RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	MEC3	Q02574	474 aa		5.02	□□□□□ -1.61
VMA8	YEL051W	GIC2	Q06648	383 aa		5.02	□□□□□ -1.61
VMA8	YEL051W	MED7	Q08278	222 aa		5.02	□□□□□ -1.61
VMA8	YEL051W	MET4	P32389	672 aa		5.01	□□□□□ -1.61
VMA8	YEL051W	VPS35	P34110	944 aa		5.01	□□□□□ -1.61
VMA8	YEL051W	MAC1	P35192	417 aa		5.01	□□□□□ -1.61
VMA8	YEL051W	MSB1	P21339	1137 aa	Known RBP	5	□□□□□ -1.61
VMA8	YEL051W	GCD6	P32501	712 aa	Known RBP	5	□□□□□ -1.61
VMA8	YEL051W	GPT2	P36148	743 aa		5	□□□□□ -1.61
VMA8	YEL051W	YKR073C	P36153	106 aa		5	□□□□□ -1.61
VMA8	YEL051W	DOT1	Q04089	582 aa	Known RBP	5	□□□□□ -1.61
VMA8	YEL051W	WHI5	Q12416	295 aa		5	□□□□□ -1.61
VMA8	YEL051W	SEC20	P28791	383 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	REI1	P38344	393 aa	Predicted RBP	4.99	□□□□□ -1.61
VMA8	YEL051W	THI12	P42883	340 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	THI5	P43534	340 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	DAK2	P43550	591 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	SPO74	P45819	413 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	THI11	P47183	340 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	THI13	Q07748	340 aa		4.99	□□□□□ -1.61
VMA8	YEL051W	YKL077W	P36081	392 aa		4.98	□□□□□ -1.61
VMA8	YEL051W	IPL1	P38991	367 aa		4.98	□□□□□ -1.61
VMA8	YEL051W	ALG6	Q12001	544 aa	Known RBP	4.98	□□□□□ -1.61
VMA8	YEL051W	CYC7	P00045	113 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-DR6	P0CX70	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-ER1	P0CX71	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-LR2	P0CX72	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-PL	P0CX73	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-JR1	P0CX74	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-LR3	P0CX75	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-ML2	P0CX76	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	PRP40	P33203	583 aa	Known RBP	4.97	□□□□□ -1.61
VMA8	YEL051W	ARL1	P38116	183 aa	Known RBP	4.97	□□□□□ -1.61
VMA8	YEL051W	TOS1	P38288	455 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	EXO5	P38289	585 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	SHU2	P38957	223 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	SEN54	Q02825	467 aa	Predicted RBP	4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-GR1	Q12085	440 aa		4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.97	□□□□□ -1.61
VMA8	YEL051W	TY1A-OL	Q92392	440 aa	Known RBP	4.97	□□□□□ -1.61
VMA8	YEL051W	KAR2	P16474	682 aa	Known RBP	4.96	□□□□□ -1.62
VMA8	YEL051W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
VMA8	YEL051W	SLD2	P34252	453 aa		4.96	□□□□□ -1.62
VMA8	YEL051W	NOG1	Q02892	647 aa	Known RBP	4.96	□□□□□ -1.62
VMA8	YEL051W	DAL4	Q04895	635 aa		4.96	□□□□□ -1.62
VMA8	YEL051W	OXR1	Q08952	273 aa		4.96	□□□□□ -1.62
VMA8	YEL051W	UGA4	P32837	571 aa		4.95	□□□□□ -1.62
VMA8	YEL051W	MMM1	P41800	426 aa		4.95	□□□□□ -1.62
VMA8	YEL051W	SLS1	P42900	643 aa		4.95	□□□□□ -1.62
VMA8	YEL051W	CTH1	P47976	325 aa		4.95	□□□□□ -1.62
VMA8	YEL051W	YGR045C	P53229	120 aa		4.95	□□□□□ -1.62
VMA8	YEL051W	TOS4	Q06266	489 aa		4.95	□□□□□ -1.62
VMA8	YEL051W	LIP5	P32875	414 aa		4.94	□□□□□ -1.62
VMA8	YEL051W	WHI3	P34761	661 aa	Known RBP	4.94	□□□□□ -1.62
VMA8	YEL051W	MSH4	P40965	878 aa	Predicted RBP	4.94	□□□□□ -1.62
VMA8	YEL051W	CIT3	P43635	486 aa		4.94	□□□□□ -1.62
VMA8	YEL051W	ULP1	Q02724	621 aa		4.94	□□□□□ -1.62
VMA8	YEL051W	BRE4	Q07660	1125 aa		4.94	□□□□□ -1.62
VMA8	YEL051W	AVO1	Q08236	1176 aa		4.94	□□□□□ -1.62
VMA8	YEL051W	RPS4A	P0CX35	261 aa	Known RBP	4.93	□□□□□ -1.62
VMA8	YEL051W	RPS4B	P0CX36	261 aa	Known RBP	4.93	□□□□□ -1.62
VMA8	YEL051W	MSH3	P25336	1018 aa		4.93	□□□□□ -1.62
VMA8	YEL051W	RPT1	P33299	467 aa	Known RBP	4.93	□□□□□ -1.62
VMA8	YEL051W	ELA1	P53861	379 aa	Predicted RBP	4.93	□□□□□ -1.62
VMA8	YEL051W	PEX13	P80667	386 aa		4.93	□□□□□ -1.62
VMA8	YEL051W	MAG2	Q06436	670 aa	Known RBP	4.93	□□□□□ -1.62
VMA8	YEL051W	YOR059C	Q08448	450 aa	Known RBP	4.93	□□□□□ -1.62
VMA8	YEL051W	NEM1	P38757	446 aa		4.92	□□□□□ -1.62
VMA8	YEL051W	IRC24	P40580	263 aa		4.92	□□□□□ -1.62
VMA8	YEL051W	MTR4	P47047	1073 aa	Known RBP	4.92	□□□□□ -1.62
VMA8	YEL051W	RSM26	P47141	266 aa		4.92	□□□□□ -1.62
VMA8	YEL051W	ALT1	P52893	592 aa		4.92	□□□□□ -1.62
VMA8	YEL051W	RCM1	P53972	490 aa		4.92	□□□□□ -1.62
VMA8	YEL051W	YML020W	Q03722	664 aa		4.92	□□□□□ -1.62
VMA8	YEL051W	GCD1	P09032	578 aa	Predicted RBP	4.91	□□□□□ -1.62
VMA8	YEL051W	NFS1	P25374	497 aa		4.91	□□□□□ -1.62
VMA8	YEL051W	SMY2	P32909	740 aa	Known RBP	4.91	□□□□□ -1.62
VMA8	YEL051W	SQT1	P35184	431 aa		4.91	□□□□□ -1.62
VMA8	YEL051W	NNK1	P36003	928 aa		4.91	□□□□□ -1.62
VMA8	YEL051W	ADI1	Q03677	179 aa		4.91	□□□□□ -1.62
VMA8	YEL051W	UTP5	Q04177	643 aa	Known RBP	4.91	□□□□□ -1.62
VMA8	YEL051W	VMA4	P22203	233 aa	Known RBP	4.9	□□□□□ -1.63
VMA8	YEL051W	PEX28	P38848	579 aa		4.9	□□□□□ -1.63
VMA8	YEL051W	FAA3	P39002	694 aa		4.9	□□□□□ -1.63
VMA8	YEL051W	SDH1	Q00711	640 aa		4.9	□□□□□ -1.63
VMA8	YEL051W	YPL109C	Q02981	657 aa		4.9	□□□□□ -1.63
VMA8	YEL051W	EAR1	Q03212	550 aa		4.9	□□□□□ -1.63
VMA8	YEL051W	NSI1	Q12457	570 aa		4.9	□□□□□ -1.63
VMA8	YEL051W	HXK1	P04806	485 aa	Known RBP	4.89	□□□□□ -1.63
VMA8	YEL051W	YAR028W	P39548	234 aa		4.89	□□□□□ -1.63
VMA8	YEL051W	NOP8	Q08287	484 aa	Predicted RBP	4.89	□□□□□ -1.63
VMA8	YEL051W	RDH54	P38086	958 aa		4.88	□□□□□ -1.63
VMA8	YEL051W	OYE3	P41816	400 aa	Predicted RBP	4.88	□□□□□ -1.63
VMA8	YEL051W	XKS1	P42826	600 aa		4.88	□□□□□ -1.63
VMA8	YEL051W	YGL140C	P53120	1219 aa		4.88	□□□□□ -1.63
VMA8	YEL051W	YVC1	Q12324	675 aa		4.88	□□□□□ -1.63
VMA8	YEL051W	RET1	P22276	1149 aa	Known RBP	4.87	□□□□□ -1.63
VMA8	YEL051W	SEA4	P38164	1038 aa		4.87	□□□□□ -1.63
VMA8	YEL051W	POL32	P47110	350 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms