RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C GIN4Q12263 1142 aa13.84□□□□□ -0.19
YKR040CYKR040C FLO1P32768 1537 aa13.84□□□□□ -0.19
YKR040CYKR040C MSH4P40965 878 aaPredicted RBP13.83□□□□□ -0.2
YKR040CYKR040C PEX29Q03370 554 aa13.82□□□□□ -0.2
YKR040CYKR040C PPM2Q08282 695 aa13.82□□□□□ -0.2
YKR040CYKR040C YPL260WQ08977 551 aa13.82□□□□□ -0.2
YKR040CYKR040C KIN1P13185 1064 aa13.81□□□□□ -0.2
YKR040CYKR040C BBC1P47068 1157 aa13.81□□□□□ -0.2
YKR040CYKR040C PKH3Q03306 898 aaPredicted RBP13.81□□□□□ -0.2
YKR040CYKR040C RBA50Q04418 439 aa13.81□□□□□ -0.2
YKR040CYKR040C TAH18Q12181 623 aa13.81□□□□□ -0.2
YKR040CYKR040C SRF1Q12516 437 aa13.81□□□□□ -0.2
YKR040CYKR040C APE3P37302 537 aaKnown RBP13.8□□□□□ -0.2
YKR040CYKR040C RSC30P38781 883 aa13.8□□□□□ -0.2
YKR040CYKR040C STM1P39015 273 aaKnown RBP13.8□□□□□ -0.2
YKR040CYKR040C YDL124WQ07551 312 aaKnown RBP13.8□□□□□ -0.2
YKR040CYKR040C OPI1P21957 404 aa13.79□□□□□ -0.2
YKR040CYKR040C SPT21P35209 758 aa13.79□□□□□ -0.2
YKR040CYKR040C TUB2P02557 457 aaKnown RBP13.78□□□□□ -0.2
YKR040CYKR040C ACA1P39970 489 aa13.78□□□□□ -0.2
YKR040CYKR040C JIP4Q03361 876 aa13.78□□□□□ -0.2
YKR040CYKR040C COQ1P18900 473 aa13.77□□□□□ -0.21
YKR040CYKR040C MOT2P34909 587 aaKnown RBP13.77□□□□□ -0.21
YKR040CYKR040C LAM4P38800 1345 aa13.77□□□□□ -0.21
YKR040CYKR040C SLN1P39928 1220 aaPredicted RBP13.77□□□□□ -0.21
YKR040CYKR040C SNU71P53207 620 aaKnown RBP13.77□□□□□ -0.21
YKR040CYKR040C RAD50P12753 1312 aa13.76□□□□□ -0.21
YKR040CYKR040C VAS1P07806 1104 aaKnown RBP13.76□□□□□ -0.21
YKR040CYKR040C RTS1P38903 757 aa13.76□□□□□ -0.21
YKR040CYKR040C RRP8P38961 392 aaKnown RBP13.76□□□□□ -0.21
YKR040CYKR040C MPH3P0CE00 602 aa13.75□□□□□ -0.21
YKR040CYKR040C PRE8P23639 250 aa13.75□□□□□ -0.21
YKR040CYKR040C CST26P38226 397 aa13.75□□□□□ -0.21
YKR040CYKR040C MRD1Q06106 887 aaKnown RBP13.75□□□□□ -0.21
YKR040CYKR040C RIM20Q12033 661 aa13.75□□□□□ -0.21
YKR040CYKR040C OCT1P35999 772 aa13.74□□□□□ -0.21
YKR040CYKR040C MET1P36150 593 aa13.74□□□□□ -0.21
YKR040CYKR040C ASH1P34233 588 aa13.73□□□□□ -0.21
YKR040CYKR040C SRM1P21827 482 aa13.72□□□□□ -0.21
YKR040CYKR040C VID27P40157 782 aa13.72□□□□□ -0.21
YKR040CYKR040C FPR4Q06205 392 aaPredicted RBP13.72□□□□□ -0.21
YKR040CYKR040C LAP2Q10740 671 aa13.72□□□□□ -0.21
YKR040CYKR040C YHL050CP38721 697 aa13.71□□□□□ -0.21
YKR040CYKR040C LYS14P40971 790 aa13.71□□□□□ -0.21
YKR040CYKR040C NET1P47035 1189 aa13.71□□□□□ -0.21
YKR040CYKR040C NCS6P53088 359 aa13.71□□□□□ -0.21
YKR040CYKR040C RAD61Q99359 647 aa13.71□□□□□ -0.21
YKR040CYKR040C CHO2P05374 869 aaKnown RBP13.7□□□□□ -0.22
YKR040CYKR040C SPR3P41901 512 aa13.7□□□□□ -0.22
YKR040CYKR040C RPS15Q01855 142 aaKnown RBP13.7□□□□□ -0.22
YKR040CYKR040C FBP1P09201 348 aa13.69□□□□□ -0.22
YKR040CYKR040C YDJ1P25491 409 aaKnown RBP13.69□□□□□ -0.22
YKR040CYKR040C AAP1P37898 856 aaKnown RBP13.69□□□□□ -0.22
YKR040CYKR040C SUB2Q07478 446 aaKnown RBP13.69□□□□□ -0.22
YKR040CYKR040C ERG12P07277 443 aa13.68□□□□□ -0.22
YKR040CYKR040C VAB2P40003 282 aa13.68□□□□□ -0.22
YKR040CYKR040C SKG3Q06315 1026 aa13.68□□□□□ -0.22
YKR040CYKR040C SSF2Q12153 453 aaPredicted RBP13.68□□□□□ -0.22
YKR040CYKR040C KRS1P15180 591 aaKnown RBP13.67□□□□□ -0.22
YKR040CYKR040C MCD4P36051 919 aa13.67□□□□□ -0.22
YKR040CYKR040C TIF4631P39935 952 aaKnown RBP13.67□□□□□ -0.22
YKR040CYKR040C UFD2P54860 961 aa13.67□□□□□ -0.22
YKR040CYKR040C IXR1P33417 597 aa13.66□□□□□ -0.22
YKR040CYKR040C VPS8P39702 1274 aa13.66□□□□□ -0.22
YKR040CYKR040C YJL007CP47080 104 aa13.66□□□□□ -0.22
YKR040CYKR040C CFT2Q12102 859 aaPredicted RBP13.66□□□□□ -0.22
YKR040CYKR040C BRN1P38170 754 aa13.65□□□□□ -0.22
YKR040CYKR040C ERG7P38604 731 aa13.65□□□□□ -0.22
YKR040CYKR040C SGD1Q06132 899 aa13.65□□□□□ -0.22
YKR040CYKR040C SKI2P35207 1287 aaKnown RBP RIP-Chip data13.64□□□□□ -0.23not detected
YKR040CYKR040C YLR225CQ05948 407 aaKnown RBP13.64□□□□□ -0.23
YKR040CYKR040C SPB4P25808 606 aaPredicted RBP13.63□□□□□ -0.23
YKR040CYKR040C CHS3P29465 1165 aa13.63□□□□□ -0.23
YKR040CYKR040C SPN1Q06505 410 aaPredicted RBP13.63□□□□□ -0.23
YKR040CYKR040C ACE2P21192 770 aa13.62□□□□□ -0.23
YKR040CYKR040C PER1P25625 357 aa13.62□□□□□ -0.23
YKR040CYKR040C GCR2Q01722 534 aa13.62□□□□□ -0.23
YKR040CYKR040C TPM1P17536 199 aaKnown RBP13.61□□□□□ -0.23
YKR040CYKR040C PRO3P32263 286 aaKnown RBP13.61□□□□□ -0.23
YKR040CYKR040C ANP1P32629 500 aa13.61□□□□□ -0.23
YKR040CYKR040C MYO3P36006 1272 aa13.61□□□□□ -0.23
YKR040CYKR040C CRG1P38892 291 aaRIP-Chip data13.61□□□□□ -0.23not detected
YKR040CYKR040C RIT1P23796 513 aa13.6□□□□□ -0.23
YKR040CYKR040C CDC60P26637 1090 aaKnown RBP13.6□□□□□ -0.23
YKR040CYKR040C YML037CQ03703 340 aa13.6□□□□□ -0.23
YKR040CYKR040C SAM2P19358 384 aaKnown RBP13.59□□□□□ -0.23
YKR040CYKR040C RER2P35196 286 aa13.59□□□□□ -0.23
YKR040CYKR040C SOL4P53315 255 aa13.59□□□□□ -0.23
YKR040CYKR040C UBX5Q06682 500 aa13.59□□□□□ -0.23
YKR040CYKR040C TUS1Q06412 1307 aa13.59□□□□□ -0.23
YKR040CYKR040C IMP2'P32351 346 aa13.58□□□□□ -0.24
YKR040CYKR040C CIC1P38779 376 aaKnown RBP13.58□□□□□ -0.24
YKR040CYKR040C PES4P39684 611 aa13.58□□□□□ -0.24
YKR040CYKR040C HXT17P53631 564 aa13.58□□□□□ -0.24
YKR040CYKR040C FOL1P53848 824 aa13.58□□□□□ -0.24
YKR040CYKR040C TY3A-GQ12173 290 aa13.58□□□□□ -0.24
YKR040CYKR040C TY3A-IQ99219 290 aa13.58□□□□□ -0.24
YKR040CYKR040C HDA1P53973 706 aa13.57□□□□□ -0.24
YKR040CYKR040C PGA3Q12746 312 aaKnown RBP13.57□□□□□ -0.24
YKR040CYKR040C SRS2P12954 1174 aa13.56□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms