RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W SWI5P08153 709 aa3.56□□□□□ -1.84
TRM2YKR056W UBP1P25037 809 aa3.56□□□□□ -1.84
TRM2YKR056W UTR2P32623 467 aa3.56□□□□□ -1.84
TRM2YKR056W PPG1P32838 368 aa3.56□□□□□ -1.84
TRM2YKR056W NTH2P35172 780 aa3.56□□□□□ -1.84
TRM2YKR056W RPS26AP39938 119 aaKnown RBP3.56□□□□□ -1.84
TRM2YKR056W RPS26BP39939 119 aaKnown RBP3.56□□□□□ -1.84
TRM2YKR056W ATG3P40344 310 aa3.56□□□□□ -1.84
TRM2YKR056W JJJ2P46997 583 aa3.56□□□□□ -1.84
TRM2YKR056W TY1A-DR2Q03964 440 aaKnown RBP3.56□□□□□ -1.84
TRM2YKR056W NGR1P32831 672 aaKnown RBP3.55□□□□□ -1.84
TRM2YKR056W SWE1P32944 819 aa3.55□□□□□ -1.84
TRM2YKR056W YKL091CP33324 310 aaKnown RBP3.55□□□□□ -1.84
TRM2YKR056W RTS3P53289 263 aa3.55□□□□□ -1.84
TRM2YKR056W RPB10P22139 70 aa3.54□□□□□ -1.84
TRM2YKR056W TOM20P35180 183 aa3.54□□□□□ -1.84
TRM2YKR056W TBS1P38114 1094 aa3.54□□□□□ -1.84
TRM2YKR056W CAB1Q04430 367 aa3.54□□□□□ -1.84
TRM2YKR056W BDF2Q07442 638 aa3.54□□□□□ -1.84
TRM2YKR056W TRS33Q99394 268 aa3.54□□□□□ -1.84
TRM2YKR056W CYC8P14922 966 aa3.54□□□□□ -1.84
TRM2YKR056W RRP14P36080 434 aaKnown RBP3.54□□□□□ -1.84
TRM2YKR056W PBP2P38151 413 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
TRM2YKR056W RPS6AP0CX37 236 aaKnown RBP3.53□□□□□ -1.84
TRM2YKR056W RPS6BP0CX38 236 aaPredicted RBP3.53□□□□□ -1.84
TRM2YKR056W TSR4P25040 408 aa3.53□□□□□ -1.84
TRM2YKR056W GRX4P32642 244 aa3.53□□□□□ -1.84
TRM2YKR056W ISC10P32645 267 aa3.53□□□□□ -1.84
TRM2YKR056W MAD1P40957 749 aa3.53□□□□□ -1.84
TRM2YKR056W BUD9P53226 547 aa3.53□□□□□ -1.84
TRM2YKR056W RMD1Q03441 430 aa3.53□□□□□ -1.84
TRM2YKR056W YPQ2Q06328 317 aa3.53□□□□□ -1.84
TRM2YKR056W PPM2Q08282 695 aa3.53□□□□□ -1.84
TRM2YKR056W STI1P15705 589 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
TRM2YKR056W SPR3P41901 512 aa3.52□□□□□ -1.85
TRM2YKR056W SUM1P46676 1062 aa3.52□□□□□ -1.85
TRM2YKR056W PSH1Q12161 406 aa3.52□□□□□ -1.85
TRM2YKR056W GRX1P25373 110 aaKnown RBP3.52□□□□□ -1.85
TRM2YKR056W SHM1P37292 490 aaPredicted RBP3.52□□□□□ -1.85
TRM2YKR056W FPR3P38911 411 aaKnown RBP3.52□□□□□ -1.85
TRM2YKR056W YGR122WP53272 402 aa3.52□□□□□ -1.85
TRM2YKR056W YNL165WP53891 406 aa3.52□□□□□ -1.85
TRM2YKR056W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
TRM2YKR056W AOS1Q06624 347 aa3.52□□□□□ -1.85
TRM2YKR056W HXK1P04806 485 aaKnown RBP3.51□□□□□ -1.85
TRM2YKR056W CYT1P07143 309 aa3.51□□□□□ -1.85
TRM2YKR056W PDC6P26263 563 aaKnown RBP3.51□□□□□ -1.85
TRM2YKR056W YJL049WP47048 450 aa3.51□□□□□ -1.85
TRM2YKR056W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
TRM2YKR056W HUL5P53119 910 aa3.51□□□□□ -1.85
TRM2YKR056W YNL011CP53980 444 aa3.51□□□□□ -1.85
TRM2YKR056W CDC53Q12018 815 aaKnown RBP3.51□□□□□ -1.85
TRM2YKR056W WRS1Q12109 432 aaKnown RBP3.51□□□□□ -1.85
TRM2YKR056W NHA1Q99271 985 aa3.51□□□□□ -1.85
TRM2YKR056W RPS31P05759 152 aaKnown RBP3.5□□□□□ -1.85
TRM2YKR056W RAD2P07276 1031 aa3.5□□□□□ -1.85
TRM2YKR056W PEP7P32609 515 aa3.5□□□□□ -1.85
TRM2YKR056W VPS35P34110 944 aa3.5□□□□□ -1.85
TRM2YKR056W HXT5P38695 592 aa3.5□□□□□ -1.85
TRM2YKR056W FAA3P39002 694 aa3.5□□□□□ -1.85
TRM2YKR056W YFL034WP43564 1073 aa3.5□□□□□ -1.85
TRM2YKR056W ESF1Q06344 628 aaKnown RBP3.5□□□□□ -1.85
TRM2YKR056W UFD2P54860 961 aa3.5□□□□□ -1.85
TRM2YKR056W CDC55Q00362 526 aa3.5□□□□□ -1.85
TRM2YKR056W CLN2P20438 545 aa3.49□□□□□ -1.85
TRM2YKR056W LIP5P32875 414 aa3.49□□□□□ -1.85
TRM2YKR056W DUT1P33317 147 aa3.49□□□□□ -1.85
TRM2YKR056W MNR2P35724 969 aa3.49□□□□□ -1.85
TRM2YKR056W ALG14P38242 237 aa3.49□□□□□ -1.85
TRM2YKR056W YHR020WP38708 688 aaKnown RBP3.49□□□□□ -1.85
TRM2YKR056W OSW7P43611 510 aa3.49□□□□□ -1.85
TRM2YKR056W YJR142WP47173 342 aa3.49□□□□□ -1.85
TRM2YKR056W TPO2P53283 614 aa3.49□□□□□ -1.85
TRM2YKR056W RSC4Q02206 625 aa3.49□□□□□ -1.85
TRM2YKR056W FOX2Q02207 900 aaKnown RBP3.49□□□□□ -1.85
TRM2YKR056W MED7Q08278 222 aa3.49□□□□□ -1.85
TRM2YKR056W SSB1P11484 613 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W GCD6P32501 712 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W PGM2P37012 569 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W MNN1P39106 762 aa3.48□□□□□ -1.85
TRM2YKR056W SSB2P40150 613 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W FAA4P47912 694 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W YGR053CP53234 283 aa3.48□□□□□ -1.85
TRM2YKR056W MRPL33P20084 86 aa3.48□□□□□ -1.85
TRM2YKR056W PET112P33893 541 aa3.48□□□□□ -1.85
TRM2YKR056W YKL069WP36088 180 aa3.48□□□□□ -1.85
TRM2YKR056W UBP12P39538 1254 aa3.48□□□□□ -1.85
TRM2YKR056W NUP82P40368 713 aa3.48□□□□□ -1.85
TRM2YKR056W CWH41P53008 833 aa3.48□□□□□ -1.85
TRM2YKR056W SUT1P53032 299 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W POB3Q04636 552 aaKnown RBP3.48□□□□□ -1.85
TRM2YKR056W AI3P03877 415 aa3.47□□□□□ -1.85
TRM2YKR056W PGM1P33401 570 aaKnown RBP3.47□□□□□ -1.85
TRM2YKR056W MSC7P38694 644 aa3.47□□□□□ -1.85
TRM2YKR056W PMC1P38929 1173 aaPredicted RBP3.47□□□□□ -1.85
TRM2YKR056W RPP1AP05318 106 aaPredicted RBP3.46□□□□□ -1.85
TRM2YKR056W MET6P05694 767 aaKnown RBP3.46□□□□□ -1.85
TRM2YKR056W UGA4P32837 571 aa3.46□□□□□ -1.85
TRM2YKR056W TIM23P32897 222 aa3.46□□□□□ -1.85
TRM2YKR056W YKR073CP36153 106 aa3.46□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms