RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C ERS1P17261 260 aa2.21□□□□□ -2.06
UFD2YDL190C YKR073CP36153 106 aa2.21□□□□□ -2.06
UFD2YDL190C ATG1P53104 897 aa2.21□□□□□ -2.06
UFD2YDL190C UFD2P54860 961 aa2.21□□□□□ -2.06
UFD2YDL190C YHL008CP38750 627 aa2.21□□□□□ -2.06
UFD2YDL190C NCE103P53615 221 aa2.21□□□□□ -2.06
UFD2YDL190C PPX1P38698 397 aa2.2□□□□□ -2.06
UFD2YDL190C THI12P42883 340 aa2.2□□□□□ -2.06
UFD2YDL190C THI5P43534 340 aa2.2□□□□□ -2.06
UFD2YDL190C POL32P47110 350 aa2.2□□□□□ -2.06
UFD2YDL190C THI11P47183 340 aa2.2□□□□□ -2.06
UFD2YDL190C GIC2Q06648 383 aa2.2□□□□□ -2.06
UFD2YDL190C THI13Q07748 340 aa2.2□□□□□ -2.06
UFD2YDL190C MSB1P21339 1137 aaKnown RBP2.2□□□□□ -2.06
UFD2YDL190C RRP15Q06511 250 aaPredicted RBP2.2□□□□□ -2.06
UFD2YDL190C ATE1P16639 503 aa2.2□□□□□ -2.06
UFD2YDL190C SPO74P45819 413 aa2.2□□□□□ -2.06
UFD2YDL190C AVT1P47082 602 aa2.2□□□□□ -2.06
UFD2YDL190C ACF4P47129 309 aa2.2□□□□□ -2.06
UFD2YDL190C TRS120Q04183 1289 aa2.2□□□□□ -2.06
UFD2YDL190C NUT2Q06213 157 aa2.2□□□□□ -2.06
UFD2YDL190C WHI5Q12416 295 aa2.2□□□□□ -2.06
UFD2YDL190C HSL1P34244 1518 aa2.2□□□□□ -2.06
UFD2YDL190C YNL011CP53980 444 aa2.19□□□□□ -2.06
UFD2YDL190C BRE4Q07660 1125 aa2.19□□□□□ -2.06
UFD2YDL190C YOR223WQ12015 292 aa2.19□□□□□ -2.06
UFD2YDL190C YLL054CQ12244 843 aa2.19□□□□□ -2.06
UFD2YDL190C NSI1Q12457 570 aa2.19□□□□□ -2.06
UFD2YDL190C PUB1P32588 453 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
UFD2YDL190C GPT2P36148 743 aa2.19□□□□□ -2.06
UFD2YDL190C CTR9P89105 1077 aa2.19□□□□□ -2.06
UFD2YDL190C RSC4Q02206 625 aa2.19□□□□□ -2.06
UFD2YDL190C FRT1Q99332 602 aa2.19□□□□□ -2.06
UFD2YDL190C NPR1P22211 790 aa2.18□□□□□ -2.06
UFD2YDL190C WHI3P34761 661 aaKnown RBP2.18□□□□□ -2.06
UFD2YDL190C SDH1Q00711 640 aa2.18□□□□□ -2.06
UFD2YDL190C DOT1Q04089 582 aaKnown RBP2.18□□□□□ -2.06
UFD2YDL190C BSC2Q05611 235 aa2.18□□□□□ -2.06
UFD2YDL190C HVG1P0CE11 249 aa2.18□□□□□ -2.06
UFD2YDL190C IRC24P40580 263 aa2.18□□□□□ -2.06
UFD2YDL190C MMM1P41800 426 aa2.18□□□□□ -2.06
UFD2YDL190C CTH1P47976 325 aa2.18□□□□□ -2.06
UFD2YDL190C ALG6Q12001 544 aaKnown RBP2.18□□□□□ -2.06
UFD2YDL190C RPO31P04051 1460 aa2.18□□□□□ -2.06
UFD2YDL190C GEA2P39993 1459 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C COBP00163 385 aa2.17□□□□□ -2.06
UFD2YDL190C MCM5P29496 775 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C SEC8P32855 1065 aa2.17□□□□□ -2.06
UFD2YDL190C MON1P53129 644 aa2.17□□□□□ -2.06
UFD2YDL190C OYE2Q03558 400 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C INP54Q08227 384 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C DNF2Q12675 1612 aa2.17□□□□□ -2.06
UFD2YDL190C HTS1P07263 546 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C MET4P32389 672 aa2.17□□□□□ -2.06
UFD2YDL190C DUR3P33413 735 aa2.17□□□□□ -2.06
UFD2YDL190C MGE1P38523 228 aa2.17□□□□□ -2.06
UFD2YDL190C UTP22P53254 1237 aaPredicted RBP2.17□□□□□ -2.06
UFD2YDL190C CDC55Q00362 526 aa2.17□□□□□ -2.06
UFD2YDL190C MAG2Q06436 670 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C CMR1Q12510 522 aaKnown RBP2.17□□□□□ -2.06
UFD2YDL190C FLP1P03870 423 aa2.16□□□□□ -2.06
UFD2YDL190C REI1P38344 393 aaPredicted RBP2.16□□□□□ -2.06
UFD2YDL190C NOC3Q07896 663 aaPredicted RBP2.16□□□□□ -2.06
UFD2YDL190C AVO1Q08236 1176 aa2.16□□□□□ -2.06
UFD2YDL190C SPT6P23615 1451 aaKnown RBP2.16□□□□□ -2.06
UFD2YDL190C RKR1Q04781 1562 aa2.16□□□□□ -2.06
UFD2YDL190C RIM11P38615 370 aa2.16□□□□□ -2.06
UFD2YDL190C CIT3P43635 486 aa2.16□□□□□ -2.06
UFD2YDL190C YJR107WP47145 328 aa2.16□□□□□ -2.06
UFD2YDL190C GCV1P48015 400 aa2.16□□□□□ -2.06
UFD2YDL190C RCM1P53972 490 aa2.16□□□□□ -2.06
UFD2YDL190C MEC3Q02574 474 aa2.16□□□□□ -2.06
UFD2YDL190C SVF1Q05515 481 aa2.16□□□□□ -2.06
UFD2YDL190C PMT7Q06644 662 aa2.16□□□□□ -2.06
UFD2YDL190C GCD1P09032 578 aaPredicted RBP2.16□□□□□ -2.06
UFD2YDL190C YKL077WP36081 392 aa2.16□□□□□ -2.06
UFD2YDL190C NUT1P53114 1132 aa2.16□□□□□ -2.06
UFD2YDL190C YIG1Q08956 461 aa2.16□□□□□ -2.06
UFD2YDL190C MNL2Q12205 849 aa2.16□□□□□ -2.06
UFD2YDL190C ECM5Q03214 1411 aa2.15□□□□□ -2.06
UFD2YDL190C ATG2P53855 1592 aa2.15□□□□□ -2.06
UFD2YDL190C NTE1Q04958 1679 aa2.15□□□□□ -2.06
UFD2YDL190C GLT1Q12680 2145 aaKnown RBP2.15□□□□□ -2.06
UFD2YDL190C RPS4AP0CX35 261 aaKnown RBP2.15□□□□□ -2.07
UFD2YDL190C RPS4BP0CX36 261 aaKnown RBP2.15□□□□□ -2.07
UFD2YDL190C POL12P38121 705 aaPredicted RBP2.15□□□□□ -2.07
UFD2YDL190C SAM37P50110 327 aa2.15□□□□□ -2.07
UFD2YDL190C ELA1P53861 379 aaPredicted RBP2.15□□□□□ -2.07
UFD2YDL190C JIP5Q06214 492 aaPredicted RBP2.15□□□□□ -2.07
UFD2YDL190C GPI13Q07830 1017 aa2.15□□□□□ -2.07
UFD2YDL190C YTA7P40340 1379 aa2.15□□□□□ -2.07
UFD2YDL190C RVS167P39743 482 aaKnown RBP2.15□□□□□ -2.07
UFD2YDL190C FYV10P40492 516 aa2.15□□□□□ -2.07
UFD2YDL190C YAF9P53930 226 aa2.15□□□□□ -2.07
UFD2YDL190C MSH6Q03834 1242 aa2.15□□□□□ -2.07
UFD2YDL190C SGS1P35187 1447 aa2.14□□□□□ -2.07
UFD2YDL190C ATG14P38270 344 aa2.14□□□□□ -2.07
UFD2YDL190C YOR059CQ08448 450 aaKnown RBP2.14□□□□□ -2.07
UFD2YDL190C PHO4P07270 312 aaKnown RBP2.14□□□□□ -2.07
UFD2YDL190C PRP5P21372 849 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms