RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	YOL087C	Q99247	1116 aa		4.58	□□□□□ -1.68
SPI1	YER150W	CYC8	P14922	966 aa		4.57	□□□□□ -1.68
SPI1	YER150W	TPM1	P17536	199 aa	Known RBP	4.57	□□□□□ -1.68
SPI1	YER150W	GCD6	P32501	712 aa	Known RBP	4.57	□□□□□ -1.68
SPI1	YER150W	EXO84	P38261	753 aa		4.57	□□□□□ -1.68
SPI1	YER150W	RSC30	P38781	883 aa		4.57	□□□□□ -1.68
SPI1	YER150W	GGA2	P38817	585 aa	Known RBP	4.57	□□□□□ -1.68
SPI1	YER150W	RRP8	P38961	392 aa	Known RBP	4.57	□□□□□ -1.68
SPI1	YER150W	SPF1	P39986	1215 aa	Known RBP	4.57	□□□□□ -1.68
SPI1	YER150W	ESL1	P40456	1118 aa		4.57	□□□□□ -1.68
SPI1	YER150W	SPR3	P41901	512 aa		4.57	□□□□□ -1.68
SPI1	YER150W	BRE2	P43132	505 aa		4.57	□□□□□ -1.68
SPI1	YER150W	YGR122W	P53272	402 aa		4.57	□□□□□ -1.68
SPI1	YER150W	ALO1	P54783	526 aa	Known RBP	4.57	□□□□□ -1.68
SPI1	YER150W	TGL2	P54857	326 aa		4.57	□□□□□ -1.68
SPI1	YER150W	RSC2	Q06488	889 aa		4.57	□□□□□ -1.68
SPI1	YER150W	ATG13	Q06628	738 aa		4.57	□□□□□ -1.68
SPI1	YER150W	GPI13	Q07830	1017 aa		4.57	□□□□□ -1.68
SPI1	YER150W	APC5	Q08683	685 aa		4.57	□□□□□ -1.68
SPI1	YER150W	MCM16	Q12262	181 aa		4.57	□□□□□ -1.68
SPI1	YER150W	MED1	Q12321	566 aa		4.57	□□□□□ -1.68
SPI1	YER150W	SRF1	Q12516	437 aa		4.57	□□□□□ -1.68
SPI1	YER150W	LSO1	Q3E827	93 aa		4.57	□□□□□ -1.68
SPI1	YER150W	MPD2	Q99316	277 aa		4.57	□□□□□ -1.68
SPI1	YER150W	SAC3	P46674	1301 aa		4.56	□□□□□ -1.68
SPI1	YER150W	PRT1	P06103	763 aa	Known RBP	4.56	□□□□□ -1.68
SPI1	YER150W	ERR1	P0CX10	437 aa		4.56	□□□□□ -1.68
SPI1	YER150W	ERR2	P0CX11	437 aa		4.56	□□□□□ -1.68
SPI1	YER150W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SPI1	YER150W	ECM32	P32644	1121 aa	Known RBP	4.56	□□□□□ -1.68
SPI1	YER150W	VPS35	P34110	944 aa		4.56	□□□□□ -1.68
SPI1	YER150W	PXA2	P34230	853 aa		4.56	□□□□□ -1.68
SPI1	YER150W	MOT2	P34909	587 aa	Known RBP	4.56	□□□□□ -1.68
SPI1	YER150W	NUP120	P35729	1037 aa		4.56	□□□□□ -1.68
SPI1	YER150W	RKM3	P38222	552 aa		4.56	□□□□□ -1.68
SPI1	YER150W	MXR1	P40029	184 aa		4.56	□□□□□ -1.68
SPI1	YER150W	AIR1	P40507	360 aa	Known RBP	4.56	□□□□□ -1.68
SPI1	YER150W	MNT3	P40549	630 aa		4.56	□□□□□ -1.68
SPI1	YER150W	UBA2	P52488	636 aa		4.56	□□□□□ -1.68
SPI1	YER150W	TIM11	P81449	96 aa	Predicted RBP	4.56	□□□□□ -1.68
SPI1	YER150W	YML131W	Q03102	365 aa		4.56	□□□□□ -1.68
SPI1	YER150W	REH1	Q06709	432 aa		4.56	□□□□□ -1.68
SPI1	YER150W	YPL191C	Q08930	360 aa		4.56	□□□□□ -1.68
SPI1	YER150W	RRP6	Q12149	733 aa	Known RBP	4.56	□□□□□ -1.68
SPI1	YER150W	DBP10	Q12389	995 aa	Known RBP	4.56	□□□□□ -1.68
SPI1	YER150W	NUP145	P49687	1317 aa		4.55	□□□□□ -1.68
SPI1	YER150W	RPP1B	P10622	106 aa	Known RBP	4.55	□□□□□ -1.68
SPI1	YER150W	PRI2	P20457	528 aa		4.55	□□□□□ -1.68
SPI1	YER150W	PTP2	P29461	750 aa		4.55	□□□□□ -1.68
SPI1	YER150W	TPD3	P31383	635 aa		4.55	□□□□□ -1.68
SPI1	YER150W	IMP2'	P32351	346 aa		4.55	□□□□□ -1.68
SPI1	YER150W	VMA8	P32610	256 aa	Known RBP	4.55	□□□□□ -1.68
SPI1	YER150W	NOP4	P37838	685 aa	Known RBP	4.55	□□□□□ -1.68
SPI1	YER150W	YBR071W	P38243	211 aa		4.55	□□□□□ -1.68
SPI1	YER150W	RIM4	P38741	713 aa		4.55	□□□□□ -1.68
SPI1	YER150W	HAL5	P38970	855 aa	Known RBP	4.55	□□□□□ -1.68
SPI1	YER150W	TMA108	P40462	946 aa		4.55	□□□□□ -1.68
SPI1	YER150W	ROM1	P53046	1155 aa		4.55	□□□□□ -1.68
SPI1	YER150W	PEX14	P53112	341 aa		4.55	□□□□□ -1.68
SPI1	YER150W	ELA1	P53861	379 aa	Predicted RBP	4.55	□□□□□ -1.68
SPI1	YER150W	COG6	P53959	839 aa		4.55	□□□□□ -1.68
SPI1	YER150W	MET14	Q02196	202 aa		4.55	□□□□□ -1.68
SPI1	YER150W	TFB2	Q02939	513 aa		4.55	□□□□□ -1.68
SPI1	YER150W	UTP13	Q05946	817 aa	Known RBP	4.55	□□□□□ -1.68
SPI1	YER150W	SPN1	Q06505	410 aa	Predicted RBP	4.55	□□□□□ -1.68
SPI1	YER150W	YPR172W	Q06608	200 aa		4.55	□□□□□ -1.68
SPI1	YER150W	ISA1	Q07821	250 aa	Predicted RBP	4.55	□□□□□ -1.68
SPI1	YER150W	MDM38	Q08179	573 aa		4.55	□□□□□ -1.68
SPI1	YER150W	OPI10	Q08202	246 aa		4.55	□□□□□ -1.68
SPI1	YER150W	GAL1	P04385	528 aa		4.54	□□□□□ -1.68
SPI1	YER150W	CYT1	P07143	309 aa		4.54	□□□□□ -1.68
SPI1	YER150W	NPR1	P22211	790 aa		4.54	□□□□□ -1.68
SPI1	YER150W	CHS3	P29465	1165 aa		4.54	□□□□□ -1.68
SPI1	YER150W	HXT5	P38695	592 aa		4.54	□□□□□ -1.68
SPI1	YER150W	NPR3	P38742	1146 aa		4.54	□□□□□ -1.68
SPI1	YER150W	MVP1	P40959	511 aa	Known RBP	4.54	□□□□□ -1.68
SPI1	YER150W	FAA4	P47912	694 aa	Known RBP	4.54	□□□□□ -1.68
SPI1	YER150W	CLA4	P48562	842 aa		4.54	□□□□□ -1.68
SPI1	YER150W	ACS2	P52910	683 aa	Known RBP	4.54	□□□□□ -1.68
SPI1	YER150W	YGR125W	P53273	1036 aa		4.54	□□□□□ -1.68
SPI1	YER150W	YNL034W	P53963	612 aa		4.54	□□□□□ -1.68
SPI1	YER150W	YNL018C	P53976	612 aa		4.54	□□□□□ -1.68
SPI1	YER150W	GCR2	Q01722	534 aa		4.54	□□□□□ -1.68
SPI1	YER150W	SPO75	Q07798	868 aa		4.54	□□□□□ -1.68
SPI1	YER150W	CDC45	Q08032	650 aa		4.54	□□□□□ -1.68
SPI1	YER150W	OXR1	Q08952	273 aa		4.54	□□□□□ -1.68
SPI1	YER150W	YRR1	Q12172	810 aa		4.54	□□□□□ -1.68
SPI1	YER150W	MCM10	P32354	571 aa		4.53	□□□□□ -1.68
SPI1	YER150W	CCT3	P39077	534 aa	Known RBP	4.53	□□□□□ -1.68
SPI1	YER150W	MAM1	P40065	302 aa		4.53	□□□□□ -1.68
SPI1	YER150W	SEC9	P40357	651 aa		4.53	□□□□□ -1.68
SPI1	YER150W	BNA1	P47096	177 aa		4.53	□□□□□ -1.68
SPI1	YER150W	STR2	P47164	639 aa		4.53	□□□□□ -1.68
SPI1	YER150W	SGM1	P47166	707 aa		4.53	□□□□□ -1.68
SPI1	YER150W	PAP2	P53632	584 aa	Known RBP	4.53	□□□□□ -1.68
SPI1	YER150W	YNR063W	P53749	607 aa		4.53	□□□□□ -1.68
SPI1	YER150W	UME1	Q03010	460 aa		4.53	□□□□□ -1.68
SPI1	YER150W	UGO1	Q03327	502 aa		4.53	□□□□□ -1.68
SPI1	YER150W	GAS4	Q08271	471 aa		4.53	□□□□□ -1.68
SPI1	YER150W	NEW1	Q08972	1196 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms