RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C TBS1P38114 1094 aa5.01□□□□□ -1.61
GDE1YPL110C MAM1P40065 302 aa5.01□□□□□ -1.61
GDE1YPL110C SUM1P46676 1062 aa5.01□□□□□ -1.61
GDE1YPL110C SVL3Q03088 825 aaKnown RBP5.01□□□□□ -1.61
GDE1YPL110C RPB4P20433 221 aaPredicted RBP5□□□□□ -1.61
GDE1YPL110C PSE1P32337 1089 aaKnown RBP5□□□□□ -1.61
GDE1YPL110C NUF2P33895 451 aa5□□□□□ -1.61
GDE1YPL110C RTF1P53064 558 aa5□□□□□ -1.61
GDE1YPL110C BTN2P53286 410 aa5□□□□□ -1.61
GDE1YPL110C YNL035CP53962 389 aaKnown RBP5□□□□□ -1.61
GDE1YPL110C UBP3Q01477 912 aaKnown RBP RIP-Chip data5□□□□□ -1.61 RIP-Chip
GDE1YPL110C YMR102CQ03177 834 aa5□□□□□ -1.61
GDE1YPL110C NUP145P49687 1317 aa5□□□□□ -1.61
GDE1YPL110C PET494P07390 489 aaPredicted RBP5□□□□□ -1.61
GDE1YPL110C SKI2P35207 1287 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
GDE1YPL110C VPS24P36095 224 aaKnown RBP5□□□□□ -1.61
GDE1YPL110C UBX2Q04228 584 aa5□□□□□ -1.61
GDE1YPL110C PEX5P35056 612 aa5□□□□□ -1.61
GDE1YPL110C HOS3Q02959 697 aaKnown RBP5□□□□□ -1.61
GDE1YPL110C YDL121CQ07541 149 aa5□□□□□ -1.61
GDE1YPL110C CIR2Q08822 631 aa5□□□□□ -1.61
GDE1YPL110C SEC7P11075 2009 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C TY3B-IQ7LHG5 1498 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C SIT4P20604 311 aa4.99□□□□□ -1.61
GDE1YPL110C SEC14P24280 304 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C HXT5P38695 592 aa4.99□□□□□ -1.61
GDE1YPL110C RNH70P53331 553 aa4.99□□□□□ -1.61
GDE1YPL110C MDM1Q01846 1127 aa4.99□□□□□ -1.61
GDE1YPL110C ARO80Q04052 950 aa4.99□□□□□ -1.61
GDE1YPL110C CDC3P32457 520 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C UIP5P36137 443 aa4.99□□□□□ -1.61
GDE1YPL110C RTS1P38903 757 aa4.99□□□□□ -1.61
GDE1YPL110C PES4P39684 611 aa4.99□□□□□ -1.61
GDE1YPL110C SEC26P41810 973 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C GPI8P49018 411 aa4.99□□□□□ -1.61
GDE1YPL110C SPO19Q03029 223 aa4.99□□□□□ -1.61
GDE1YPL110C TMA64Q04600 565 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C TFC3P34111 1160 aa4.99□□□□□ -1.61
GDE1YPL110C ARL1P38116 183 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C YRB1P41920 201 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C RTC5Q12108 567 aaKnown RBP4.99□□□□□ -1.61
GDE1YPL110C BOI2P39969 1040 aa4.98□□□□□ -1.61
GDE1YPL110C YGL140CP53120 1219 aa4.98□□□□□ -1.61
GDE1YPL110C MAG2Q06436 670 aaKnown RBP4.98□□□□□ -1.61
GDE1YPL110C PMT7Q06644 662 aa4.98□□□□□ -1.61
GDE1YPL110C VMA4P22203 233 aaKnown RBP4.98□□□□□ -1.61
GDE1YPL110C YME2P32843 850 aa4.98□□□□□ -1.61
GDE1YPL110C SPC72P39723 622 aa4.98□□□□□ -1.61
GDE1YPL110C MET18P40469 1032 aa4.98□□□□□ -1.61
GDE1YPL110C GCD14P46959 383 aaPredicted RBP4.98□□□□□ -1.61
GDE1YPL110C TIM54P47045 478 aa4.98□□□□□ -1.61
GDE1YPL110C ORM1P53224 222 aa4.98□□□□□ -1.61
GDE1YPL110C YNL058CP53947 316 aa4.98□□□□□ -1.61
GDE1YPL110C ERB1Q04660 807 aaKnown RBP4.98□□□□□ -1.61
GDE1YPL110C SSQ1Q05931 657 aaPredicted RBP4.98□□□□□ -1.61
GDE1YPL110C SLK19Q08581 821 aaKnown RBP4.98□□□□□ -1.61
GDE1YPL110C MAK21Q12176 1025 aaKnown RBP4.98□□□□□ -1.61
GDE1YPL110C WHI5Q12416 295 aa4.98□□□□□ -1.61
GDE1YPL110C DRS2P39524 1355 aa4.98□□□□□ -1.61
GDE1YPL110C YML133CQ03099 1374 aa4.98□□□□□ -1.61
GDE1YPL110C YLL067CQ07888 1374 aa4.98□□□□□ -1.61
GDE1YPL110C YLL066CQ99208 1374 aa4.98□□□□□ -1.61
GDE1YPL110C HEM1P09950 548 aaPredicted RBP4.98□□□□□ -1.61
GDE1YPL110C RTT107P38850 1070 aa4.98□□□□□ -1.61
GDE1YPL110C IPL1P38991 367 aa4.98□□□□□ -1.61
GDE1YPL110C CDC45Q08032 650 aa4.98□□□□□ -1.61
GDE1YPL110C MAL31P38156 614 aa4.97□□□□□ -1.61
GDE1YPL110C HSM3P38348 480 aa4.97□□□□□ -1.61
GDE1YPL110C TOM71P38825 639 aaKnown RBP4.97□□□□□ -1.61
GDE1YPL110C VTI1Q04338 217 aa4.97□□□□□ -1.61
GDE1YPL110C ISA1Q07821 250 aaPredicted RBP4.97□□□□□ -1.61
GDE1YPL110C SEC15P22224 910 aa4.97□□□□□ -1.61
GDE1YPL110C CDC48P25694 835 aaKnown RBP4.97□□□□□ -1.61
GDE1YPL110C RSM7P47150 247 aa4.97□□□□□ -1.61
GDE1YPL110C ENP2P48234 707 aaKnown RBP4.97□□□□□ -1.61
GDE1YPL110C UTP22P53254 1237 aaPredicted RBP4.97□□□□□ -1.61
GDE1YPL110C VPS20Q04272 221 aa4.97□□□□□ -1.61
GDE1YPL110C NOC3Q07896 663 aaPredicted RBP4.97□□□□□ -1.61
GDE1YPL110C AVO1Q08236 1176 aa4.97□□□□□ -1.61
GDE1YPL110C ERG12P07277 443 aa4.96□□□□□ -1.61
GDE1YPL110C NFU1P32860 256 aa4.96□□□□□ -1.61
GDE1YPL110C DLD1P32891 587 aa4.96□□□□□ -1.61
GDE1YPL110C FTR1P40088 404 aa4.96□□□□□ -1.61
GDE1YPL110C YIL055CP40523 627 aaKnown RBP4.96□□□□□ -1.61
GDE1YPL110C RRN11Q04712 507 aa4.96□□□□□ -1.61
GDE1YPL110C SNU66Q12420 587 aaPredicted RBP4.96□□□□□ -1.61
GDE1YPL110C ATE1P16639 503 aa4.96□□□□□ -1.62
GDE1YPL110C TTI1P36097 1038 aa4.96□□□□□ -1.62
GDE1YPL110C ILV3P39522 585 aaKnown RBP4.96□□□□□ -1.62
GDE1YPL110C SAP1P39955 897 aaKnown RBP4.96□□□□□ -1.62
GDE1YPL110C NNF1P47149 201 aa4.96□□□□□ -1.62
GDE1YPL110C ECM11Q04110 302 aa4.96□□□□□ -1.62
GDE1YPL110C TFB4Q12004 338 aa4.96□□□□□ -1.62
GDE1YPL110C LEU1P07264 779 aaKnown RBP4.96□□□□□ -1.62
GDE1YPL110C NIP100P33420 868 aa4.96□□□□□ -1.62
GDE1YPL110C YEL1P34225 687 aa4.96□□□□□ -1.62
GDE1YPL110C YFR006WP43590 535 aa4.96□□□□□ -1.62
GDE1YPL110C RTC4P53850 401 aa4.96□□□□□ -1.62
GDE1YPL110C UTP13Q05946 817 aaKnown RBP4.96□□□□□ -1.62
GDE1YPL110C DUR1,2P32528 1835 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms