RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W NRD1P53617 575 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08 RIP-Chip
LSM12YHR121W GIC2Q06648 383 aa8.33□□□□□ -1.08
LSM12YHR121W MED7Q08278 222 aa8.33□□□□□ -1.08
LSM12YHR121W GLT1Q12680 2145 aaKnown RBP8.32□□□□□ -1.08
LSM12YHR121W VPS35P34110 944 aa8.32□□□□□ -1.08
LSM12YHR121W OMA1P36163 345 aa8.32□□□□□ -1.08
LSM12YHR121W SHU2P38957 223 aa8.32□□□□□ -1.08
LSM12YHR121W MEC3Q02574 474 aa8.32□□□□□ -1.08
LSM12YHR121W PHO4P07270 312 aaKnown RBP8.31□□□□□ -1.08
LSM12YHR121W DOT1Q04089 582 aaKnown RBP8.31□□□□□ -1.08
LSM12YHR121W SLD2P34252 453 aa8.3□□□□□ -1.08
LSM12YHR121W MSB1P21339 1137 aaKnown RBP8.29□□□□□ -1.08
LSM12YHR121W MET4P32389 672 aa8.29□□□□□ -1.08
LSM12YHR121W YGR130CP53278 816 aa8.29□□□□□ -1.08
LSM12YHR121W OXR1Q08952 273 aa8.29□□□□□ -1.08
LSM12YHR121W WHI5Q12416 295 aa8.29□□□□□ -1.08
LSM12YHR121W KAR2P16474 682 aaKnown RBP8.28□□□□□ -1.08
LSM12YHR121W YKL077WP36081 392 aa8.28□□□□□ -1.08
LSM12YHR121W YKR073CP36153 106 aa8.28□□□□□ -1.08
LSM12YHR121W REI1P38344 393 aaPredicted RBP8.28□□□□□ -1.08
LSM12YHR121W TRP3P00937 484 aa8.27□□□□□ -1.09
LSM12YHR121W PRP40P33203 583 aaKnown RBP8.27□□□□□ -1.09
LSM12YHR121W GPT2P36148 743 aa8.27□□□□□ -1.09
LSM12YHR121W ARL1P38116 183 aaKnown RBP8.27□□□□□ -1.09
LSM12YHR121W SPO74P45819 413 aa8.27□□□□□ -1.09
LSM12YHR121W INP52P50942 1183 aa8.27□□□□□ -1.09
LSM12YHR121W TOS1P38288 455 aa8.26□□□□□ -1.09
LSM12YHR121W IPL1P38991 367 aa8.26□□□□□ -1.09
LSM12YHR121W DAK2P43550 591 aa8.26□□□□□ -1.09
LSM12YHR121W MMM1P41800 426 aa8.25□□□□□ -1.09
LSM12YHR121W SEN54Q02825 467 aaPredicted RBP8.25□□□□□ -1.09
LSM12YHR121W CYC7P00045 113 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-LR4P0C2I8 440 aaKnown RBP8.24□□□□□ -1.09
LSM12YHR121W TY1A-DR6P0CX70 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-ER1P0CX71 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-LR2P0CX72 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-PLP0CX73 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-JR1P0CX74 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-LR3P0CX75 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-ML2P0CX76 440 aa8.24□□□□□ -1.09
LSM12YHR121W DAL4Q04895 635 aa8.24□□□□□ -1.09
LSM12YHR121W ALG6Q12001 544 aaKnown RBP8.24□□□□□ -1.09
LSM12YHR121W TY1A-GR1Q12085 440 aa8.24□□□□□ -1.09
LSM12YHR121W TY1A-PR3Q6Q5H1 440 aaKnown RBP8.24□□□□□ -1.09
LSM12YHR121W TY1A-OLQ92392 440 aaKnown RBP8.24□□□□□ -1.09
LSM12YHR121W LIP5P32875 414 aa8.23□□□□□ -1.09
LSM12YHR121W EXO5P38289 585 aa8.23□□□□□ -1.09
LSM12YHR121W RSM26P47141 266 aa8.23□□□□□ -1.09
LSM12YHR121W AVO1Q08236 1176 aa8.23□□□□□ -1.09
LSM12YHR121W SQT1P35184 431 aa8.22□□□□□ -1.09
LSM12YHR121W CIT3P43635 486 aa8.22□□□□□ -1.09
LSM12YHR121W NOG1Q02892 647 aaKnown RBP8.22□□□□□ -1.09
LSM12YHR121W NSI1Q12457 570 aa8.22□□□□□ -1.09
LSM12YHR121W MTR4P47047 1073 aaKnown RBP8.21□□□□□ -1.1
LSM12YHR121W YOR059CQ08448 450 aaKnown RBP8.21□□□□□ -1.1
LSM12YHR121W RPT1P33299 467 aaKnown RBP8.2□□□□□ -1.1
LSM12YHR121W ULP1Q02724 621 aa8.2□□□□□ -1.1
LSM12YHR121W YML020WQ03722 664 aa8.2□□□□□ -1.1
LSM12YHR121W PUB1P32588 453 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
LSM12YHR121W WHI3P34761 661 aaKnown RBP8.19□□□□□ -1.1
LSM12YHR121W MSH4P40965 878 aaPredicted RBP8.19□□□□□ -1.1
LSM12YHR121W PEX13P80667 386 aa8.19□□□□□ -1.1
LSM12YHR121W MSH3P25336 1018 aa8.18□□□□□ -1.1
LSM12YHR121W UGA4P32837 571 aa8.18□□□□□ -1.1
LSM12YHR121W YGR045CP53229 120 aa8.18□□□□□ -1.1
LSM12YHR121W ELA1P53861 379 aaPredicted RBP8.18□□□□□ -1.1
LSM12YHR121W BRE4Q07660 1125 aa8.18□□□□□ -1.1
LSM12YHR121W RPS4AP0CX35 261 aaKnown RBP8.17□□□□□ -1.1
LSM12YHR121W RPS4BP0CX36 261 aaKnown RBP8.17□□□□□ -1.1
LSM12YHR121W SMY2P32909 740 aaKnown RBP8.17□□□□□ -1.1
LSM12YHR121W NNK1P36003 928 aa8.17□□□□□ -1.1
LSM12YHR121W ATG14P38270 344 aa8.17□□□□□ -1.1
LSM12YHR121W SLS1P42900 643 aa8.17□□□□□ -1.1
LSM12YHR121W NEM1P38757 446 aa8.16□□□□□ -1.1
LSM12YHR121W ALT1P52893 592 aa8.16□□□□□ -1.1
LSM12YHR121W MAG2Q06436 670 aaKnown RBP8.16□□□□□ -1.1
LSM12YHR121W VMA4P22203 233 aaKnown RBP8.15□□□□□ -1.1
LSM12YHR121W NFS1P25374 497 aa8.15□□□□□ -1.1
LSM12YHR121W RCM1P53972 490 aa8.15□□□□□ -1.1
LSM12YHR121W ADI1Q03677 179 aa8.15□□□□□ -1.1
LSM12YHR121W YAR028WP39548 234 aa8.14□□□□□ -1.11
LSM12YHR121W YPL109CQ02981 657 aa8.14□□□□□ -1.11
LSM12YHR121W NOP8Q08287 484 aaPredicted RBP8.14□□□□□ -1.11
LSM12YHR121W MGE1P38523 228 aa8.13□□□□□ -1.11
LSM12YHR121W HSE1P38753 452 aa8.13□□□□□ -1.11
LSM12YHR121W PEX28P38848 579 aa8.13□□□□□ -1.11
LSM12YHR121W FAA3P39002 694 aa8.13□□□□□ -1.11
LSM12YHR121W CTH1P47976 325 aa8.13□□□□□ -1.11
LSM12YHR121W UTP5Q04177 643 aaKnown RBP8.13□□□□□ -1.11
LSM12YHR121W TOS4Q06266 489 aa8.13□□□□□ -1.11
LSM12YHR121W HXK1P04806 485 aaKnown RBP8.12□□□□□ -1.11
LSM12YHR121W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
LSM12YHR121W XKS1P42826 600 aa8.12□□□□□ -1.11
LSM12YHR121W SDH1Q00711 640 aa8.12□□□□□ -1.11
LSM12YHR121W LAP2Q10740 671 aa8.12□□□□□ -1.11
LSM12YHR121W GCD1P09032 578 aaPredicted RBP8.11□□□□□ -1.11
LSM12YHR121W POL32P47110 350 aa8.11□□□□□ -1.11
LSM12YHR121W YGR122WP53272 402 aa8.1□□□□□ -1.11
LSM12YHR121W OYE3P41816 400 aaPredicted RBP8.09□□□□□ -1.11
LSM12YHR121W MCD1Q12158 566 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms