RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ADGRG1Q9Y653 693 aa9.78□□□□□ -0.84
PABPC1-220ENST00000522658 SCAF11Q99590 1463 aaKnown RBP9.78□□□□□ -0.84
PABPC1-220ENST00000522658 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
PABPC1-220ENST00000522658 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
PABPC1-220ENST00000522658 V9GY48 417 aaPredicted RBP9.77□□□□□ -0.85
PABPC1-220ENST00000522658 KANK1Q14678 1352 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 CEP152O94986 1710 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 DNAJB2P25686 324 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 COPS2P61201 443 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 LRRC7Q96NW7 1537 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 DUOX2Q9NRD8 1548 aa9.76□□□□□ -0.85
PABPC1-220ENST00000522658 MYOM3Q5VTT5 1437 aa9.75□□□□□ -0.85
PABPC1-220ENST00000522658 VPS8Q8N3P4 1428 aa9.75□□□□□ -0.85
PABPC1-220ENST00000522658 LRRC9Q6ZRR7 1453 aa9.75□□□□□ -0.85
PABPC1-220ENST00000522658 GFRA3O60609 400 aa9.74□□□□□ -0.85
PABPC1-220ENST00000522658 ZPR1O75312 459 aa9.74□□□□□ -0.85
PABPC1-220ENST00000522658 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
PABPC1-220ENST00000522658 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
PABPC1-220ENST00000522658 KIF15Q9NS87 1388 aa9.74□□□□□ -0.85
PABPC1-220ENST00000522658 UBR1Q8IWV7 1749 aa9.73□□□□□ -0.85
PABPC1-220ENST00000522658 SEMA3EO15041 775 aa9.73□□□□□ -0.85
PABPC1-220ENST00000522658 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
PABPC1-220ENST00000522658 BCANQ96GW7 911 aa9.73□□□□□ -0.85
PABPC1-220ENST00000522658 PRR14Q9BWN1 585 aa9.73□□□□□ -0.85
PABPC1-220ENST00000522658 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
PABPC1-220ENST00000522658 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
PABPC1-220ENST00000522658 RCCD1A6NED2 376 aa9.72□□□□□ -0.85
PABPC1-220ENST00000522658 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
PABPC1-220ENST00000522658 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
PABPC1-220ENST00000522658 PRDM15P57071 1507 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-220ENST00000522658 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
PABPC1-220ENST00000522658 SLIT1O75093 1534 aa9.71□□□□□ -0.86
PABPC1-220ENST00000522658 FCHSD2O94868 740 aa9.7□□□□□ -0.86
PABPC1-220ENST00000522658 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
PABPC1-220ENST00000522658 MROH1Q8NDA8 1641 aa9.7□□□□□ -0.86
PABPC1-220ENST00000522658 STRCP1A6NGW2 1772 aa9.7□□□□□ -0.86
PABPC1-220ENST00000522658 CROCC2H7BZ55 1655 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
PABPC1-220ENST00000522658 GGCXP38435 758 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 ARHGAP31Q2M1Z3 1444 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 EFCAB6Q5THR3 1501 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 RRP7BPQ9NSQ0 103 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 ARHGAP23Q9P227 1491 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 ALKQ9UM73 1620 aa9.69□□□□□ -0.86
PABPC1-220ENST00000522658 CFAP65Q6ZU64 1925 aaKnown RBP9.68□□□□□ -0.86
PABPC1-220ENST00000522658 PIK3C2BO00750 1634 aa9.68□□□□□ -0.86
PABPC1-220ENST00000522658 MSH6P52701 1360 aa9.68□□□□□ -0.86
PABPC1-220ENST00000522658 TMEM2Q9UHN6 1383 aa9.68□□□□□ -0.86
PABPC1-220ENST00000522658 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
PABPC1-220ENST00000522658 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
PABPC1-220ENST00000522658 TRAF7Q6Q0C0 670 aa9.68□□□□□ -0.86
PABPC1-220ENST00000522658 PTPN23Q9H3S7 1636 aa9.67□□□□□ -0.86
PABPC1-220ENST00000522658 MAP3K1Q13233 1512 aa9.67□□□□□ -0.86
PABPC1-220ENST00000522658 ANKRD30AQ9BXX3 1397 aa9.67□□□□□ -0.86
PABPC1-220ENST00000522658 SLC10A3P09131 477 aa9.67□□□□□ -0.86
PABPC1-220ENST00000522658 LTKP29376 864 aa9.67□□□□□ -0.86
PABPC1-220ENST00000522658 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
PABPC1-220ENST00000522658 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
PABPC1-220ENST00000522658 TMEM94Q12767 1356 aa9.66□□□□□ -0.86
PABPC1-220ENST00000522658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
PABPC1-220ENST00000522658 C14orf37Q86TY3 774 aa9.66□□□□□ -0.86
PABPC1-220ENST00000522658 PXYLP1Q8TE99 480 aa9.66□□□□□ -0.86
PABPC1-220ENST00000522658 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
PABPC1-220ENST00000522658 ADGRB3O60242 1522 aa9.66□□□□□ -0.86
PABPC1-220ENST00000522658 DAPK1P53355 1430 aa9.65□□□□□ -0.86
PABPC1-220ENST00000522658 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.86
PABPC1-220ENST00000522658 KDM5AP29375 1690 aaKnown RBP9.65□□□□□ -0.86
PABPC1-220ENST00000522658 ROBO1Q9Y6N7 1651 aa9.65□□□□□ -0.86
PABPC1-220ENST00000522658 TESPA1A2RU30 521 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-220ENST00000522658 RNF223E7ERA6 249 aa9.65□□□□□ -0.86
PABPC1-220ENST00000522658 TLL1O43897 1013 aa9.65□□□□□ -0.86
PABPC1-220ENST00000522658 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
PABPC1-220ENST00000522658 CFHP08603 1231 aa9.64□□□□□ -0.87
PABPC1-220ENST00000522658 KCNA6P17658 529 aa9.64□□□□□ -0.87
PABPC1-220ENST00000522658 KMT5BQ4FZB7 885 aa9.64□□□□□ -0.87
PABPC1-220ENST00000522658 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
PABPC1-220ENST00000522658 OATP04181 439 aa9.63□□□□□ -0.87
PABPC1-220ENST00000522658 HIC1Q14526 733 aa9.63□□□□□ -0.87
PABPC1-220ENST00000522658 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
PABPC1-220ENST00000522658 CHIC2Q9UKJ5 165 aa9.63□□□□□ -0.87
PABPC1-220ENST00000522658 ABCC5O15440 1437 aa9.63□□□□□ -0.87
PABPC1-220ENST00000522658 FGD6Q6ZV73 1430 aa9.63□□□□□ -0.87
PABPC1-220ENST00000522658 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 LMTK2Q8IWU2 1503 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 GPR37O15354 613 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 RBM26Q5T8P6 1007 aaKnown RBP9.62□□□□□ -0.87
PABPC1-220ENST00000522658 METTL3Q86U44 580 aaKnown RBP9.62□□□□□ -0.87
PABPC1-220ENST00000522658 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 JCADQ9P266 1359 aa9.62□□□□□ -0.87
PABPC1-220ENST00000522658 XIRP1Q702N8 1843 aaKnown RBP9.61□□□□□ -0.87
PABPC1-220ENST00000522658 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
PABPC1-220ENST00000522658 NWD1Q149M9 1564 aa9.61□□□□□ -0.87
PABPC1-220ENST00000522658 IDI1Q13907 227 aa9.6□□□□□ -0.87
PABPC1-220ENST00000522658 FAM50AQ14320 339 aaKnown RBP9.6□□□□□ -0.87
PABPC1-220ENST00000522658 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
PABPC1-220ENST00000522658 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
PABPC1-220ENST00000522658 FECHP22830 423 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms