RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W STR2P47164 639 aa8.74□□□□□ -1.01
HDA1YNL021W ITC1P53125 1264 aa8.74□□□□□ -1.01
HDA1YNL021W CDC55Q00362 526 aa8.74□□□□□ -1.01
HDA1YNL021W GDE1Q02979 1223 aa8.74□□□□□ -1.01
HDA1YNL021W ISR1Q06098 443 aaKnown RBP8.74□□□□□ -1.01
HDA1YNL021W PRI2P20457 528 aa8.73□□□□□ -1.01
HDA1YNL021W PTC4P38089 393 aa8.73□□□□□ -1.01
HDA1YNL021W FUI1P38196 639 aa8.73□□□□□ -1.01
HDA1YNL021W YGR053CP53234 283 aa8.73□□□□□ -1.01
HDA1YNL021W SPO14P36126 1683 aa8.73□□□□□ -1.01
HDA1YNL021W GAL11P19659 1081 aa8.72□□□□□ -1.01
HDA1YNL021W VMA4P22203 233 aaKnown RBP8.72□□□□□ -1.01
HDA1YNL021W GRX7P38068 203 aa8.72□□□□□ -1.01
HDA1YNL021W ECM16Q04217 1267 aaKnown RBP8.72□□□□□ -1.01
HDA1YNL021W PAF1P38351 445 aa8.72□□□□□ -1.01
HDA1YNL021W BOI2P39969 1040 aa8.72□□□□□ -1.01
HDA1YNL021W YNL011CP53980 444 aa8.72□□□□□ -1.01
HDA1YNL021W BDS1Q08347 646 aa8.72□□□□□ -1.01
HDA1YNL021W GDB1Q06625 1536 aa8.71□□□□□ -1.01
HDA1YNL021W ERR1P0CX10 437 aa8.71□□□□□ -1.01
HDA1YNL021W ERR2P0CX11 437 aa8.71□□□□□ -1.01
HDA1YNL021W CRP1P38845 465 aaKnown RBP8.71□□□□□ -1.01
HDA1YNL021W BRE1Q07457 700 aaKnown RBP8.71□□□□□ -1.01
HDA1YNL021W NUP157P40064 1391 aaKnown RBP8.71□□□□□ -1.02
HDA1YNL021W PDC1P06169 563 aaKnown RBP8.71□□□□□ -1.02
HDA1YNL021W CDC34P14682 295 aa8.71□□□□□ -1.02
HDA1YNL021W ISM1P48526 1002 aa8.71□□□□□ -1.02
HDA1YNL021W PEX8P53248 589 aa8.71□□□□□ -1.02
HDA1YNL021W YNR029CP53729 429 aaKnown RBP8.71□□□□□ -1.02
HDA1YNL021W PDR10P51533 1564 aa8.7□□□□□ -1.02
HDA1YNL021W CYT1P07143 309 aa8.7□□□□□ -1.02
HDA1YNL021W TYW3P53177 273 aa8.7□□□□□ -1.02
HDA1YNL021W OPI10Q08202 246 aa8.7□□□□□ -1.02
HDA1YNL021W ISU2Q12056 156 aa8.7□□□□□ -1.02
HDA1YNL021W SRM1P21827 482 aa8.69□□□□□ -1.02
HDA1YNL021W CDC11P32458 415 aa8.69□□□□□ -1.02
HDA1YNL021W TIM54P47045 478 aa8.69□□□□□ -1.02
HDA1YNL021W KAR1P11927 433 aa8.69□□□□□ -1.02
HDA1YNL021W RAD27P26793 382 aa8.69□□□□□ -1.02
HDA1YNL021W YFL034WP43564 1073 aa8.69□□□□□ -1.02
HDA1YNL021W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
HDA1YNL021W ALR1Q08269 859 aa8.69□□□□□ -1.02
HDA1YNL021W NOP14Q99207 810 aaKnown RBP8.69□□□□□ -1.02
HDA1YNL021W RAM1P22007 431 aa8.68□□□□□ -1.02
HDA1YNL021W VPS24P36095 224 aaKnown RBP8.68□□□□□ -1.02
HDA1YNL021W CHZ1P40019 153 aaPredicted RBP8.68□□□□□ -1.02
HDA1YNL021W FOX2Q02207 900 aaKnown RBP8.68□□□□□ -1.02
HDA1YNL021W FLC1Q08967 793 aa8.68□□□□□ -1.02
HDA1YNL021W YLR125WQ12138 136 aa8.68□□□□□ -1.02
HDA1YNL021W RPS6AP0CX37 236 aaKnown RBP8.68□□□□□ -1.02
HDA1YNL021W RPS6BP0CX38 236 aaPredicted RBP8.68□□□□□ -1.02
HDA1YNL021W VAC17P25591 423 aa8.68□□□□□ -1.02
HDA1YNL021W TDA5Q06417 326 aaKnown RBP8.68□□□□□ -1.02
HDA1YNL021W ARO1P08566 1588 aaKnown RBP8.67□□□□□ -1.02
HDA1YNL021W RSP5P39940 809 aaKnown RBP8.67□□□□□ -1.02
HDA1YNL021W PAC1P39946 494 aaKnown RBP8.67□□□□□ -1.02
HDA1YNL021W NAN1Q02931 896 aaKnown RBP8.67□□□□□ -1.02
HDA1YNL021W SRB8P25648 1427 aa8.66□□□□□ -1.02
HDA1YNL021W PWP2P25635 923 aaKnown RBP8.66□□□□□ -1.02
HDA1YNL021W STE5P32917 917 aa8.66□□□□□ -1.02
HDA1YNL021W GTT3P39996 337 aa8.66□□□□□ -1.02
HDA1YNL021W SAM37P50110 327 aa8.66□□□□□ -1.02
HDA1YNL021W YOR378WQ08902 515 aa8.66□□□□□ -1.02
HDA1YNL021W MSB4Q12317 492 aa8.66□□□□□ -1.02
HDA1YNL021W SWI5P08153 709 aa8.66□□□□□ -1.02
HDA1YNL021W CWH41P53008 833 aa8.66□□□□□ -1.02
HDA1YNL021W RSC4Q02206 625 aa8.66□□□□□ -1.02
HDA1YNL021W THI4P32318 326 aa8.65□□□□□ -1.02
HDA1YNL021W RPL8AP17076 256 aaKnown RBP8.65□□□□□ -1.03
HDA1YNL021W PRE9P23638 258 aaKnown RBP8.65□□□□□ -1.03
HDA1YNL021W MRC1P25588 1096 aa8.65□□□□□ -1.03
HDA1YNL021W SUT1P53032 299 aaKnown RBP8.65□□□□□ -1.03
HDA1YNL021W NMA111P53920 997 aa8.65□□□□□ -1.03
HDA1YNL021W OXR1Q08952 273 aa8.65□□□□□ -1.03
HDA1YNL021W LTE1P07866 1435 aa8.64□□□□□ -1.03
HDA1YNL021W THS1P04801 734 aaKnown RBP8.64□□□□□ -1.03
HDA1YNL021W TRX2P22803 104 aaKnown RBP8.64□□□□□ -1.03
HDA1YNL021W HXT5P38695 592 aa8.64□□□□□ -1.03
HDA1YNL021W CCP1P00431 361 aa8.63□□□□□ -1.03
HDA1YNL021W AIM21P40563 679 aa8.63□□□□□ -1.03
HDA1YNL021W KIP3P53086 805 aaKnown RBP8.63□□□□□ -1.03
HDA1YNL021W NOC3Q07896 663 aaPredicted RBP8.63□□□□□ -1.03
HDA1YNL021W ADR1P07248 1323 aa8.63□□□□□ -1.03
HDA1YNL021W YHL008CP38750 627 aa8.62□□□□□ -1.03
HDA1YNL021W TMA64Q04600 565 aaKnown RBP8.62□□□□□ -1.03
HDA1YNL021W IQG1Q12280 1495 aa8.62□□□□□ -1.03
HDA1YNL021W BUD3P25558 1636 aa8.62□□□□□ -1.03
HDA1YNL021W UGA4P32837 571 aa8.62□□□□□ -1.03
HDA1YNL021W MPE1P35728 441 aaKnown RBP8.61□□□□□ -1.03
HDA1YNL021W ERP2P39704 215 aa8.61□□□□□ -1.03
HDA1YNL021W TY4A-JP47023 414 aa8.61□□□□□ -1.03
HDA1YNL021W NKP1Q12493 238 aa8.61□□□□□ -1.03
HDA1YNL021W YJR120WP47157 116 aa8.6□□□□□ -1.03
HDA1YNL021W BSC2Q05611 235 aa8.6□□□□□ -1.03
HDA1YNL021W ATG20Q07528 640 aa8.6□□□□□ -1.03
HDA1YNL021W NTG2Q08214 380 aa8.6□□□□□ -1.03
HDA1YNL021W CAN1P04817 590 aa8.6□□□□□ -1.03
HDA1YNL021W MRPL33P20084 86 aa8.6□□□□□ -1.03
HDA1YNL021W ISW1P38144 1129 aa8.6□□□□□ -1.03
HDA1YNL021W CIC1P38779 376 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms