RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gnai3Q9DC51 354 aa20.42■□□□□ 0.86
Trim8-201ENSMUST00000026008 Wdr63B2RY71 923 aa20.42■□□□□ 0.86
Trim8-201ENSMUST00000026008 Pibf1E9Q6K3 756 aa20.42■□□□□ 0.86
Trim8-201ENSMUST00000026008 AU015836B2RUM3 263 aa20.42■□□□□ 0.86
Trim8-201ENSMUST00000026008 Ankrd44B2RXR6 993 aa20.42■□□□□ 0.86
Trim8-201ENSMUST00000026008 Tbc1d9Q3UYK3 1264 aa20.42■□□□□ 0.86
Trim8-201ENSMUST00000026008 Uhrf1bp1B2KF50 1429 aa20.41■□□□□ 0.86
Trim8-201ENSMUST00000026008 CarsQ9ER72 831 aaKnown RBP20.41■□□□□ 0.86
Trim8-201ENSMUST00000026008 Dmrtc1Q9D9R7 182 aa20.41■□□□□ 0.86
Trim8-201ENSMUST00000026008 PtprmP28828 1452 aa20.4■□□□□ 0.86
Trim8-201ENSMUST00000026008 Ppp1r15aP17564 657 aa20.4■□□□□ 0.86
Trim8-201ENSMUST00000026008 Txndc2Q6P902 515 aa20.4■□□□□ 0.86
Trim8-201ENSMUST00000026008 Ric3Q8BPM6 367 aa20.4■□□□□ 0.86
Trim8-201ENSMUST00000026008 Fgd1P52734 960 aa20.39■□□□□ 0.85
Trim8-201ENSMUST00000026008 Ahdc1Q6PAL7 1594 aaKnown RBP20.39■□□□□ 0.85
Trim8-201ENSMUST00000026008 Cul9Q80TT8 1865 aa20.39■□□□□ 0.85
Trim8-201ENSMUST00000026008 Uhrf1bp1lA2RSJ4 1457 aa20.38■□□□□ 0.85
Trim8-201ENSMUST00000026008 Triml2E9PW10 424 aa20.38■□□□□ 0.85
Trim8-201ENSMUST00000026008 Il4rP16382 810 aa20.38■□□□□ 0.85
Trim8-201ENSMUST00000026008 Gm10093D3YYI8 482 aa20.38■□□□□ 0.85
Trim8-201ENSMUST00000026008 Hdac1O09106 482 aaKnown RBP20.38■□□□□ 0.85
Trim8-201ENSMUST00000026008 Qser1A2BIE1 1698 aa20.37■□□□□ 0.85
Trim8-201ENSMUST00000026008 Trim27Q62158 513 aa20.37■□□□□ 0.85
Trim8-201ENSMUST00000026008 Cetn4Q8K4K1 168 aa20.36■□□□□ 0.85
Trim8-201ENSMUST00000026008 Naip7Q9JIB3 1402 aa20.36■□□□□ 0.85
Trim8-201ENSMUST00000026008 MpripP97434 1024 aa20.36■□□□□ 0.85
Trim8-201ENSMUST00000026008 Psme1P97371 249 aa20.36■□□□□ 0.85
Trim8-201ENSMUST00000026008 Wwc1Q5SXA9 1104 aa20.36■□□□□ 0.85
Trim8-201ENSMUST00000026008 Rsph3aQ3UFY4 516 aa20.35■□□□□ 0.85
Trim8-201ENSMUST00000026008 LifrP42703 1092 aa20.35■□□□□ 0.85
Trim8-201ENSMUST00000026008 Aifm3Q3TY86 605 aa20.35■□□□□ 0.85
Trim8-201ENSMUST00000026008 NgefQ8CHT1 710 aa20.35■□□□□ 0.85
Trim8-201ENSMUST00000026008 Rsph6aQ8CDR2 708 aa20.34■□□□□ 0.85
Trim8-201ENSMUST00000026008 Ddit3P35639 168 aa20.33■□□□□ 0.84
Trim8-201ENSMUST00000026008 Pknox2Q8BG99 474 aa20.33■□□□□ 0.84
Trim8-201ENSMUST00000026008 FanclQ9CR14 375 aa20.33■□□□□ 0.84
Trim8-201ENSMUST00000026008 Chmp4bQ9D8B3 224 aaKnown RBP20.33■□□□□ 0.84
Trim8-201ENSMUST00000026008 Atp7bQ64446 1462 aa20.33■□□□□ 0.84
Trim8-201ENSMUST00000026008 Smarca5Q91ZW3 1051 aaKnown RBP20.32■□□□□ 0.84
Trim8-201ENSMUST00000026008 Abca14E9Q8F8 1683 aa20.32■□□□□ 0.84
Trim8-201ENSMUST00000026008 SlkO54988 1233 aa20.32■□□□□ 0.84
Trim8-201ENSMUST00000026008 Eif4g2Q62448 906 aaKnown RBP20.32■□□□□ 0.84
Trim8-201ENSMUST00000026008 Synj2Q9D2G5 1434 aa20.31■□□□□ 0.84
Trim8-201ENSMUST00000026008 Arhgef28P97433 1693 aa20.3■□□□□ 0.84
Trim8-201ENSMUST00000026008 Stk31Q99MW1 1018 aa20.3■□□□□ 0.84
Trim8-201ENSMUST00000026008 Safb2Q80YR5 991 aaKnown RBP20.29■□□□□ 0.84
Trim8-201ENSMUST00000026008 Cc2d1aQ8K1A6 943 aa20.29■□□□□ 0.84
Trim8-201ENSMUST00000026008 Adamts7Q68SA9 1657 aa20.29■□□□□ 0.84
Trim8-201ENSMUST00000026008 NktrP30415 1453 aa20.28■□□□□ 0.84
Trim8-201ENSMUST00000026008 Kcnn1Q9EQR3 537 aa20.28■□□□□ 0.84
Trim8-201ENSMUST00000026008 Phf14Q9D4H9 881 aa20.28■□□□□ 0.84
Trim8-201ENSMUST00000026008 HnrnpuQ8VEK3 800 aaKnown RBP20.27■□□□□ 0.84
Trim8-201ENSMUST00000026008 4933402E13RikQ9D4D2 429 aa20.27■□□□□ 0.84
Trim8-201ENSMUST00000026008 Pdcl3Q8BVF2 240 aa20.27■□□□□ 0.84
Trim8-201ENSMUST00000026008 Ggnbp2Q5SV77 696 aa20.27■□□□□ 0.83
Trim8-201ENSMUST00000026008 Idi2Q8BFZ6 227 aa20.26■□□□□ 0.83
Trim8-201ENSMUST00000026008 Ercc6l2Q9JIM3 1537 aa20.26■□□□□ 0.83
Trim8-201ENSMUST00000026008 Znf541Q0GGX2 1363 aa20.25■□□□□ 0.83
Trim8-201ENSMUST00000026008 Eif4a2P10630 407 aa20.25■□□□□ 0.83
Trim8-201ENSMUST00000026008 Znf692Q3U381 531 aa20.25■□□□□ 0.83
Trim8-201ENSMUST00000026008 Rab11fip3Q8CHD8 1047 aa20.24■□□□□ 0.83
Trim8-201ENSMUST00000026008 Cgnl1Q6AW69 1298 aa20.24■□□□□ 0.83
Trim8-201ENSMUST00000026008 NpatQ8BMA5 1420 aa20.24■□□□□ 0.83
Trim8-201ENSMUST00000026008 Fam13aQ8BGI4 693 aa20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 MarsQ68FL6 902 aaKnown RBP20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 Paxip1Q6NZQ4 1056 aa20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 Ppip5k2Q6ZQB6 1129 aa20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 Casq1O09165 405 aa20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 CltcQ68FD5 1675 aaKnown RBP20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 Kif24Q6NWW5 1356 aa20.23■□□□□ 0.83
Trim8-201ENSMUST00000026008 Plekhg1F6S200 1446 aa20.22■□□□□ 0.83
Trim8-201ENSMUST00000026008 IghaA0A0A6YXW6 389 aa20.22■□□□□ 0.83
Trim8-201ENSMUST00000026008 HnrnpmQ9D0E1 729 aaKnown RBP20.22■□□□□ 0.83
Trim8-201ENSMUST00000026008 Prkar2bP31324 416 aa20.21■□□□□ 0.83
Trim8-201ENSMUST00000026008 CalcaP70160 136 aa20.21■□□□□ 0.83
Trim8-201ENSMUST00000026008 Bloc1s4Q8VED2 215 aa20.21■□□□□ 0.83
Trim8-201ENSMUST00000026008 Kif13aQ9EQW7 1749 aa20.21■□□□□ 0.83
Trim8-201ENSMUST00000026008 CenppQ9CZ92 286 aa20.21■□□□□ 0.83
Trim8-201ENSMUST00000026008 Chmp4cQ9D7F7 232 aa20.2■□□□□ 0.82
Trim8-201ENSMUST00000026008 Snap23O09044 210 aa20.2■□□□□ 0.82
Trim8-201ENSMUST00000026008 Usp32F8VPZ3 1604 aa20.2■□□□□ 0.82
Trim8-201ENSMUST00000026008 Aldh8a1Q8BH00 487 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Kdm4cQ8VCD7 1054 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Trim44Q9QXA7 346 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Prim1P20664 417 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Sox12Q04890 314 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Cavin2Q63918 418 aaKnown RBP20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Sos1Q62245 1319 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 1700010I14RikQ7TPG0 532 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Q9D2X8 372 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Gcc1Q9D4H2 778 aa20.19■□□□□ 0.82
Trim8-201ENSMUST00000026008 Pdia3P27773 505 aaKnown RBP20.18■□□□□ 0.82
Trim8-201ENSMUST00000026008 TmpoQ61033 693 aaKnown RBP20.18■□□□□ 0.82
Trim8-201ENSMUST00000026008 Ppp6r3Q922D4 844 aa20.18■□□□□ 0.82
Trim8-201ENSMUST00000026008 CatipB9EKE5 520 aa20.17■□□□□ 0.82
Trim8-201ENSMUST00000026008 EngaseQ8BX80 734 aa20.17■□□□□ 0.82
Trim8-201ENSMUST00000026008 Bag4Q8CI61 457 aa20.16■□□□□ 0.82
Trim8-201ENSMUST00000026008 Irx6Q9ER75 438 aa20.16■□□□□ 0.82
Trim8-201ENSMUST00000026008 Nucb1Q02819 459 aaKnown RBP20.15■□□□□ 0.82
Trim8-201ENSMUST00000026008 Kif20aP97329 887 aa20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms