RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 KMT2DO14686 5537 aa4.25□□□□□ -1.73
CPSF7-218ENST00000537641 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
CPSF7-218ENST00000537641 MT1LQ93083 61 aa4.16□□□□□ -1.74
CPSF7-218ENST00000537641 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
CPSF7-218ENST00000537641 MT1EP04732 61 aa4.14□□□□□ -1.75
CPSF7-218ENST00000537641 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
CPSF7-218ENST00000537641 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
CPSF7-218ENST00000537641 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
CPSF7-218ENST00000537641 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
CPSF7-218ENST00000537641 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
CPSF7-218ENST00000537641 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
CPSF7-218ENST00000537641 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.78
CPSF7-218ENST00000537641 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
CPSF7-218ENST00000537641 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.78
CPSF7-218ENST00000537641 MT1GP13640 62 aa3.9□□□□□ -1.79
CPSF7-218ENST00000537641 MT1MQ8N339 61 aa3.87□□□□□ -1.79
CPSF7-218ENST00000537641 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
CPSF7-218ENST00000537641 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
CPSF7-218ENST00000537641 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
CPSF7-218ENST00000537641 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
CPSF7-218ENST00000537641 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
CPSF7-218ENST00000537641 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
CPSF7-218ENST00000537641 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
CPSF7-218ENST00000537641 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
CPSF7-218ENST00000537641 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
CPSF7-218ENST00000537641 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
CPSF7-218ENST00000537641 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
CPSF7-218ENST00000537641 KRTAP5-9P26371 169 aa3.65□□□□□ -1.82
CPSF7-218ENST00000537641 MT1AP04731 61 aa3.63□□□□□ -1.83
CPSF7-218ENST00000537641 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
CPSF7-218ENST00000537641 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
CPSF7-218ENST00000537641 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
CPSF7-218ENST00000537641 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
CPSF7-218ENST00000537641 SPRR2EP22531 72 aa3.52□□□□□ -1.85
CPSF7-218ENST00000537641 SPRR2BP35325 72 aa3.52□□□□□ -1.85
CPSF7-218ENST00000537641 SPRR2AP35326 72 aa3.52□□□□□ -1.85
CPSF7-218ENST00000537641 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CPSF7-218ENST00000537641 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CPSF7-218ENST00000537641 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CPSF7-218ENST00000537641 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
CPSF7-218ENST00000537641 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
CPSF7-218ENST00000537641 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
CPSF7-218ENST00000537641 NEBP20929 6669 aa3.43□□□□□ -1.86
CPSF7-218ENST00000537641 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
CPSF7-218ENST00000537641 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
CPSF7-218ENST00000537641 SPRR2DP22532 72 aa3.39□□□□□ -1.87
CPSF7-218ENST00000537641 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
CPSF7-218ENST00000537641 PRM1P04553 51 aa3.35□□□□□ -1.87
CPSF7-218ENST00000537641 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
CPSF7-218ENST00000537641 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
CPSF7-218ENST00000537641 MT3P25713 68 aa3.15□□□□□ -1.91
CPSF7-218ENST00000537641 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
CPSF7-218ENST00000537641 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
CPSF7-218ENST00000537641 MT4P47944 62 aa2.93□□□□□ -1.94
CPSF7-218ENST00000537641 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
CPSF7-218ENST00000537641 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
CPSF7-218ENST00000537641 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
CPSF7-218ENST00000537641 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
CPSF7-218ENST00000537641 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
CPSF7-218ENST00000537641 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
CPSF7-218ENST00000537641 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
CPSF7-218ENST00000537641 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
CPSF7-218ENST00000537641 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
CPSF7-218ENST00000537641 MUC5ACP98088 5654 aa2.57□□□□□ -2
CPSF7-218ENST00000537641 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
CPSF7-218ENST00000537641 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
CPSF7-218ENST00000537641 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CPSF7-218ENST00000537641 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CPSF7-218ENST00000537641 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
CPSF7-218ENST00000537641 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
CPSF7-218ENST00000537641 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
CPSF7-218ENST00000537641 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
CPSF7-218ENST00000537641 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CPSF7-218ENST00000537641 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CPSF7-218ENST00000537641 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CPSF7-218ENST00000537641 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
CPSF7-218ENST00000537641 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CPSF7-218ENST00000537641 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms