RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W FRT1Q99332 602 aa5.76□□□□□ -1.49
SIF2YBR103W TRS33Q99394 268 aa5.76□□□□□ -1.49
SIF2YBR103W FIG4P42837 879 aa5.75□□□□□ -1.49
SIF2YBR103W VPS4P52917 437 aa5.75□□□□□ -1.49
SIF2YBR103W CTR9P89105 1077 aa5.75□□□□□ -1.49
SIF2YBR103W PRP3Q03338 469 aaPredicted RBP5.75□□□□□ -1.49
SIF2YBR103W PEX29Q03370 554 aa5.75□□□□□ -1.49
SIF2YBR103W CDC45Q08032 650 aa5.75□□□□□ -1.49
SIF2YBR103W TRP5P00931 707 aaKnown RBP5.74□□□□□ -1.49
SIF2YBR103W TOP1P04786 769 aa5.74□□□□□ -1.49
SIF2YBR103W MRP7P12687 371 aa5.74□□□□□ -1.49
SIF2YBR103W LTV1P34078 463 aa5.74□□□□□ -1.49
SIF2YBR103W MID1P41821 548 aa5.74□□□□□ -1.49
SIF2YBR103W TAN1P53072 289 aaPredicted RBP5.74□□□□□ -1.49
SIF2YBR103W MAG2Q06436 670 aaKnown RBP5.74□□□□□ -1.49
SIF2YBR103W ALR1Q08269 859 aa5.74□□□□□ -1.49
SIF2YBR103W WSC3Q12215 556 aa5.74□□□□□ -1.49
SIF2YBR103W GRX6Q12438 231 aa5.74□□□□□ -1.49
SIF2YBR103W FAS2P19097 1887 aaKnown RBP5.74□□□□□ -1.49
SIF2YBR103W SAC3P46674 1301 aa5.74□□□□□ -1.49
SIF2YBR103W MET4P32389 672 aa5.74□□□□□ -1.49
SIF2YBR103W SHC1P39000 512 aa5.74□□□□□ -1.49
SIF2YBR103W APL6P46682 809 aa5.74□□□□□ -1.49
SIF2YBR103W SQS1P53866 767 aaKnown RBP5.74□□□□□ -1.49
SIF2YBR103W YPR084WQ06821 456 aa5.74□□□□□ -1.49
SIF2YBR103W YKU70P32807 602 aa5.73□□□□□ -1.49
SIF2YBR103W SLN1P39928 1220 aaPredicted RBP5.73□□□□□ -1.49
SIF2YBR103W DSN1P40568 576 aa5.73□□□□□ -1.49
SIF2YBR103W YFL034WP43564 1073 aa5.73□□□□□ -1.49
SIF2YBR103W TUB4P53378 473 aa5.73□□□□□ -1.49
SIF2YBR103W PML39Q03760 334 aa5.73□□□□□ -1.49
SIF2YBR103W CAF20P12962 161 aaKnown RBP5.72□□□□□ -1.49
SIF2YBR103W ICL1P28240 557 aaPredicted RBP5.72□□□□□ -1.49
SIF2YBR103W NUP133P36161 1157 aa5.72□□□□□ -1.49
SIF2YBR103W YIR014WP40570 242 aa5.72□□□□□ -1.49
SIF2YBR103W SPR3P41901 512 aa5.72□□□□□ -1.49
SIF2YBR103W RNH70P53331 553 aa5.72□□□□□ -1.49
SIF2YBR103W NMA111P53920 997 aa5.72□□□□□ -1.49
SIF2YBR103W PKH1Q03407 766 aa5.72□□□□□ -1.49
SIF2YBR103W MTC5Q03897 1148 aa5.72□□□□□ -1.49
SIF2YBR103W YPR097WQ06839 1073 aa5.72□□□□□ -1.49
SIF2YBR103W ATG20Q07528 640 aa5.72□□□□□ -1.49
SIF2YBR103W NOT3P06102 836 aaKnown RBP5.71□□□□□ -1.5
SIF2YBR103W FRD1P32614 470 aaKnown RBP5.71□□□□□ -1.5
SIF2YBR103W PPG1P32838 368 aa5.71□□□□□ -1.5
SIF2YBR103W VAC8P39968 578 aa5.71□□□□□ -1.5
SIF2YBR103W MAD1P40957 749 aa5.71□□□□□ -1.5
SIF2YBR103W ITC1P53125 1264 aa5.71□□□□□ -1.5
SIF2YBR103W FCP1Q03254 732 aa5.71□□□□□ -1.5
SIF2YBR103W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SIF2YBR103W SAS4Q04003 481 aa5.71□□□□□ -1.5
SIF2YBR103W YSH1Q06224 779 aaPredicted RBP5.71□□□□□ -1.5
SIF2YBR103W MNL2Q12205 849 aa5.71□□□□□ -1.5
SIF2YBR103W RAM1P22007 431 aa5.7□□□□□ -1.5
SIF2YBR103W MSH3P25336 1018 aa5.7□□□□□ -1.5
SIF2YBR103W SRP40P32583 406 aaPredicted RBP5.7□□□□□ -1.5
SIF2YBR103W FYV10P40492 516 aa5.7□□□□□ -1.5
SIF2YBR103W OSW7P43611 510 aa5.7□□□□□ -1.5
SIF2YBR103W AGE1Q04412 482 aa5.7□□□□□ -1.5
SIF2YBR103W ETT1Q08421 412 aaKnown RBP5.7□□□□□ -1.5
SIF2YBR103W DPH6Q12429 685 aa5.7□□□□□ -1.5
SIF2YBR103W RVB2Q12464 471 aaKnown RBP5.7□□□□□ -1.5
SIF2YBR103W FIG2P25653 1609 aa5.7□□□□□ -1.5
SIF2YBR103W RPS19AP07280 144 aaKnown RBP5.7□□□□□ -1.5
SIF2YBR103W RPS19BP07281 144 aaPredicted RBP5.7□□□□□ -1.5
SIF2YBR103W RET1P22276 1149 aaKnown RBP5.7□□□□□ -1.5
SIF2YBR103W RRP14P36080 434 aaKnown RBP5.7□□□□□ -1.5
SIF2YBR103W AIM9P40053 627 aaKnown RBP5.7□□□□□ -1.5
SIF2YBR103W UBX2Q04228 584 aa5.7□□□□□ -1.5
SIF2YBR103W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SIF2YBR103W LSO1Q3E827 93 aa5.7□□□□□ -1.5
SIF2YBR103W DUR1,2P32528 1835 aaKnown RBP5.69□□□□□ -1.5
SIF2YBR103W MIP1P15801 1254 aa5.69□□□□□ -1.5
SIF2YBR103W GCD11P32481 527 aaKnown RBP5.69□□□□□ -1.5
SIF2YBR103W RAD24P32641 659 aa5.69□□□□□ -1.5
SIF2YBR103W SWE1P32944 819 aa5.69□□□□□ -1.5
SIF2YBR103W UBP12P39538 1254 aa5.69□□□□□ -1.5
SIF2YBR103W ICP55P40051 511 aa5.69□□□□□ -1.5
SIF2YBR103W YGR122WP53272 402 aa5.69□□□□□ -1.5
SIF2YBR103W ALD6P54115 500 aaKnown RBP5.69□□□□□ -1.5
SIF2YBR103W GRX3Q03835 250 aa5.69□□□□□ -1.5
SIF2YBR103W TRS120Q04183 1289 aa5.69□□□□□ -1.5
SIF2YBR103W YLR278CQ05854 1341 aa5.69□□□□□ -1.5
SIF2YBR103W CLN2P20438 545 aa5.68□□□□□ -1.5
SIF2YBR103W KRE2P27809 442 aa5.68□□□□□ -1.5
SIF2YBR103W RPT1P33299 467 aaKnown RBP5.68□□□□□ -1.5
SIF2YBR103W BYE1P36106 594 aa5.68□□□□□ -1.5
SIF2YBR103W BOI2P39969 1040 aa5.68□□□□□ -1.5
SIF2YBR103W STR2P47164 639 aa5.68□□□□□ -1.5
SIF2YBR103W ISM1P48526 1002 aa5.68□□□□□ -1.5
SIF2YBR103W PUS5Q06244 254 aa5.68□□□□□ -1.5
SIF2YBR103W SUP35P05453 685 aaKnown RBP5.67□□□□□ -1.5
SIF2YBR103W PDR1P12383 1068 aa5.67□□□□□ -1.5
SIF2YBR103W YKL091CP33324 310 aaKnown RBP5.67□□□□□ -1.5
SIF2YBR103W VPS24P36095 224 aaKnown RBP5.67□□□□□ -1.5
SIF2YBR103W YIL092WP40497 633 aa5.67□□□□□ -1.5
SIF2YBR103W KXD1P53158 218 aa5.67□□□□□ -1.5
SIF2YBR103W ISR1Q06098 443 aaKnown RBP5.67□□□□□ -1.5
SIF2YBR103W RPN7Q06103 429 aaKnown RBP5.67□□□□□ -1.5
SIF2YBR103W PDC1P06169 563 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms