RNA–Protein interactions for RNA: YCL059C

KRR1, Transcript of Nucleolar protein required for rRNA synthesis and ribosomal assembly, yeastyeast

Gene KRR1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRR1YCL059C PET111P08468 800 aa9.46□□□□□ -0.9
KRR1YCL059C BMH1P29311 267 aaKnown RBP9.46□□□□□ -0.9
KRR1YCL059C NDC80P40460 691 aa9.46□□□□□ -0.9
KRR1YCL059C PRP31P49704 494 aaPredicted RBP9.46□□□□□ -0.9
KRR1YCL059C YDR341CQ05506 607 aaKnown RBP9.46□□□□□ -0.9
KRR1YCL059C YPL260WQ08977 551 aa9.46□□□□□ -0.9
KRR1YCL059C BDF1P35817 686 aa9.45□□□□□ -0.9
KRR1YCL059C RXT2P38255 430 aa9.45□□□□□ -0.9
KRR1YCL059C YFH7P43591 353 aa9.45□□□□□ -0.9
KRR1YCL059C CUE3P53137 624 aaKnown RBP9.45□□□□□ -0.9
KRR1YCL059C RPT4P53549 437 aaKnown RBP9.45□□□□□ -0.9
KRR1YCL059C RBA50Q04418 439 aa9.45□□□□□ -0.9
KRR1YCL059C MMR1Q06324 491 aa9.45□□□□□ -0.9
KRR1YCL059C TLG2Q08144 397 aa9.45□□□□□ -0.9
KRR1YCL059C YOR296WQ08748 1289 aa9.45□□□□□ -0.9
KRR1YCL059C DCS2Q12123 353 aa9.45□□□□□ -0.9
KRR1YCL059C CIT1P00890 479 aa9.44□□□□□ -0.9
KRR1YCL059C CHO2P05374 869 aaKnown RBP9.44□□□□□ -0.9
KRR1YCL059C RIT1P23796 513 aa9.44□□□□□ -0.9
KRR1YCL059C RRP43P25359 394 aaPredicted RBP9.44□□□□□ -0.9
KRR1YCL059C MCM4P30665 933 aaKnown RBP9.44□□□□□ -0.9
KRR1YCL059C RPT3P33298 428 aaKnown RBP9.44□□□□□ -0.9
KRR1YCL059C VPS8P39702 1274 aa9.44□□□□□ -0.9
KRR1YCL059C VPS38Q05919 439 aa9.44□□□□□ -0.9
KRR1YCL059C PSR2Q07949 397 aa9.44□□□□□ -0.9
KRR1YCL059C AFT2Q08957 416 aa9.44□□□□□ -0.9
KRR1YCL059C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
KRR1YCL059C CDC6P09119 513 aa9.43□□□□□ -0.9
KRR1YCL059C RNR3P21672 869 aaKnown RBP9.43□□□□□ -0.9
KRR1YCL059C MAK31P23059 88 aa9.43□□□□□ -0.9
KRR1YCL059C SPB4P25808 606 aaPredicted RBP9.43□□□□□ -0.9
KRR1YCL059C TIF4632P39936 914 aaKnown RBP9.43□□□□□ -0.9
KRR1YCL059C PCI8P40512 444 aa9.43□□□□□ -0.9
KRR1YCL059C IRC4Q03036 179 aa9.43□□□□□ -0.9
KRR1YCL059C COG4Q06096 861 aa9.43□□□□□ -0.9
KRR1YCL059C CLF1Q12309 687 aaPredicted RBP9.43□□□□□ -0.9
KRR1YCL059C YOL098CQ12496 1037 aa9.43□□□□□ -0.9
KRR1YCL059C URA1P28272 314 aaPredicted RBP9.42□□□□□ -0.9
KRR1YCL059C SAS3P34218 831 aa9.42□□□□□ -0.9
KRR1YCL059C CSM3Q04659 317 aa9.42□□□□□ -0.9
KRR1YCL059C ATG9Q12142 997 aa9.42□□□□□ -0.9
KRR1YCL059C YRF1-3P0CX14 1859 aa9.41□□□□□ -0.9
KRR1YCL059C YRF1-7P0CX15 1859 aa9.41□□□□□ -0.9
KRR1YCL059C YRF1-6P53819 1859 aa9.41□□□□□ -0.9
KRR1YCL059C HIS4P00815 799 aaKnown RBP9.41□□□□□ -0.9
KRR1YCL059C RPL8BP29453 256 aaKnown RBP9.41□□□□□ -0.9
KRR1YCL059C EFM2P38347 419 aa9.41□□□□□ -0.9
KRR1YCL059C CTM1P38818 585 aa9.41□□□□□ -0.9
KRR1YCL059C VID27P40157 782 aa9.41□□□□□ -0.9
KRR1YCL059C SDA1P53313 767 aaKnown RBP9.41□□□□□ -0.9
KRR1YCL059C GIS4Q04233 774 aa9.41□□□□□ -0.9
KRR1YCL059C YLR287CQ05881 355 aa9.41□□□□□ -0.9
KRR1YCL059C TMA16Q08687 178 aa9.41□□□□□ -0.9
KRR1YCL059C APL4Q12028 832 aa9.41□□□□□ -0.9
KRR1YCL059C NOP14Q99207 810 aaKnown RBP9.41□□□□□ -0.9
KRR1YCL059C YOR111WQ99210 232 aa9.41□□□□□ -0.9
KRR1YCL059C RAD61Q99359 647 aa9.41□□□□□ -0.9
KRR1YCL059C MET6P05694 767 aaKnown RBP9.4□□□□□ -0.9
KRR1YCL059C VPS1P21576 704 aaKnown RBP9.4□□□□□ -0.9
KRR1YCL059C MCM3P24279 971 aaKnown RBP9.4□□□□□ -0.9
KRR1YCL059C KRE2P27809 442 aa9.4□□□□□ -0.9
KRR1YCL059C SEC65P29478 273 aa9.4□□□□□ -0.9
KRR1YCL059C REI1P38344 393 aaPredicted RBP9.4□□□□□ -0.9
KRR1YCL059C NPR2P39923 615 aa9.4□□□□□ -0.9
KRR1YCL059C ALD2P47771 506 aa9.4□□□□□ -0.9
KRR1YCL059C RPT6Q01939 405 aaKnown RBP9.4□□□□□ -0.9
KRR1YCL059C SMD2Q06217 110 aaKnown RBP9.4□□□□□ -0.9
KRR1YCL059C RRP6Q12149 733 aaKnown RBP9.4□□□□□ -0.9
KRR1YCL059C TFC8Q12308 588 aa9.4□□□□□ -0.9
KRR1YCL059C TUF1P02992 437 aaKnown RBP9.39□□□□□ -0.91
KRR1YCL059C THR4P16120 514 aaKnown RBP9.39□□□□□ -0.91
KRR1YCL059C PHO13P19881 312 aa9.39□□□□□ -0.91
KRR1YCL059C SIT4P20604 311 aa9.39□□□□□ -0.91
KRR1YCL059C SEC20P28791 383 aa9.39□□□□□ -0.91
KRR1YCL059C YEL043WP32618 956 aa9.39□□□□□ -0.91
KRR1YCL059C RRP1P35178 278 aaPredicted RBP9.39□□□□□ -0.91
KRR1YCL059C MYO3P36006 1272 aa9.39□□□□□ -0.91
KRR1YCL059C PCH2P38126 564 aa9.39□□□□□ -0.91
KRR1YCL059C PSY4P38193 441 aa9.39□□□□□ -0.91
KRR1YCL059C APL6P46682 809 aa9.39□□□□□ -0.91
KRR1YCL059C SMC3P47037 1230 aa9.39□□□□□ -0.91
KRR1YCL059C ALF1P53904 254 aa9.39□□□□□ -0.91
KRR1YCL059C UTP5Q04177 643 aaKnown RBP9.39□□□□□ -0.91
KRR1YCL059C YMR074CQ04773 145 aa9.39□□□□□ -0.91
KRR1YCL059C TOS4Q06266 489 aa9.39□□□□□ -0.91
KRR1YCL059C SPP382Q06411 708 aaPredicted RBP9.39□□□□□ -0.91
KRR1YCL059C OPY2Q06810 360 aa9.39□□□□□ -0.91
KRR1YCL059C DUR1,2P32528 1835 aaKnown RBP9.38□□□□□ -0.91
KRR1YCL059C CAF20P12962 161 aaKnown RBP9.38□□□□□ -0.91
KRR1YCL059C DPB3P27344 201 aa9.38□□□□□ -0.91
KRR1YCL059C SRB4P32569 687 aa9.38□□□□□ -0.91
KRR1YCL059C CIN4P39110 191 aa9.38□□□□□ -0.91
KRR1YCL059C CSM2P40465 213 aa9.38□□□□□ -0.91
KRR1YCL059C OM45P16547 393 aa9.37□□□□□ -0.91
KRR1YCL059C ALG1P16661 449 aa9.37□□□□□ -0.91
KRR1YCL059C UBC1P21734 215 aaKnown RBP9.37□□□□□ -0.91
KRR1YCL059C LCB1P25045 558 aaKnown RBP9.37□□□□□ -0.91
KRR1YCL059C PWP2P25635 923 aaKnown RBP9.37□□□□□ -0.91
KRR1YCL059C DEP1P31385 405 aa9.37□□□□□ -0.91
KRR1YCL059C YET1P35723 206 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms