RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W ERF2Q06551 359 aa3□□□□□ -1.93
UBP15YMR304W YPR172WQ06608 200 aa3□□□□□ -1.93
UBP15YMR304W SSK22P25390 1331 aaPredicted RBP3□□□□□ -1.93
UBP15YMR304W TRK1P12685 1235 aa3□□□□□ -1.93
UBP15YMR304W SIT4P20604 311 aa3□□□□□ -1.93
UBP15YMR304W SRC1Q03707 834 aa3□□□□□ -1.93
UBP15YMR304W ADR1P07248 1323 aa2.99□□□□□ -1.93
UBP15YMR304W ELM1P32801 640 aa2.99□□□□□ -1.93
UBP15YMR304W PSR1Q07800 427 aa2.99□□□□□ -1.93
UBP15YMR304W CFT2Q12102 859 aaPredicted RBP2.99□□□□□ -1.93
UBP15YMR304W NUP42P49686 430 aaKnown RBP2.99□□□□□ -1.93
UBP15YMR304W ATF2P53296 535 aa2.99□□□□□ -1.93
UBP15YMR304W NOP8Q08287 484 aaPredicted RBP2.99□□□□□ -1.93
UBP15YMR304W COBP00163 385 aa2.99□□□□□ -1.93
UBP15YMR304W FIR1P40020 876 aa2.99□□□□□ -1.93
UBP15YMR304W RSC8P43609 557 aaKnown RBP2.99□□□□□ -1.93
UBP15YMR304W CRF1Q04930 467 aa2.99□□□□□ -1.93
UBP15YMR304W PCL8Q08966 492 aa2.99□□□□□ -1.93
UBP15YMR304W CST6P40535 587 aa2.98□□□□□ -1.93
UBP15YMR304W MED8P38304 223 aa2.98□□□□□ -1.93
UBP15YMR304W KIP3P53086 805 aaKnown RBP2.98□□□□□ -1.93
UBP15YMR304W RBA50Q04418 439 aa2.98□□□□□ -1.93
UBP15YMR304W ERV41Q04651 352 aa2.98□□□□□ -1.93
UBP15YMR304W NOT3P06102 836 aaKnown RBP2.97□□□□□ -1.93
UBP15YMR304W RAD51P25454 400 aa2.97□□□□□ -1.93
UBP15YMR304W RIX1P38883 763 aaPredicted RBP2.97□□□□□ -1.93
UBP15YMR304W HPC2Q01448 625 aa2.97□□□□□ -1.93
UBP15YMR304W SSM4P40318 1319 aa2.97□□□□□ -1.93
UBP15YMR304W POL3P15436 1097 aa2.97□□□□□ -1.93
UBP15YMR304W RPA135P22138 1203 aaKnown RBP2.97□□□□□ -1.93
UBP15YMR304W ART5P53244 586 aaKnown RBP2.97□□□□□ -1.93
UBP15YMR304W NIS1P53939 407 aa2.97□□□□□ -1.93
UBP15YMR304W PAC1P39946 494 aaKnown RBP2.96□□□□□ -1.94
UBP15YMR304W EMP47P43555 445 aa2.96□□□□□ -1.94
UBP15YMR304W BDP1P46678 594 aa2.96□□□□□ -1.94
UBP15YMR304W TUB4P53378 473 aa2.96□□□□□ -1.94
UBP15YMR304W SLY41P22215 453 aa2.96□□□□□ -1.94
UBP15YMR304W PAF1P38351 445 aa2.96□□□□□ -1.94
UBP15YMR304W AIR1P40507 360 aaKnown RBP2.96□□□□□ -1.94
UBP15YMR304W YNL115CP53925 644 aa2.96□□□□□ -1.94
UBP15YMR304W ETT1Q08421 412 aaKnown RBP2.96□□□□□ -1.94
UBP15YMR304W TY3A-GQ12173 290 aa2.96□□□□□ -1.94
UBP15YMR304W TY3A-IQ99219 290 aa2.96□□□□□ -1.94
UBP15YMR304W CTR9P89105 1077 aa2.96□□□□□ -1.94
UBP15YMR304W TBF1Q02457 562 aa2.96□□□□□ -1.94
UBP15YMR304W YLR225CQ05948 407 aaKnown RBP2.96□□□□□ -1.94
UBP15YMR304W NFI1Q12216 726 aa2.95□□□□□ -1.94
UBP15YMR304W NMD2P38798 1089 aaKnown RBP2.95□□□□□ -1.94
UBP15YMR304W RAT1Q02792 1006 aaKnown RBP2.95□□□□□ -1.94
UBP15YMR304W HKR1P41809 1802 aa2.95□□□□□ -1.94
UBP15YMR304W QCR6P00127 147 aa2.95□□□□□ -1.94
UBP15YMR304W MSH1P25846 959 aa2.95□□□□□ -1.94
UBP15YMR304W CTF4Q01454 927 aa2.95□□□□□ -1.94
UBP15YMR304W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
UBP15YMR304W RTC5Q12108 567 aaKnown RBP2.95□□□□□ -1.94
UBP15YMR304W PAH1P32567 862 aa2.94□□□□□ -1.94
UBP15YMR304W DEF1P35732 738 aaKnown RBP2.94□□□□□ -1.94
UBP15YMR304W ISW1P38144 1129 aa2.94□□□□□ -1.94
UBP15YMR304W TPS3P38426 1054 aaKnown RBP2.94□□□□□ -1.94
UBP15YMR304W RTF1P53064 558 aa2.94□□□□□ -1.94
UBP15YMR304W CSR2Q12734 1121 aa2.94□□□□□ -1.94
UBP15YMR304W THS1P04801 734 aaKnown RBP2.94□□□□□ -1.94
UBP15YMR304W HEM1P09950 548 aaPredicted RBP2.94□□□□□ -1.94
UBP15YMR304W GAL2P13181 574 aa2.94□□□□□ -1.94
UBP15YMR304W SPR3P41901 512 aa2.94□□□□□ -1.94
UBP15YMR304W GCD14P46959 383 aaPredicted RBP2.94□□□□□ -1.94
UBP15YMR304W CCM1P48237 864 aaPredicted RBP2.94□□□□□ -1.94
UBP15YMR304W MSB3P48566 633 aaPredicted RBP2.94□□□□□ -1.94
UBP15YMR304W TAN1P53072 289 aaPredicted RBP2.94□□□□□ -1.94
UBP15YMR304W KXD1P53158 218 aa2.94□□□□□ -1.94
UBP15YMR304W KRE33P53914 1056 aaKnown RBP2.94□□□□□ -1.94
UBP15YMR304W SUB1P54000 292 aaKnown RBP2.94□□□□□ -1.94
UBP15YMR304W GGA1Q06336 557 aa2.94□□□□□ -1.94
UBP15YMR304W ATG13Q06628 738 aa2.94□□□□□ -1.94
UBP15YMR304W ICL2Q12031 575 aa2.94□□□□□ -1.94
UBP15YMR304W CDC11P32458 415 aa2.94□□□□□ -1.94
UBP15YMR304W AFG2P32794 780 aa2.94□□□□□ -1.94
UBP15YMR304W ABZ1P37254 787 aaPredicted RBP2.94□□□□□ -1.94
UBP15YMR304W RKM3P38222 552 aa2.94□□□□□ -1.94
UBP15YMR304W RPN1P38764 993 aaKnown RBP2.94□□□□□ -1.94
UBP15YMR304W GYP7P48365 746 aa2.94□□□□□ -1.94
UBP15YMR304W KEL2P50090 882 aa2.94□□□□□ -1.94
UBP15YMR304W SCJ1P25303 377 aa2.93□□□□□ -1.94
UBP15YMR304W KNS1P32350 737 aaPredicted RBP2.93□□□□□ -1.94
UBP15YMR304W SWI3P32591 825 aa2.93□□□□□ -1.94
UBP15YMR304W LDH1P38139 375 aa2.93□□□□□ -1.94
UBP15YMR304W IAH1P41734 238 aa2.93□□□□□ -1.94
UBP15YMR304W GCR2Q01722 534 aa2.93□□□□□ -1.94
UBP15YMR304W DAP1Q12091 152 aa2.93□□□□□ -1.94
UBP15YMR304W GIN4Q12263 1142 aa2.93□□□□□ -1.94
UBP15YMR304W YKU70P32807 602 aa2.92□□□□□ -1.94
UBP15YMR304W XKS1P42826 600 aa2.92□□□□□ -1.94
UBP15YMR304W ZDS1P50111 915 aaKnown RBP2.92□□□□□ -1.94
UBP15YMR304W YPL034WQ03083 165 aa2.92□□□□□ -1.94
UBP15YMR304W ROX1P25042 368 aa2.92□□□□□ -1.94
UBP15YMR304W CIN4P39110 191 aa2.92□□□□□ -1.94
UBP15YMR304W ECM1P39715 212 aa2.92□□□□□ -1.94
UBP15YMR304W CWH41P53008 833 aa2.92□□□□□ -1.94
UBP15YMR304W AGE1Q04412 482 aa2.92□□□□□ -1.94
UBP15YMR304W CUP1-1P0CX80 61 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms