39	□□□□□ -1.71
YPS6	YIR039C	NMD2	P38798	1089 aa	Known RBP	4.38	□□□□□ -1.71
YPS6	YIR039C	RPS26A	P39938	119 aa	Known RBP	4.38	□□□□□ -1.71
YPS6	YIR039C	RPS26B	P39939	119 aa	Known RBP	4.38	□□□□□ -1.71
YPS6	YIR039C	MAD1	P40957	749 aa		4.38	□□□□□ -1.71
YPS6	YIR039C	YGR122W	P53272	402 aa		4.38	□□□□□ -1.71
YPS6	YIR039C	NHA1	Q99271	985 aa		4.38	□□□□□ -1.71
YPS6	YIR039C	GDB1	Q06625	1536 aa		4.38	□□□□□ -1.71
YPS6	YIR039C	YRF1-1	P0CX20	1796 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	YRF1-5	P0CX21	1796 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	YRF1-8	P0CX22	1796 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	SMC1	P32908	1225 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	HXT8	P40886	569 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	SAM37	P50110	327 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	CUS1	Q02554	436 aa	Predicted RBP	4.37	□□□□□ -1.71
YPS6	YIR039C	ESF1	Q06344	628 aa	Known RBP	4.37	□□□□□ -1.71
YPS6	YIR039C	CAT8	P39113	1433 aa		4.37	□□□□□ -1.71
YPS6	YIR039C	CYC8	P14922	966 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	CLN2	P20438	545 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	PGM2	P37012	569 aa	Known RBP	4.36	□□□□□ -1.71
YPS6	YIR039C	NCL1	P38205	684 aa	Known RBP	4.36	□□□□□ -1.71
YPS6	YIR039C	YBR287W	P38355	427 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	APM2	P38700	605 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	BUD9	P53226	547 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	YAF9	P53930	226 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	RSC4	Q02206	625 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	TOS4	Q06266	489 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	SPO14	P36126	1683 aa		4.36	□□□□□ -1.71
YPS6	YIR039C	ISW1	P38144	1129 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	GIP1	P38229	639 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	CIC1	P38779	376 aa	Known RBP	4.35	□□□□□ -1.71
YPS6	YIR039C	IOC3	P43596	787 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	NOC3	Q07896	663 aa	Predicted RBP	4.35	□□□□□ -1.71
YPS6	YIR039C	SSF2	Q12153	453 aa	Predicted RBP	4.35	□□□□□ -1.71
YPS6	YIR039C	BUD3	P25558	1636 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	NUP157	P40064	1391 aa	Known RBP	4.35	□□□□□ -1.71
YPS6	YIR039C	HXK1	P04806	485 aa	Known RBP	4.35	□□□□□ -1.71
YPS6	YIR039C	RPC31	P17890	251 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	MSN1	P22148	382 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	PEP7	P32609	515 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	MNR2	P35724	969 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	ALG14	P38242	237 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	SKP1	P52286	194 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	YOR296W	Q08748	1289 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	OXR1	Q08952	273 aa		4.35	□□□□□ -1.71
YPS6	YIR039C	ARO1	P08566	1588 aa	Known RBP	4.34	□□□□□ -1.71
YPS6	YIR039C	PDR10	P51533	1564 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	RAD2	P07276	1031 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	PET112	P33893	541 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	FAA3	P39002	694 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	YJL049W	P47048	450 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	RNH70	P53331	553 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	BSC2	Q05611	235 aa		4.34	□□□□□ -1.71
YPS6	YIR039C	MET5	P47169	1442 aa		4.33	□□□□□ -1.72
YPS6	YIR039C	BSD2	P38356	321 aa		4.33	□□□□□ -1.72
YPS6	YIR039C	RAD55	P38953	406 aa		4.33	□□□□□ -1.72
YPS6	YIR039C	NTA1	P40354	457 aa		4.33	□□□□□ -1.72
YPS6	YIR039C	FAR11	P53917	953 aa		4.33	□□□□□ -1.72
YPS6	YIR039C	HEH2	Q03281	663 aa		4.33	□□□□□ -1.72
YPS6	YIR039C	SRB8	P25648	1427 aa		4.32	□□□□□ -1.72
YPS6	YIR039C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.32	□□□□□ -1.72	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms