RNA–Protein interactions for RNA: ENSMUST00000114989.8

Cnot4-202, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cnot4, Length 3,279 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-202ENSMUST00000114989 Usp40Q8BWR4 1235 aa7.21□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Apbb1Q9QXJ1 710 aa7.21□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Zfp646Q6NV66 1788 aa7.21□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Neurod2Q62414 383 aa7.21□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Safb2Q80YR5 991 aaKnown RBP7.21□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Dcaf11Q91VU6 549 aa7.21□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Tmem94Q7TSH8 1360 aa7.2□□□□□ -1.26
Cnot4-202ENSMUST00000114989 ErbinQ80TH2 1402 aa7.2□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Kif16bB1AVY7 1312 aa7.2□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Kif7B7ZNG0 1348 aa7.2□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Ybx3Q9JKB3 361 aaKnown RBP7.19□□□□□ -1.26
Cnot4-202ENSMUST00000114989 AU022751B1B0V2 589 aa7.19□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Kcna6Q61923 529 aa7.19□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Pdcl3Q8BVF2 240 aa7.19□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Speer4f1Q9D5Q6 258 aa7.19□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Znf335A2A5K6 1337 aa7.19□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Rab3gap2Q8BMG7 1366 aa7.18□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Prkrip1Q9CWV6 186 aaKnown RBP7.18□□□□□ -1.26
Cnot4-202ENSMUST00000114989 B4galnt3Q6L8S8 986 aa7.18□□□□□ -1.26
Cnot4-202ENSMUST00000114989 AfdnQ9QZQ1 1820 aaKnown RBP7.18□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Mst1rQ62190 1378 aa7.18□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Sbno1Q689Z5 1390 aa7.17□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Ubr2Q6WKZ8 1755 aa7.17□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Stag3O70576 1240 aa7.17□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Ipo9Q91YE6 1041 aa7.17□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Dbr1Q923B1 550 aa7.17□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Rwdd1Q9CQK7 243 aa7.17□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Col5a2Q3U962 1497 aa7.16□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Arid4bA2CG63 1314 aaKnown RBP7.16□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Znf526Q8BI66 675 aa7.16□□□□□ -1.26
Cnot4-202ENSMUST00000114989 TimelessQ9R1X4 1197 aa7.16□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Ttll13A4Q9F6 804 aa7.15□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Puf60Q3UEB3 564 aaKnown RBP7.15□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Ric1Q69ZJ7 1422 aa7.15□□□□□ -1.26
Cnot4-202ENSMUST00000114989 Gtf2a1Q99PM3 378 aa7.15□□□□□ -1.27
Cnot4-202ENSMUST00000114989 ChgaP26339 463 aaKnown RBP7.14□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Golga2Q921M4 999 aa7.14□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Ccdc30Q8BVF4 654 aa7.14□□□□□ -1.27
Cnot4-202ENSMUST00000114989 NgefQ8CHT1 710 aa7.14□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Stard8Q8K031 1019 aa7.14□□□□□ -1.27
Cnot4-202ENSMUST00000114989 DmtnQ9WV69 405 aa7.14□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Mink1Q9JM52 1308 aa7.13□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Atf7ipQ7TT18 1306 aa7.13□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Dnttip2Q8R2M2 758 aaKnown RBP7.12□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Atp1b4Q99ME6 356 aa7.12□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Plekhh1Q80TI1 1356 aa7.12□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Mbd3Q9Z2D8 285 aaKnown RBP7.12□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Gas2l2Q5SSG4 860 aa7.12□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Polr3glQ8R0C0 218 aa7.12□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Stk26Q99JT2 416 aa7.11□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Phrf1A6H619 1682 aa7.11□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Chmp5Q9D7S9 219 aa7.11□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Zc3h4Q6ZPZ3 1304 aaKnown RBP7.11□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Slit1Q80TR4 1531 aa7.11□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Ccdc6D3YZP9 469 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Tom1O88746 492 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Usp19Q3UJD6 1360 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 TnikP83510 1323 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Tjp1P39447 1745 aaKnown RBP7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 IqubQ8CDK3 788 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Rrp9Q91WM3 475 aaKnown RBP7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Trim26Q99PN3 545 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Akap11E9Q777 1895 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Zranb1Q7M760 708 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Tspyl2Q7TQI8 677 aa7.1□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Kiaa1107Q80TK0 1369 aa7.09□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Atxn3Q9CVD2 355 aa7.09□□□□□ -1.27
Cnot4-202ENSMUST00000114989 EspnQ9ET47 871 aa7.09□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Kif24Q6NWW5 1356 aa7.09□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Uspl1Q3ULM6 1089 aa7.09□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Kdm2bQ6P1G2 1309 aa7.09□□□□□ -1.27
Cnot4-202ENSMUST00000114989 Rad17Q6NXW6 688 aa7.09□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Slain2Q8CI08 581 aa7.09□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Pank1Q8K4K6 548 aa7.09□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Ttc41Q692V3 1318 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Apaf1O88879 1249 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 GsdmaQ9EST1 446 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Exosc9Q9JHI7 438 aaKnown RBP7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Pard3Q99NH2 1333 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 CanxP35564 591 aaKnown RBP7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Ralbp1Q62172 648 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Slx1bQ8BX32 270 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Bcl2l12Q9D3J3 255 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 P2rx7Q9Z1M0 595 aa7.08□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Cadps2Q8BYR5 1297 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Emilin2Q8K482 1074 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Iqcf3Q9D498 203 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 StrcQ8VIM6 1809 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Vps33bP59016 617 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 U2af1Q9D883 239 aaKnown RBP7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 CemipQ8BI06 1361 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Cald1E9QA15 768 aaKnown RBP7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Armcx1Q9CX83 456 aa7.07□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Trim30dE9PWL0 497 aa7.06□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Hmgb2P30681 210 aaKnown RBP7.06□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Rangap1P46061 589 aaKnown RBP7.06□□□□□ -1.28
Cnot4-202ENSMUST00000114989 4930567H17RikQ3V0K5 233 aa7.06□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Sipa1l3G3X9J0 1776 aa7.06□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Smc5Q8CG46 1101 aaKnown RBP7.06□□□□□ -1.28
Cnot4-202ENSMUST00000114989 Gprasp1Q5U4C1 1347 aa7.06□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms