RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.441e-15■■■■■ 80.2
CPSF7-218ENST00000537641 GTF2F1P35269 517 aaKnown RBP eCLIP14.59□□□□□ -0.075e-10■■■■■ 57.2
CPSF7-218ENST00000537641 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.392e-7■■■■■ 40.5
CPSF7-218ENST00000537641 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.374e-6■■■■■ 36.6
CPSF7-218ENST00000537641 PRPF4O43172 522 aaKnown RBP eCLIP12.92□□□□□ -0.349e-7■■■■■ 34.9
CPSF7-218ENST00000537641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.75□□□□□ -0.535e-8■■■■■ 34.6
CPSF7-218ENST00000537641 EFTUD2Q15029 972 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■■■■ 31.2
CPSF7-218ENST00000537641 SF3B4Q15427 424 aaKnown RBP eCLIP11.76□□□□□ -0.531e-9■■■■■ 29.1
CPSF7-218ENST00000537641 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.47e-6■■■■■ 28.7
CPSF7-218ENST00000537641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.13□□□□□ -0.318e-9■■■■■ 27.8
CPSF7-218ENST00000537641 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■■■■□ 23.9
CPSF7-218ENST00000537641 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■■■■□ 22.8
CPSF7-218ENST00000537641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.976e-8■■■■□ 22.6
CPSF7-218ENST00000537641 PCBP2Q15366 365 aaKnown RBP eCLIP11.95□□□□□ -0.59e-7■■■■□ 22
CPSF7-218ENST00000537641 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.253e-7■■■■□ 21.6
CPSF7-218ENST00000537641 ILF3Q12906 894 aaKnown RBP eCLIP11.21□□□□□ -0.622e-6■■■■□ 21.5
CPSF7-218ENST00000537641 TIAL1Q01085 375 aaKnown RBP eCLIP12.06□□□□□ -0.485e-6■■■■□ 21
CPSF7-218ENST00000537641 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■■□ 20.9
CPSF7-218ENST00000537641 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■□□ 18.8
CPSF7-218ENST00000537641 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.184e-7■■■□□ 16.7
CPSF7-218ENST00000537641 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.513e-8■■■□□ 15.8
CPSF7-218ENST00000537641 SF3A3Q12874 501 aaKnown RBP eCLIP12.96□□□□□ -0.345e-6■■■□□ 15
CPSF7-218ENST00000537641 PPIGQ13427 754 aaKnown RBP eCLIP11.72□□□□□ -0.539e-8■■■□□ 14.6
CPSF7-218ENST00000537641 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.424e-8■■□□□ 14
CPSF7-218ENST00000537641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.113e-9■■□□□ 13.7
CPSF7-218ENST00000537641 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.72□□□□□ -0.537e-16■■□□□ 13
CPSF7-218ENST00000537641 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.691e-8■■□□□ 12.8
CPSF7-218ENST00000537641 NCBP2P52298 156 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■■□□□ 12.6
CPSF7-218ENST00000537641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.07□□□□□ -0.164e-11■■□□□ 12.6
CPSF7-218ENST00000537641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.38□□□□□ -0.435e-9■■□□□ 12.4
CPSF7-218ENST00000537641 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.4□□□□□ -0.588e-9■■□□□ 12.1
CPSF7-218ENST00000537641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.371e-11■■□□□ 12.1
CPSF7-218ENST00000537641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13□□□□□ -0.338e-6■■□□□ 11.4
CPSF7-218ENST00000537641 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.437e-7■□□□□ 11.1
CPSF7-218ENST00000537641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.182e-8■□□□□ 11
CPSF7-218ENST00000537641 RBFOX2O43251 390 aaKnown RBP eCLIP10.11□□□□□ -0.794e-7■□□□□ 10.3
CPSF7-218ENST00000537641 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.317e-7■□□□□ 9.5
Retrieved 37 of 37 RNA–protein pairs in 9.6 ms