RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	OSH2	Q12451	1283 aa		5.53	□□□□□ -1.52
VMA22	YHR060W	GAL11	P19659	1081 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	THI4	P32318	326 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	SCT1	P32784	759 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	FAA3	P39002	694 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	UBP12	P39538	1254 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	SPF1	P39986	1215 aa	Known RBP	5.52	□□□□□ -1.53
VMA22	YHR060W	FAA4	P47912	694 aa	Known RBP	5.52	□□□□□ -1.53
VMA22	YHR060W	RSC2	Q06488	889 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	YOL057W	Q08225	711 aa		5.52	□□□□□ -1.53
VMA22	YHR060W	INP54	Q08227	384 aa	Known RBP	5.52	□□□□□ -1.53
VMA22	YHR060W	MRC1	P25588	1096 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	RAD27	P26793	382 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	PRP40	P33203	583 aa	Known RBP	5.51	□□□□□ -1.53
VMA22	YHR060W	IRS4	P36115	615 aa	Known RBP	5.51	□□□□□ -1.53
VMA22	YHR060W	BSD2	P38356	321 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	CRP1	P38845	465 aa	Known RBP	5.51	□□□□□ -1.53
VMA22	YHR060W	TAT2	P38967	592 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	YER156C	P40093	338 aa	Known RBP	5.51	□□□□□ -1.53
VMA22	YHR060W	ITC1	P53125	1264 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	YGR053C	P53234	283 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	TY1A-DR2	Q03964	440 aa	Known RBP	5.51	□□□□□ -1.53
VMA22	YHR060W	PPM2	Q08282	695 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	RTT10	Q08924	1013 aa		5.51	□□□□□ -1.53
VMA22	YHR060W	FAL1	Q12099	399 aa	Known RBP	5.51	□□□□□ -1.53
VMA22	YHR060W	PRI2	P20457	528 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	SRM1	P21827	482 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	KNS1	P32350	737 aa	Predicted RBP	5.5	□□□□□ -1.53
VMA22	YHR060W	TIM23	P32897	222 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	ECM2	P38241	364 aa	Known RBP	5.5	□□□□□ -1.53
VMA22	YHR060W	MSC7	P38694	644 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	AIM46	P38885	310 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	RGD2	P43556	714 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	TYW3	P53177	273 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	YNR040W	P53736	256 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	FLC1	Q08967	793 aa		5.5	□□□□□ -1.53
VMA22	YHR060W	NOP14	Q99207	810 aa	Known RBP	5.5	□□□□□ -1.53
VMA22	YHR060W	DPB3	P27344	201 aa		5.49	□□□□□ -1.53
VMA22	YHR060W	KTR2	P33550	425 aa		5.49	□□□□□ -1.53
VMA22	YHR060W	YEN1	P40028	759 aa		5.49	□□□□□ -1.53
VMA22	YHR060W	YIL165C	P40446	119 aa		5.49	□□□□□ -1.53
VMA22	YHR060W	BUD21	Q08492	214 aa	Predicted RBP	5.49	□□□□□ -1.53
VMA22	YHR060W	GPM1	P00950	247 aa	Known RBP	5.48	□□□□□ -1.53
VMA22	YHR060W	SFP1	P32432	683 aa		5.48	□□□□□ -1.53
VMA22	YHR060W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	RIP-Chip
VMA22	YHR060W	PSY2	P40164	858 aa		5.48	□□□□□ -1.53
VMA22	YHR060W	YPL109C	Q02981	657 aa		5.48	□□□□□ -1.53
VMA22	YHR060W	CEF1	Q03654	590 aa	Predicted RBP	5.48	□□□□□ -1.53
VMA22	YHR060W	ADI1	Q03677	179 aa		5.48	□□□□□ -1.53
VMA22	YHR060W	VMS1	Q04311	632 aa	Known RBP	5.48	□□□□□ -1.53
VMA22	YHR060W	FLP1	P03870	423 aa		5.47	□□□□□ -1.53
VMA22	YHR060W	PDC5	P16467	563 aa	Known RBP	5.47	□□□□□ -1.53
VMA22	YHR060W	HSP60	P19882	572 aa	Known RBP	5.47	□□□□□ -1.53
VMA22	YHR060W	MRP8	P35719	219 aa		5.47	□□□□□ -1.53
VMA22	YHR060W	RSP5	P39940	809 aa	Known RBP	5.47	□□□□□ -1.53
VMA22	YHR060W	PRK1	P40494	810 aa		5.47	□□□□□ -1.53
VMA22	YHR060W	YGR125W	P53273	1036 aa		5.47	□□□□□ -1.53
VMA22	YHR060W	TIF6	Q12522	245 aa	Known RBP	5.47	□□□□□ -1.53
VMA22	YHR060W	AI1	P03875	834 aa		5.46	□□□□□ -1.54
VMA22	YHR060W	TAF13	P11747	167 aa		5.46	□□□□□ -1.54
VMA22	YHR060W	IDI1	P15496	288 aa		5.46	□□□□□ -1.54
VMA22	YHR060W	PAF1	P38351	445 aa		5.46	□□□□□ -1.54
VMA22	YHR060W	SPO20	Q04359	397 aa		5.46	□□□□□ -1.54
VMA22	YHR060W	TOS4	Q06266	489 aa		5.46	□□□□□ -1.54
VMA22	YHR060W	EMG1	Q06287	252 aa	Known RBP	5.46	□□□□□ -1.54
VMA22	YHR060W	BAS1	P22035	811 aa		5.45	□□□□□ -1.54
VMA22	YHR060W	DUT1	P33317	147 aa		5.45	□□□□□ -1.54
VMA22	YHR060W	SQT1	P35184	431 aa		5.45	□□□□□ -1.54
VMA22	YHR060W	YHR020W	P38708	688 aa	Known RBP	5.45	□□□□□ -1.54
VMA22	YHR060W	RVS167	P39743	482 aa	Known RBP	5.45	□□□□□ -1.54
VMA22	YHR060W	SNF7	P39929	240 aa	Known RBP	5.45	□□□□□ -1.54
VMA22	YHR060W	HUL4	P40985	892 aa		5.45	□□□□□ -1.54
VMA22	YHR060W	ERP6	P53198	216 aa		5.45	□□□□□ -1.54
VMA22	YHR060W	ULP1	Q02724	621 aa		5.45	□□□□□ -1.54
VMA22	YHR060W	KAR1	P11927	433 aa		5.44	□□□□□ -1.54
VMA22	YHR060W	MCM5	P29496	775 aa	Known RBP	5.44	□□□□□ -1.54
VMA22	YHR060W	PMC1	P38929	1173 aa	Predicted RBP	5.44	□□□□□ -1.54
VMA22	YHR060W	GEM1	P39722	662 aa		5.44	□□□□□ -1.54
VMA22	YHR060W	IRR1	P40541	1150 aa		5.44	□□□□□ -1.54
VMA22	YHR060W	PPT1	P53043	513 aa		5.44	□□□□□ -1.54
VMA22	YHR060W	DNM1	P54861	757 aa		5.44	□□□□□ -1.54
VMA22	YHR060W	SHE9	Q04172	456 aa		5.44	□□□□□ -1.54
VMA22	YHR060W	CIT1	P00890	479 aa		5.43	□□□□□ -1.54
VMA22	YHR060W	GCR1	P07261	785 aa		5.43	□□□□□ -1.54
VMA22	YHR060W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
VMA22	YHR060W	AGP1	P25376	633 aa		5.43	□□□□□ -1.54
VMA22	YHR060W	PWP2	P25635	923 aa	Known RBP	5.43	□□□□□ -1.54
VMA22	YHR060W	URN1	Q06525	465 aa	Known RBP	5.43	□□□□□ -1.54
VMA22	YHR060W	MRL1	Q06815	381 aa		5.43	□□□□□ -1.54
VMA22	YHR060W	GIN4	Q12263	1142 aa		5.43	□□□□□ -1.54
VMA22	YHR060W	ADR1	P07248	1323 aa		5.43	□□□□□ -1.54
VMA22	YHR060W	CAN1	P04817	590 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	MSH2	P25847	964 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	SBA1	P28707	216 aa	Known RBP	5.42	□□□□□ -1.54
VMA22	YHR060W	SEC6	P32844	805 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	YKL069W	P36088	180 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	YBR184W	P38299	523 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
VMA22	YHR060W	RSM26	P47141	266 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	ENT3	P47160	408 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms