RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
CPSF7-218ENST00000537641 PNPLA6Q8IY17 1366 aa15.23■□□□□ 0.03
CPSF7-218ENST00000537641 CPS1P31327 1500 aa15.23■□□□□ 0.03
CPSF7-218ENST00000537641 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
CPSF7-218ENST00000537641 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
CPSF7-218ENST00000537641 PTCH1Q13635 1447 aa15.22■□□□□ 0.03
CPSF7-218ENST00000537641 TNRQ92752 1358 aa15.22■□□□□ 0.03
CPSF7-218ENST00000537641 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
CPSF7-218ENST00000537641 HDGFP51858 240 aaKnown RBP15.22■□□□□ 0.03
CPSF7-218ENST00000537641 BMP2KLQ5H9B9 411 aa15.22■□□□□ 0.03
CPSF7-218ENST00000537641 TECPR2O15040 1411 aa15.22■□□□□ 0.03
CPSF7-218ENST00000537641 FAM135BQ49AJ0 1406 aa15.22■□□□□ 0.03
CPSF7-218ENST00000537641 CABP1Q9NZU7 370 aa15.21■□□□□ 0.03
CPSF7-218ENST00000537641 CHD1LQ86WJ1 897 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 GBP4Q96PP9 640 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 RIPK4P57078 832 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 SKOR2Q2VWA4 1001 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-218ENST00000537641 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 SIRT1Q96EB6 747 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
CPSF7-218ENST00000537641 METP08581 1390 aa15.19■□□□□ 0.02
CPSF7-218ENST00000537641 MON2Q7Z3U7 1717 aa15.19■□□□□ 0.02
CPSF7-218ENST00000537641 DIAPH1O60610 1272 aaKnown RBP15.19■□□□□ 0.02
CPSF7-218ENST00000537641 ITSN1Q15811 1721 aa15.19■□□□□ 0.02
CPSF7-218ENST00000537641 AKAP12Q02952 1782 aa15.18■□□□□ 0.02
CPSF7-218ENST00000537641 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
CPSF7-218ENST00000537641 PANK2Q9BZ23 570 aa15.18■□□□□ 0.02
CPSF7-218ENST00000537641 GZF1Q9H116 711 aaPredicted RBP15.18■□□□□ 0.02
CPSF7-218ENST00000537641 MAP2P11137 1827 aaKnown RBP15.18■□□□□ 0.02
CPSF7-218ENST00000537641 CPSF1Q10570 1443 aaKnown RBP15.18■□□□□ 0.02
CPSF7-218ENST00000537641 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
CPSF7-218ENST00000537641 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
CPSF7-218ENST00000537641 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
CPSF7-218ENST00000537641 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
CPSF7-218ENST00000537641 WASLO00401 505 aaPredicted RBP15.17■□□□□ 0.02
CPSF7-218ENST00000537641 FCHSD2O94868 740 aa15.16■□□□□ 0.02
CPSF7-218ENST00000537641 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
CPSF7-218ENST00000537641 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
CPSF7-218ENST00000537641 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
CPSF7-218ENST00000537641 LNPKQ9C0E8 428 aa15.16■□□□□ 0.02
CPSF7-218ENST00000537641 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
CPSF7-218ENST00000537641 K7ELQ4 463 aaPredicted RBP15.14■□□□□ 0.01
CPSF7-218ENST00000537641 ARXQ96QS3 562 aa15.14■□□□□ 0.01
CPSF7-218ENST00000537641 C3P01024 1663 aa15.13■□□□□ 0.01
CPSF7-218ENST00000537641 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
CPSF7-218ENST00000537641 KIF2CQ99661 725 aa15.13■□□□□ 0.01
CPSF7-218ENST00000537641 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
CPSF7-218ENST00000537641 ZBTB7BO15156 539 aaPredicted RBP15.12■□□□□ 0.01
CPSF7-218ENST00000537641 TXNDC2Q86VQ3 553 aa15.12■□□□□ 0.01
CPSF7-218ENST00000537641 ABCC4O15439 1325 aa15.12■□□□□ 0.01
CPSF7-218ENST00000537641 PLEKHG1Q9ULL1 1385 aa15.12■□□□□ 0.01
CPSF7-218ENST00000537641 ADAMTS13Q76LX8 1427 aa15.12■□□□□ 0.01
CPSF7-218ENST00000537641 TOPAZ1Q8N9V7 1692 aa15.12■□□□□ 0.01
CPSF7-218ENST00000537641 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
CPSF7-218ENST00000537641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.12■□□□□ 0.01
CPSF7-218ENST00000537641 CDK12Q9NYV4 1490 aaPredicted RBP15.11■□□□□ 0.01
CPSF7-218ENST00000537641 ESPNB1AK53 854 aa15.11■□□□□ 0.01
CPSF7-218ENST00000537641 NFE2L2Q16236 605 aa15.11■□□□□ 0.01
CPSF7-218ENST00000537641 NAP1L5Q96NT1 182 aaPredicted RBP15.11■□□□□ 0.01
CPSF7-218ENST00000537641 ANKRD45Q5TZF3 282 aa15.1■□□□□ 0.01
CPSF7-218ENST00000537641 NUDT16Q96DE0 195 aaKnown RBP15.1■□□□□ 0.01
CPSF7-218ENST00000537641 IFT57Q9NWB7 429 aa15.1■□□□□ 0.01
CPSF7-218ENST00000537641 POLKQ9UBT6 870 aa15.1■□□□□ 0.01
CPSF7-218ENST00000537641 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
CPSF7-218ENST00000537641 AATKQ6ZMQ8 1374 aa15.1■□□□□ 0.01
CPSF7-218ENST00000537641 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-218ENST00000537641 GOLGA6L22H0YM25 854 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 VAMP4O75379 141 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 CDC45O75419 566 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 GNAI1P63096 354 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 NRKQ7Z2Y5 1582 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 PRKAR2BP31323 418 aa15.09■□□□□ 0.01
CPSF7-218ENST00000537641 TRIM44Q96DX7 344 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-218ENST00000537641 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
CPSF7-218ENST00000537641 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
CPSF7-218ENST00000537641 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
CPSF7-218ENST00000537641 SLIT1O75093 1534 aa15.07■□□□□ 0
CPSF7-218ENST00000537641 ZNF853P0CG23 659 aa15.07■□□□□ 0
CPSF7-218ENST00000537641 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
CPSF7-218ENST00000537641 CCDC173Q0VFZ6 552 aa15.06■□□□□ 0
CPSF7-218ENST00000537641 ARHGAP23Q9P227 1491 aa15.06■□□□□ 0
CPSF7-218ENST00000537641 RABEP1Q15276 862 aa15.06■□□□□ 0
CPSF7-218ENST00000537641 GAS2L3Q86XJ1 694 aa15.06■□□□□ 0
CPSF7-218ENST00000537641 NME9Q86XW9 330 aa15.06■□□□□ 0
CPSF7-218ENST00000537641 KLHL40Q2TBA0 621 aa15.05■□□□□ -0
CPSF7-218ENST00000537641 PPP1R9BQ96SB3 815 aa15.05■□□□□ -0
CPSF7-218ENST00000537641 DIP2AQ14689 1571 aa15.04■□□□□ -0
CPSF7-218ENST00000537641 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
CPSF7-218ENST00000537641 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
CPSF7-218ENST00000537641 SIRT2Q8IXJ6 389 aa15.04■□□□□ -0
CPSF7-218ENST00000537641 COG3Q96JB2 828 aa15.04■□□□□ -0
CPSF7-218ENST00000537641 ERBB4Q15303 1308 aa15.04■□□□□ -0
CPSF7-218ENST00000537641 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
CPSF7-218ENST00000537641 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
CPSF7-218ENST00000537641 LTKP29376 864 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms