RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	RTF1	P53064	558 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	RTS3	P53289	263 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	HST1	P53685	503 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	BNI5	P53890	448 aa	Known RBP	7.52	□□□□□ -1.21
VTS1	YOR359W	MEH1	Q02205	184 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	GDE1	Q02979	1223 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	CMS1	Q07897	291 aa	Known RBP	7.52	□□□□□ -1.21
VTS1	YOR359W	TY4A-H	Q6Q5P6	413 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	SWI1	P09547	1314 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	PDR18	P53756	1333 aa		7.52	□□□□□ -1.21
VTS1	YOR359W	KEX1	P09620	729 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	UBP1	P25037	809 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	MNR2	P35724	969 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	HEL1	P36113	551 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	UBP14	P38237	781 aa	Known RBP	7.51	□□□□□ -1.21
VTS1	YOR359W	RFC5	P38251	354 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	YGL082W	P53155	381 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	HEH2	Q03281	663 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	YMR111C	Q04461	462 aa	Predicted RBP	7.51	□□□□□ -1.21
VTS1	YOR359W	PSK2	Q08217	1101 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	RUD3	Q12234	484 aa	Known RBP	7.51	□□□□□ -1.21
VTS1	YOR359W	RAV1	P47104	1357 aa		7.51	□□□□□ -1.21
VTS1	YOR359W	SEC66	P33754	206 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	SSZ1	P38788	538 aa	Known RBP	7.5	□□□□□ -1.21
VTS1	YOR359W	TY4A-J	P47023	414 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	ORM1	P53224	222 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	YML082W	Q04533	649 aa	Known RBP	7.5	□□□□□ -1.21
VTS1	YOR359W	YOR1	P53049	1477 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	DRS2	P39524	1355 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	CDC31	P06704	161 aa	Known RBP	7.5	□□□□□ -1.21
VTS1	YOR359W	MSM1	P22438	575 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	SWC3	P31376	625 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	LHS1	P36016	881 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	IES2	P40154	320 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.5	□□□□□ -1.21	not detected
VTS1	YOR359W	YJR142W	P47173	342 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	MSN5	P52918	1224 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	LSG1	P53145	640 aa	Known RBP	7.5	□□□□□ -1.21
VTS1	YOR359W	NMA111	P53920	997 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	FMP30	Q02883	468 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	SRC1	Q03707	834 aa		7.5	□□□□□ -1.21
VTS1	YOR359W	ABP140	Q08641	628 aa	Known RBP	7.5	□□□□□ -1.21
VTS1	YOR359W	SEC23	P15303	768 aa	Known RBP	7.49	□□□□□ -1.21
VTS1	YOR359W	COY1	P34237	679 aa		7.49	□□□□□ -1.21
VTS1	YOR359W	OMS1	Q06668	471 aa		7.49	□□□□□ -1.21
VTS1	YOR359W	DNL4	Q08387	944 aa	Predicted RBP	7.49	□□□□□ -1.21
VTS1	YOR359W	TY3B-I	Q7LHG5	1498 aa	Known RBP	7.49	□□□□□ -1.21
VTS1	YOR359W	SUI3	P09064	285 aa	Known RBP	7.48	□□□□□ -1.21
VTS1	YOR359W	RME1	P32338	300 aa	Known RBP	7.48	□□□□□ -1.21
VTS1	YOR359W	CSE1	P33307	960 aa		7.48	□□□□□ -1.21
VTS1	YOR359W	SPC72	P39723	622 aa		7.48	□□□□□ -1.21
VTS1	YOR359W	SDS3	P40505	327 aa		7.48	□□□□□ -1.21
VTS1	YOR359W	ALD4	P46367	519 aa	Known RBP	7.48	□□□□□ -1.21
VTS1	YOR359W	CTK3	P46963	296 aa	Predicted RBP	7.48	□□□□□ -1.21
VTS1	YOR359W	LSC1	P53598	329 aa	Known RBP	7.48	□□□□□ -1.21
VTS1	YOR359W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.48	□□□□□ -1.21	not detected
VTS1	YOR359W	BUD21	Q08492	214 aa	Predicted RBP	7.48	□□□□□ -1.21
VTS1	YOR359W	SNF2	P22082	1703 aa		7.48	□□□□□ -1.21
VTS1	YOR359W	HAP1	P0CE41	1502 aa		7.48	□□□□□ -1.21
VTS1	YOR359W	HMG1	P12683	1054 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	PTH2	P34222	208 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	MAD1	P40957	749 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	ILM1	P47155	203 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	DPL1	Q05567	589 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	COG4	Q06096	861 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	RSC2	Q06488	889 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	WHI5	Q12416	295 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	VPS15	P22219	1454 aa		7.47	□□□□□ -1.21
VTS1	YOR359W	PRT1	P06103	763 aa	Known RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	PET494	P07390	489 aa	Predicted RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	CDC60	P26637	1090 aa	Known RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	RPN2	P32565	945 aa	Known RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	PET112	P33893	541 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	SRL3	P36167	246 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	TBS1	P38114	1094 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	UBP13	P38187	747 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	RGD1	P38339	666 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	HSM3	P38348	480 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	OSH3	P38713	996 aa	Known RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	SPT8	P38915	602 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	MET18	P40469	1032 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	HYR1	P40581	163 aa	Known RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	CUS1	Q02554	436 aa	Predicted RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	RSM28	Q03430	361 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	ITT1	Q04638	464 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	EIS1	Q05050	843 aa	Known RBP	7.46	□□□□□ -1.21
VTS1	YOR359W	FUS2	Q05670	677 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	HMI1	Q12039	706 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	ATG9	Q12142	997 aa		7.46	□□□□□ -1.21
VTS1	YOR359W	KRS1	P15180	591 aa	Known RBP	7.46	□□□□□ -1.22
VTS1	YOR359W	CLB4	P24871	460 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	VID28	P40547	921 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	AIM21	P40563	679 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	POL32	P47110	350 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.46	□□□□□ -1.22	not detected
VTS1	YOR359W	KEL2	P50090	882 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	CWH41	P53008	833 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	PCL8	Q08966	492 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	HSP42	Q12329	375 aa		7.46	□□□□□ -1.22
VTS1	YOR359W	YPR015C	Q12531	247 aa		7.46	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms