RNA–Protein interactions for RNA: ENSMUST00000113251.9

Trem1-202, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

TSL 1 (best) BASIC

Gene Trem1, Length 2,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-202ENSMUST00000113251 Eif4a2P10630 407 aa18.71■□□□□ 0.59
Trem1-202ENSMUST00000113251 Dnajc10Q9DC23 793 aa18.7■□□□□ 0.58
Trem1-202ENSMUST00000113251 Gm21698A0A087WQP8 267 aa18.7■□□□□ 0.58
Trem1-202ENSMUST00000113251 Gm21671G3UY31 267 aa18.7■□□□□ 0.58
Trem1-202ENSMUST00000113251 Fchsd2Q3USJ8 740 aa18.7■□□□□ 0.58
Trem1-202ENSMUST00000113251 Card10P58660 1021 aa18.69■□□□□ 0.58
Trem1-202ENSMUST00000113251 PalmQ9Z0P4 383 aa18.69■□□□□ 0.58
Trem1-202ENSMUST00000113251 Slit2Q9R1B9 1521 aa18.68■□□□□ 0.58
Trem1-202ENSMUST00000113251 Usp19Q3UJD6 1360 aa18.68■□□□□ 0.58
Trem1-202ENSMUST00000113251 Kdm6aO70546 1401 aa18.68■□□□□ 0.58
Trem1-202ENSMUST00000113251 Nol11Q8BJW5 723 aaKnown RBP18.67■□□□□ 0.58
Trem1-202ENSMUST00000113251 Qtrt2B8ZXI1 415 aa18.67■□□□□ 0.58
Trem1-202ENSMUST00000113251 Cdhr2E9Q7P9 1308 aa18.67■□□□□ 0.58
Trem1-202ENSMUST00000113251 Mapk8ip3Q9ESN9 1337 aa18.67■□□□□ 0.58
Trem1-202ENSMUST00000113251 Kat6bQ8BRB7 1872 aa18.66■□□□□ 0.58
Trem1-202ENSMUST00000113251 Arfgef2A2A5R2 1792 aa18.66■□□□□ 0.58
Trem1-202ENSMUST00000113251 Ccne1Q61457 408 aa18.65■□□□□ 0.58
Trem1-202ENSMUST00000113251 Tmem132eQ6IEE6 982 aa18.64■□□□□ 0.57
Trem1-202ENSMUST00000113251 Amotl2Q8K371 772 aa18.64■□□□□ 0.57
Trem1-202ENSMUST00000113251 Ciz1Q8VEH2 845 aa18.64■□□□□ 0.57
Trem1-202ENSMUST00000113251 Slc5a4bQ91ZP4 660 aa18.64■□□□□ 0.57
Trem1-202ENSMUST00000113251 Znf526Q8BI66 675 aa18.62■□□□□ 0.57
Trem1-202ENSMUST00000113251 Ncbp3Q8BZR9 615 aaKnown RBP18.62■□□□□ 0.57
Trem1-202ENSMUST00000113251 Uspl1Q3ULM6 1089 aa18.62■□□□□ 0.57
Trem1-202ENSMUST00000113251 Acsbg1Q99PU5 721 aa18.62■□□□□ 0.57
Trem1-202ENSMUST00000113251 Trpm3Q5F4S9 1721 aa18.62■□□□□ 0.57
Trem1-202ENSMUST00000113251 Ofd1Q80Z25 1017 aa18.61■□□□□ 0.57
Trem1-202ENSMUST00000113251 Lrrc59Q922Q8 307 aaKnown RBP18.61■□□□□ 0.57
Trem1-202ENSMUST00000113251 MpripP97434 1024 aa18.6■□□□□ 0.57
Trem1-202ENSMUST00000113251 Eya1P97767 591 aa18.6■□□□□ 0.57
Trem1-202ENSMUST00000113251 Arhgef1Q61210 920 aaKnown RBP18.6■□□□□ 0.57
Trem1-202ENSMUST00000113251 Rab11fip3Q8CHD8 1047 aa18.6■□□□□ 0.57
Trem1-202ENSMUST00000113251 Iqcf3Q9D498 203 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 Uhrf1bp1B2KF50 1429 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 Slx1bQ8BX32 270 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 TkfcQ8VC30 578 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 Stk31Q99MW1 1018 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 Bcl2l12Q9D3J3 255 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 Slit1Q80TR4 1531 aa18.59■□□□□ 0.57
Trem1-202ENSMUST00000113251 Apaf1O88879 1249 aa18.58■□□□□ 0.57
Trem1-202ENSMUST00000113251 Txnrd1Q9JMH6 613 aa18.58■□□□□ 0.57
Trem1-202ENSMUST00000113251 Cavin4A2AMM0 362 aa18.58■□□□□ 0.56
Trem1-202ENSMUST00000113251 CrbnQ8C7D2 445 aa18.58■□□□□ 0.56
Trem1-202ENSMUST00000113251 Tcerg1Q8CGF7 1100 aaKnown RBP18.58■□□□□ 0.56
Trem1-202ENSMUST00000113251 Ahnak2E9PYB0 1738 aaKnown RBP18.57■□□□□ 0.56
Trem1-202ENSMUST00000113251 Ralbp1Q62172 648 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 Smim5Q8BT42 78 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 OptnQ8K3K8 584 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 Akap11E9Q777 1895 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 TnikP83510 1323 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 Simc1E9Q6E9 1354 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 Q4VA45 678 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 Gsdma3Q5Y4Y6 464 aa18.56■□□□□ 0.56
Trem1-202ENSMUST00000113251 CrklP47941 303 aa18.55■□□□□ 0.56
Trem1-202ENSMUST00000113251 Tnks1bp1P58871 1720 aa18.55■□□□□ 0.56
Trem1-202ENSMUST00000113251 Myo5bP21271 1818 aa18.54■□□□□ 0.56
Trem1-202ENSMUST00000113251 Ddx54Q8K4L0 874 aaKnown RBP18.54■□□□□ 0.56
Trem1-202ENSMUST00000113251 Pard3Q99NH2 1333 aa18.54■□□□□ 0.56
Trem1-202ENSMUST00000113251 Speer4f1Q9D5Q6 258 aa18.54■□□□□ 0.56
Trem1-202ENSMUST00000113251 Nhsl1Q8CAF4 1587 aa18.53■□□□□ 0.56
Trem1-202ENSMUST00000113251 Plekhd1B2RPU2 505 aa18.53■□□□□ 0.56
Trem1-202ENSMUST00000113251 Nolc1E9Q5C9 702 aaKnown RBP18.53■□□□□ 0.56
Trem1-202ENSMUST00000113251 Zfp444Q3TDV8 331 aaKnown RBP18.53■□□□□ 0.56
Trem1-202ENSMUST00000113251 Rad21Q61550 635 aaKnown RBP18.52■□□□□ 0.56
Trem1-202ENSMUST00000113251 HypkQ9CR41 129 aa18.52■□□□□ 0.56
Trem1-202ENSMUST00000113251 Col15a1O35206 1367 aa18.52■□□□□ 0.55
Trem1-202ENSMUST00000113251 Mcm10Q0VBD2 885 aa18.51■□□□□ 0.55
Trem1-202ENSMUST00000113251 Zeb2Q9R0G7 1215 aa18.51■□□□□ 0.55
Trem1-202ENSMUST00000113251 Ggt6Q6PDE7 497 aa18.51■□□□□ 0.55
Trem1-202ENSMUST00000113251 Wdr43Q6ZQL4 677 aaKnown RBP18.5■□□□□ 0.55
Trem1-202ENSMUST00000113251 Swt1Q9DBQ9 907 aa18.5■□□□□ 0.55
Trem1-202ENSMUST00000113251 Cacna1sQ02789 1880 aa18.5■□□□□ 0.55
Trem1-202ENSMUST00000113251 Dusp27Q148W8 1138 aa18.5■□□□□ 0.55
Trem1-202ENSMUST00000113251 RgmbQ7TQ33 436 aa18.49■□□□□ 0.55
Trem1-202ENSMUST00000113251 Plin1Q8CGN5 517 aa18.49■□□□□ 0.55
Trem1-202ENSMUST00000113251 Supt16hQ920B9 1047 aa18.49■□□□□ 0.55
Trem1-202ENSMUST00000113251 Gm10471E9Q1C7 252 aa18.48■□□□□ 0.55
Trem1-202ENSMUST00000113251 Cabp2Q9JLK4 216 aa18.48■□□□□ 0.55
Trem1-202ENSMUST00000113251 Fer1l6E0CZ42 1862 aa18.48■□□□□ 0.55
Trem1-202ENSMUST00000113251 Adgrb1Q3UHD1 1582 aa18.48■□□□□ 0.55
Trem1-202ENSMUST00000113251 Ppp1r37Q8BKR5 712 aa18.48■□□□□ 0.55
Trem1-202ENSMUST00000113251 Emilin2Q8K482 1074 aa18.46■□□□□ 0.55
Trem1-202ENSMUST00000113251 TmpoQ61033 693 aaKnown RBP18.46■□□□□ 0.55
Trem1-202ENSMUST00000113251 Amotl1Q9D4H4 968 aa18.46■□□□□ 0.55
Trem1-202ENSMUST00000113251 Zpr1Q62384 459 aa18.45■□□□□ 0.54
Trem1-202ENSMUST00000113251 Zranb3Q6NZP1 1069 aa18.45■□□□□ 0.54
Trem1-202ENSMUST00000113251 Ccdc30Q8BVF4 654 aa18.45■□□□□ 0.54
Trem1-202ENSMUST00000113251 Shank2Q80Z38 1476 aa18.45■□□□□ 0.54
Trem1-202ENSMUST00000113251 Neurod2Q62414 383 aa18.45■□□□□ 0.54
Trem1-202ENSMUST00000113251 Pak3Q61036 559 aa18.44■□□□□ 0.54
Trem1-202ENSMUST00000113251 Fbxo41Q6NS60 873 aa18.44■□□□□ 0.54
Trem1-202ENSMUST00000113251 Tnrc6cQ3UHC0 1690 aaKnown RBP18.44■□□□□ 0.54
Trem1-202ENSMUST00000113251 Cntnap1O54991 1385 aa18.43■□□□□ 0.54
Trem1-202ENSMUST00000113251 Nyap1Q6PFX7 833 aa18.42■□□□□ 0.54
Trem1-202ENSMUST00000113251 Nup153E9Q3G8 1462 aaKnown RBP18.42■□□□□ 0.54
Trem1-202ENSMUST00000113251 Mast2Q60592 1734 aa18.42■□□□□ 0.54
Trem1-202ENSMUST00000113251 Rtf1A2AQ19 715 aaKnown RBP18.42■□□□□ 0.54
Trem1-202ENSMUST00000113251 Cc2d1aQ8K1A6 943 aa18.42■□□□□ 0.54
Trem1-202ENSMUST00000113251 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.4■□□□□ 0.54
Trem1-202ENSMUST00000113251 Ecm2Q5FW85 670 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms