RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	GFD2	P25370	566 aa	Known RBP	4.98	□□□□□ -1.61
PFK1	YGR240C	SPC110	P32380	944 aa		4.98	□□□□□ -1.61
PFK1	YGR240C	IME2	P32581	645 aa		4.98	□□□□□ -1.61
PFK1	YGR240C	ARC19	P33204	171 aa	Known RBP	4.98	□□□□□ -1.61
PFK1	YGR240C	YKL100C	P34248	587 aa		4.98	□□□□□ -1.61
PFK1	YGR240C	CHZ1	P40019	153 aa	Predicted RBP	4.98	□□□□□ -1.61
PFK1	YGR240C	TSR2	Q06672	205 aa	Known RBP	4.98	□□□□□ -1.61
PFK1	YGR240C	CLP1	Q08685	445 aa	Predicted RBP	4.98	□□□□□ -1.61
PFK1	YGR240C	UBP1	P25037	809 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	MSH2	P25847	964 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	KTR1	P27810	393 aa	Known RBP	4.97	□□□□□ -1.61
PFK1	YGR240C	MIF2	P35201	549 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	RTG3	P38165	486 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PFK1	YGR240C	RNH1	Q04740	348 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	UTP13	Q05946	817 aa	Known RBP	4.97	□□□□□ -1.61
PFK1	YGR240C	FKS3	Q04952	1785 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	AUS1	Q08409	1394 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	ENO1	P00924	437 aa	Known RBP	4.97	□□□□□ -1.61
PFK1	YGR240C	YEF3	P16521	1044 aa	Known RBP	4.97	□□□□□ -1.61
PFK1	YGR240C	YKL050C	P35736	922 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	SAP185	P40856	1058 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	VTC2	P43585	828 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	SND1	Q04007	877 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	TAP42	Q04372	366 aa		4.97	□□□□□ -1.61
PFK1	YGR240C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PFK1	YGR240C	SUP45	P12385	437 aa	Known RBP	4.96	□□□□□ -1.61
PFK1	YGR240C	CDC60	P26637	1090 aa	Known RBP	4.96	□□□□□ -1.61
PFK1	YGR240C	SMY2	P32909	740 aa	Known RBP	4.96	□□□□□ -1.61
PFK1	YGR240C	FYV10	P40492	516 aa		4.96	□□□□□ -1.61
PFK1	YGR240C	YDR286C	Q05530	114 aa		4.96	□□□□□ -1.61
PFK1	YGR240C	PPM2	Q08282	695 aa		4.96	□□□□□ -1.61
PFK1	YGR240C	URB1	P34241	1764 aa	Known RBP	4.96	□□□□□ -1.62
PFK1	YGR240C	RPP0	P05317	312 aa	Known RBP	4.96	□□□□□ -1.62
PFK1	YGR240C	PHO8	P11491	566 aa		4.96	□□□□□ -1.62
PFK1	YGR240C	PRS1	P32895	427 aa	Known RBP	4.96	□□□□□ -1.62
PFK1	YGR240C	RCR1	P38212	213 aa		4.96	□□□□□ -1.62
PFK1	YGR240C	MEF2	P39677	819 aa		4.96	□□□□□ -1.62
PFK1	YGR240C	HUL5	P53119	910 aa		4.96	□□□□□ -1.62
PFK1	YGR240C	RCM1	P53972	490 aa		4.96	□□□□□ -1.62
PFK1	YGR240C	MDM38	Q08179	573 aa		4.96	□□□□□ -1.62
PFK1	YGR240C	CLN2	P20438	545 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	RPC37	P36121	282 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	RRF1	P38771	230 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	VID30	P53076	958 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	YGR130C	P53278	816 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	UBX4	P54730	416 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	ARV1	Q06541	321 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	PGI1	P12709	554 aa	Known RBP	4.95	□□□□□ -1.62
PFK1	YGR240C	VPS41	P38959	992 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	CCT3	P39077	534 aa	Known RBP	4.95	□□□□□ -1.62
PFK1	YGR240C	GTT3	P39996	337 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	MTO1	P53070	669 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	TMA17	Q12513	150 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	YOL087C	Q99247	1116 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	CIT1	P00890	479 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	SUP35	P05453	685 aa	Known RBP	4.95	□□□□□ -1.62
PFK1	YGR240C	TIM23	P32897	222 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	MRX10	Q05648	414 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	YLH47	Q06493	454 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	FRT1	Q99332	602 aa		4.95	□□□□□ -1.62
PFK1	YGR240C	TUF1	P02992	437 aa	Known RBP	4.94	□□□□□ -1.62
PFK1	YGR240C	RED1	P14291	827 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	PET123	P17558	318 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	SAP190	P36123	1033 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	TBS1	P38114	1094 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	NIT1	P40447	199 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	CTR9	P89105	1077 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	RAD33	Q04231	177 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	GGA1	Q06336	557 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	PGC1	Q08959	321 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	PGS1	P25578	521 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	MCM2	P29469	868 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	NOP4	P37838	685 aa	Known RBP	4.94	□□□□□ -1.62
PFK1	YGR240C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	RIP-Chip
PFK1	YGR240C	TAT2	P38967	592 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	POP2	P39008	433 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	SWA2	Q06677	668 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	YLR125W	Q12138	136 aa		4.94	□□□□□ -1.62
PFK1	YGR240C	HNM1	P19807	563 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	MET4	P32389	672 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	MRS6	P32864	603 aa	Known RBP	4.93	□□□□□ -1.62
PFK1	YGR240C	ATG19	P35193	415 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	NUP120	P35729	1037 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	CSE4	P36012	229 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	ESL1	P40456	1118 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	IRR1	P40541	1150 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	YJR120W	P47157	116 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	GYP7	P48365	746 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	YNL247W	P53852	767 aa	Known RBP	4.93	□□□□□ -1.62
PFK1	YGR240C	SPP382	Q06411	708 aa	Predicted RBP	4.93	□□□□□ -1.62
PFK1	YGR240C	ALR1	Q08269	859 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	AI2	P03876	854 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	LEU2	P04173	364 aa	Predicted RBP	4.93	□□□□□ -1.62
PFK1	YGR240C	HAP4	P14064	554 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	OTU2	P38747	307 aa	Known RBP	4.93	□□□□□ -1.62
PFK1	YGR240C	GPP1	P41277	250 aa	Known RBP	4.93	□□□□□ -1.62
PFK1	YGR240C	BNA1	P47096	177 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	ZDS2	P54786	942 aa		4.93	□□□□□ -1.62
PFK1	YGR240C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms