RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
TRIM58-201ENST00000366481 ZSCAN30Q86W11 494 aa24.37■■□□□ 1.49
TRIM58-201ENST00000366481 ARHGEF28Q8N1W1 1705 aaKnown RBP24.36■■□□□ 1.49
TRIM58-201ENST00000366481 IPO8O15397 1037 aaKnown RBP24.36■■□□□ 1.49
TRIM58-201ENST00000366481 CCDC173Q0VFZ6 552 aa24.36■■□□□ 1.49
TRIM58-201ENST00000366481 HDAC1Q13547 482 aaPredicted RBP24.35■■□□□ 1.49
TRIM58-201ENST00000366481 KRT24Q2M2I5 525 aa24.35■■□□□ 1.49
TRIM58-201ENST00000366481 PUS7Q96PZ0 661 aaKnown RBP24.35■■□□□ 1.49
TRIM58-201ENST00000366481 CD163L1Q9NR16 1453 aa24.34■■□□□ 1.49
TRIM58-201ENST00000366481 SMC5Q8IY18 1101 aa24.34■■□□□ 1.49
TRIM58-201ENST00000366481 FCHSD2O94868 740 aa24.33■■□□□ 1.49
TRIM58-201ENST00000366481 KIF16BQ96L93 1317 aa24.33■■□□□ 1.49
TRIM58-201ENST00000366481 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.33■■□□□ 1.48
TRIM58-201ENST00000366481 PTPRMP28827 1452 aa24.33■■□□□ 1.48
TRIM58-201ENST00000366481 CHD1LQ86WJ1 897 aa24.32■■□□□ 1.48
TRIM58-201ENST00000366481 C8orf58Q8NAV2 365 aa24.32■■□□□ 1.48
TRIM58-201ENST00000366481 MBIPQ9NS73 344 aa24.32■■□□□ 1.48
TRIM58-201ENST00000366481 SSFA2P28290 1259 aa24.32■■□□□ 1.48
TRIM58-201ENST00000366481 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
TRIM58-201ENST00000366481 CT47B1P0C2W7 299 aaPredicted RBP24.31■■□□□ 1.48
TRIM58-201ENST00000366481 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
TRIM58-201ENST00000366481 RBM42Q9BTD8 480 aaKnown RBP24.31■■□□□ 1.48
TRIM58-201ENST00000366481 VAMP4O75379 141 aa24.31■■□□□ 1.48
TRIM58-201ENST00000366481 COL3A1P02461 1466 aaPredicted RBP24.3■■□□□ 1.48
TRIM58-201ENST00000366481 NFE2L2Q16236 605 aa24.29■■□□□ 1.48
TRIM58-201ENST00000366481 ZNF692Q9BU19 519 aaPredicted RBP24.29■■□□□ 1.48
TRIM58-201ENST00000366481 AEBP1Q8IUX7 1158 aa24.29■■□□□ 1.48
TRIM58-201ENST00000366481 NUCB1Q02818 461 aa24.29■■□□□ 1.48
TRIM58-201ENST00000366481 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
TRIM58-201ENST00000366481 XPCQ01831 940 aaPredicted RBP24.28■■□□□ 1.48
TRIM58-201ENST00000366481 CALD1Q05682 793 aaKnown RBP24.28■■□□□ 1.48
TRIM58-201ENST00000366481 CAVIN1Q6NZI2 390 aaKnown RBP24.28■■□□□ 1.48
TRIM58-201ENST00000366481 DIP2CQ9Y2E4 1556 aa24.28■■□□□ 1.48
TRIM58-201ENST00000366481 PTMSP20962 102 aa24.27■■□□□ 1.48
TRIM58-201ENST00000366481 MCTP1Q6DN14 999 aa24.27■■□□□ 1.48
TRIM58-201ENST00000366481 MYO5BQ9ULV0 1848 aa24.27■■□□□ 1.48
TRIM58-201ENST00000366481 RAB3GAP1Q15042 981 aa24.27■■□□□ 1.48
TRIM58-201ENST00000366481 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
TRIM58-201ENST00000366481 ZBTB7BO15156 539 aaPredicted RBP24.27■■□□□ 1.48
TRIM58-201ENST00000366481 CIZ1Q9ULV3 898 aaPredicted RBP24.26■■□□□ 1.47
TRIM58-201ENST00000366481 OFD1O75665 1012 aa24.26■■□□□ 1.47
TRIM58-201ENST00000366481 SIRT2Q8IXJ6 389 aa24.26■■□□□ 1.47
TRIM58-201ENST00000366481 MRPL50Q8N5N7 158 aaKnown RBP24.26■■□□□ 1.47
TRIM58-201ENST00000366481 IL16Q14005 1332 aa24.25■■□□□ 1.47
TRIM58-201ENST00000366481 CD2BP2O95400 341 aaKnown RBP24.25■■□□□ 1.47
TRIM58-201ENST00000366481 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
TRIM58-201ENST00000366481 A0A0U1RQG5 324 aaPredicted RBP24.24■■□□□ 1.47
TRIM58-201ENST00000366481 MIS18AQ9NYP9 233 aa24.24■■□□□ 1.47
TRIM58-201ENST00000366481 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
TRIM58-201ENST00000366481 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
TRIM58-201ENST00000366481 UQCRHLA0A096LP55 91 aa24.23■■□□□ 1.47
TRIM58-201ENST00000366481 UQCRHP07919 91 aa24.23■■□□□ 1.47
TRIM58-201ENST00000366481 C16orf71Q8IYS4 520 aaPredicted RBP24.23■■□□□ 1.47
TRIM58-201ENST00000366481 IL13P35225 146 aa24.23■■□□□ 1.47
TRIM58-201ENST00000366481 USP32Q8NFA0 1604 aa24.22■■□□□ 1.47
TRIM58-201ENST00000366481 K7ELQ4 463 aaPredicted RBP24.22■■□□□ 1.47
TRIM58-201ENST00000366481 MCM10Q7L590 875 aa24.22■■□□□ 1.47
TRIM58-201ENST00000366481 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
TRIM58-201ENST00000366481 COG3Q96JB2 828 aa24.22■■□□□ 1.47
TRIM58-201ENST00000366481 LRRC7Q96NW7 1537 aa24.22■■□□□ 1.47
TRIM58-201ENST00000366481 ALDH1L2Q3SY69 923 aa24.22■■□□□ 1.47
TRIM58-201ENST00000366481 PNPLA6Q8IY17 1366 aa24.21■■□□□ 1.47
TRIM58-201ENST00000366481 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
TRIM58-201ENST00000366481 PRDM10Q9NQV6 1147 aa24.21■■□□□ 1.47
TRIM58-201ENST00000366481 PPIP5K1Q6PFW1 1433 aa24.21■■□□□ 1.47
TRIM58-201ENST00000366481 DNTTIP2Q5QJE6 756 aaKnown RBP24.21■■□□□ 1.47
TRIM58-201ENST00000366481 SNX21Q969T3 373 aa24.21■■□□□ 1.47
TRIM58-201ENST00000366481 WASLO00401 505 aaPredicted RBP24.2■■□□□ 1.47
TRIM58-201ENST00000366481 PTMAP06454 111 aaKnown RBP24.2■■□□□ 1.46
TRIM58-201ENST00000366481 GNAI1P63096 354 aa24.2■■□□□ 1.46
TRIM58-201ENST00000366481 SULT6B1Q6IMI4 303 aa24.2■■□□□ 1.46
TRIM58-201ENST00000366481 GAS2L2Q8NHY3 880 aa24.19■■□□□ 1.46
TRIM58-201ENST00000366481 FOXD4L5Q5VV16 416 aaPredicted RBP24.19■■□□□ 1.46
TRIM58-201ENST00000366481 TBC1D9Q6ZT07 1266 aa24.19■■□□□ 1.46
TRIM58-201ENST00000366481 FOXD4L4Q8WXT5 416 aaPredicted RBP24.19■■□□□ 1.46
TRIM58-201ENST00000366481 OTUD7AQ8TE49 926 aaPredicted RBP24.18■■□□□ 1.46
TRIM58-201ENST00000366481 ARHGEF40Q8TER5 1519 aa24.18■■□□□ 1.46
TRIM58-201ENST00000366481 BAG4O95429 457 aaKnown RBP24.18■■□□□ 1.46
TRIM58-201ENST00000366481 RBM25P49756 843 aaKnown RBP24.18■■□□□ 1.46
TRIM58-201ENST00000366481 NEO1Q92859 1461 aa24.18■■□□□ 1.46
TRIM58-201ENST00000366481 ARHGAP31Q2M1Z3 1444 aa24.18■■□□□ 1.46
TRIM58-201ENST00000366481 METP08581 1390 aa24.18■■□□□ 1.46
TRIM58-201ENST00000366481 SMARCA5O60264 1052 aaPredicted RBP24.17■■□□□ 1.46
TRIM58-201ENST00000366481 PPP1R9BQ96SB3 815 aa24.17■■□□□ 1.46
TRIM58-201ENST00000366481 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
TRIM58-201ENST00000366481 NCBP3Q53F19 620 aaKnown RBP24.16■■□□□ 1.46
TRIM58-201ENST00000366481 ZMYM3Q14202 1370 aa24.16■■□□□ 1.46
TRIM58-201ENST00000366481 FAM135BQ49AJ0 1406 aa24.16■■□□□ 1.46
TRIM58-201ENST00000366481 KLHL40Q2TBA0 621 aa24.16■■□□□ 1.46
TRIM58-201ENST00000366481 ZFYVE9O95405 1425 aa24.15■■□□□ 1.46
TRIM58-201ENST00000366481 RNF214Q8ND24 703 aa24.14■■□□□ 1.46
TRIM58-201ENST00000366481 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.45
TRIM58-201ENST00000366481 MAP7D2Q96T17 732 aa24.14■■□□□ 1.45
TRIM58-201ENST00000366481 IFT57Q9NWB7 429 aa24.14■■□□□ 1.45
TRIM58-201ENST00000366481 PRPF40AO75400 957 aaKnown RBP24.13■■□□□ 1.45
TRIM58-201ENST00000366481 DDIT3P35638 169 aa24.13■■□□□ 1.45
TRIM58-201ENST00000366481 TPRNQ4KMQ1 711 aa24.13■■□□□ 1.45
TRIM58-201ENST00000366481 CFAP74Q9C0B2 1584 aa24.13■■□□□ 1.45
TRIM58-201ENST00000366481 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms