RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Arhgap23Q69ZH9 1483 aa18.17■□□□□ 0.5
Vcan-205ENSMUST00000159337 Pdcl2Q78Y63 240 aa18.17■□□□□ 0.5
Vcan-205ENSMUST00000159337 Trim27Q62158 513 aa18.16■□□□□ 0.5
Vcan-205ENSMUST00000159337 Anapc15-psA0A140T8L6 141 aa18.16■□□□□ 0.5
Vcan-205ENSMUST00000159337 Nectin2P32507 530 aa18.16■□□□□ 0.5
Vcan-205ENSMUST00000159337 Cgnl1Q6AW69 1298 aa18.16■□□□□ 0.5
Vcan-205ENSMUST00000159337 Tmco5bQ80X59 307 aa18.16■□□□□ 0.5
Vcan-205ENSMUST00000159337 Mdc1Q5PSV9 1707 aa18.16■□□□□ 0.5
Vcan-205ENSMUST00000159337 Vamp4O70480 141 aa18.15■□□□□ 0.5
Vcan-205ENSMUST00000159337 CenppQ9CZ92 286 aa18.15■□□□□ 0.5
Vcan-205ENSMUST00000159337 Cdc37l1Q9CZP7 335 aa18.15■□□□□ 0.5
Vcan-205ENSMUST00000159337 ImpactO55091 318 aa18.14■□□□□ 0.49
Vcan-205ENSMUST00000159337 Aldh8a1Q8BH00 487 aa18.13■□□□□ 0.49
Vcan-205ENSMUST00000159337 Zranb1Q7M760 708 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 Atp10aO54827 1508 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 VgfQ0VGU4 617 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 Zkscan1Q8BGS3 561 aaKnown RBP18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 Slc12a5Q91V14 1138 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 Ripk4Q9ERK0 786 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 OvosQ3UU35 1456 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 NinlQ6ZQ12 1394 aa18.12■□□□□ 0.49
Vcan-205ENSMUST00000159337 Erbb4Q61527 1308 aa18.11■□□□□ 0.49
Vcan-205ENSMUST00000159337 Rasa1E9PYG6 1038 aa18.11■□□□□ 0.49
Vcan-205ENSMUST00000159337 PalmQ9Z0P4 383 aa18.11■□□□□ 0.49
Vcan-205ENSMUST00000159337 Trim28Q62318 834 aa18.11■□□□□ 0.49
Vcan-205ENSMUST00000159337 Fez1Q8K0X8 392 aa18.11■□□□□ 0.49
Vcan-205ENSMUST00000159337 Knl1Q66JQ7 1612 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Ppip5k2Q6ZQB6 1129 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Ush1cQ9ES64 910 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Arhgef28P97433 1693 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Gse1Q3U3C9 1213 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Cavin2Q63918 418 aaKnown RBP18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Gcc1Q9D4H2 778 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Erich6bQ9D4S6 220 aa18.09■□□□□ 0.49
Vcan-205ENSMUST00000159337 Cep170bQ80U49 1574 aa18.08■□□□□ 0.49
Vcan-205ENSMUST00000159337 Pdia4P08003 638 aaKnown RBP18.08■□□□□ 0.48
Vcan-205ENSMUST00000159337 Ppp6r3Q922D4 844 aa18.08■□□□□ 0.48
Vcan-205ENSMUST00000159337 Ptch1Q61115 1434 aa18.08■□□□□ 0.48
Vcan-205ENSMUST00000159337 Eif4g2Q62448 906 aaKnown RBP18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 HnrnpuQ8VEK3 800 aaKnown RBP18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Ythdc2B2RR83 1445 aaKnown RBP18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Elp1Q7TT37 1333 aaKnown RBP18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Gnai1B2RSH2 354 aa18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Ccdc146E9Q9F7 977 aa18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Mcm2P97310 904 aa18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 4931400O07RikQ9D4M5 137 aa18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Gnai3Q9DC51 354 aa18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Synj2Q9D2G5 1434 aa18.07■□□□□ 0.48
Vcan-205ENSMUST00000159337 Vsig10D3YX43 558 aa18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 Gsto1O09131 240 aa18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 PtmaP26350 111 aa18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 Nucb1Q02819 459 aaKnown RBP18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 Nom1Q3UFM5 854 aaKnown RBP18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 MarsQ68FL6 902 aaKnown RBP18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 Mknk2Q8CDB0 459 aa18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 Stk26Q99JT2 416 aa18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 PtprmP28828 1452 aa18.06■□□□□ 0.48
Vcan-205ENSMUST00000159337 Adamts7Q68SA9 1657 aa18.05■□□□□ 0.48
Vcan-205ENSMUST00000159337 NktrP30415 1453 aa18.05■□□□□ 0.48
Vcan-205ENSMUST00000159337 PtmsQ9D0J8 101 aaKnown RBP18.05■□□□□ 0.48
Vcan-205ENSMUST00000159337 Rbm10Q99KG3 930 aaKnown RBP18.04■□□□□ 0.48
Vcan-205ENSMUST00000159337 Spef2Q8C9J3 1734 aa18.04■□□□□ 0.48
Vcan-205ENSMUST00000159337 Abca14E9Q8F8 1683 aa18.04■□□□□ 0.48
Vcan-205ENSMUST00000159337 AglF8VPN4 1532 aa18.04■□□□□ 0.48
Vcan-205ENSMUST00000159337 Pdia3P27773 505 aaKnown RBP18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Aldh1l2Q8K009 923 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Cyp27a1Q9DBG1 533 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 AdgbG3UZ78 1657 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Gm9992B2RWK3 458 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Becn1O88597 448 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Unc93aQ710D3 458 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Sos1Q62245 1319 aa18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Cdk12Q14AX6 1484 aaKnown RBP18.03■□□□□ 0.48
Vcan-205ENSMUST00000159337 Kif20bQ80WE4 1774 aaKnown RBP18.02■□□□□ 0.48
Vcan-205ENSMUST00000159337 Zfp777B9EKF4 885 aa18.02■□□□□ 0.47
Vcan-205ENSMUST00000159337 Irf5P56477 497 aa18.02■□□□□ 0.47
Vcan-205ENSMUST00000159337 Zdhhc9P59268 364 aa18.02■□□□□ 0.47
Vcan-205ENSMUST00000159337 FanclQ9CR14 375 aa18.01■□□□□ 0.47
Vcan-205ENSMUST00000159337 Ppp1r15aP17564 657 aa18.01■□□□□ 0.47
Vcan-205ENSMUST00000159337 Tm6sf1P58749 370 aa18.01■□□□□ 0.47
Vcan-205ENSMUST00000159337 Kif24Q6NWW5 1356 aa18.01■□□□□ 0.47
Vcan-205ENSMUST00000159337 Prrc2bQ7TPM1 1486 aaKnown RBP18■□□□□ 0.47
Vcan-205ENSMUST00000159337 Rnf123Q5XPI3 1314 aa18■□□□□ 0.47
Vcan-205ENSMUST00000159337 Stk11ipQ3TAA7 1072 aa18■□□□□ 0.47
Vcan-205ENSMUST00000159337 Pnma3Q8JZW8 466 aa18■□□□□ 0.47
Vcan-205ENSMUST00000159337 Rab11fip3Q8CHD8 1047 aa17.99■□□□□ 0.47
Vcan-205ENSMUST00000159337 Qser1A2BIE1 1698 aa17.99■□□□□ 0.47
Vcan-205ENSMUST00000159337 Arid3cA6PWV5 409 aa17.98■□□□□ 0.47
Vcan-205ENSMUST00000159337 Mrps27Q8BK72 415 aaKnown RBP17.98■□□□□ 0.47
Vcan-205ENSMUST00000159337 Ric3Q8BPM6 367 aa17.98■□□□□ 0.47
Vcan-205ENSMUST00000159337 Cdk19Q8BWD8 501 aa17.98■□□□□ 0.47
Vcan-205ENSMUST00000159337 PtprtQ99M80 1454 aa17.98■□□□□ 0.47
Vcan-205ENSMUST00000159337 Fam13aQ8BGI4 693 aa17.97■□□□□ 0.47
Vcan-205ENSMUST00000159337 Usp16Q99LG0 825 aa17.97■□□□□ 0.47
Vcan-205ENSMUST00000159337 Uhrf1bp1lA2RSJ4 1457 aa17.97■□□□□ 0.47
Vcan-205ENSMUST00000159337 Gzf1Q4VBD9 706 aa17.97■□□□□ 0.47
Vcan-205ENSMUST00000159337 Shq1Q7TMX5 569 aa17.97■□□□□ 0.47
Vcan-205ENSMUST00000159337 Kdm4aQ8BW72 1064 aa17.96■□□□□ 0.47
Vcan-205ENSMUST00000159337 Ahdc1Q6PAL7 1594 aaKnown RBP17.96■□□□□ 0.47
Vcan-205ENSMUST00000159337 PplQ9R269 1755 aa17.96■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms