RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C JSN1P47135 1091 aaKnown RBP RIP-Chip data13.7□□□□□ -0.22not detected
SDH1YKL148C CTI6Q08923 506 aa13.7□□□□□ -0.22
SDH1YKL148C HCA4P20448 770 aaKnown RBP13.69□□□□□ -0.22
SDH1YKL148C CBP3P21560 335 aa13.69□□□□□ -0.22
SDH1YKL148C IRC8P47046 822 aa13.69□□□□□ -0.22
SDH1YKL148C PPM2Q08282 695 aa13.69□□□□□ -0.22
SDH1YKL148C GLO3P38682 493 aaKnown RBP13.68□□□□□ -0.22
SDH1YKL148C NGR1P32831 672 aaKnown RBP13.68□□□□□ -0.22
SDH1YKL148C RPN10P38886 268 aaKnown RBP13.68□□□□□ -0.22
SDH1YKL148C LAM6Q08001 693 aa13.68□□□□□ -0.22
SDH1YKL148C MSB4Q12317 492 aa13.67□□□□□ -0.22
SDH1YKL148C AKR1P39010 764 aa13.66□□□□□ -0.22
SDH1YKL148C GRE2Q12068 342 aaKnown RBP13.66□□□□□ -0.22
SDH1YKL148C SPC110P32380 944 aa13.66□□□□□ -0.22
SDH1YKL148C PSY4P38193 441 aa13.66□□□□□ -0.22
SDH1YKL148C RRP8P38961 392 aaKnown RBP13.65□□□□□ -0.22
SDH1YKL148C SRC1Q03707 834 aa13.65□□□□□ -0.22
SDH1YKL148C DCS2Q12123 353 aa13.65□□□□□ -0.22
SDH1YKL148C COQ1P18900 473 aa13.64□□□□□ -0.23
SDH1YKL148C OSW7P43611 510 aa13.64□□□□□ -0.23
SDH1YKL148C VPS60Q03390 229 aa13.64□□□□□ -0.23
SDH1YKL148C THI3Q07471 609 aa13.64□□□□□ -0.23
SDH1YKL148C COG4Q06096 861 aa13.63□□□□□ -0.23
SDH1YKL148C RPL22AP05749 121 aaKnown RBP13.62□□□□□ -0.23
SDH1YKL148C BMH2P34730 273 aaKnown RBP13.62□□□□□ -0.23
SDH1YKL148C GRX7P38068 203 aa13.62□□□□□ -0.23
SDH1YKL148C VPS75P53853 264 aa13.62□□□□□ -0.23
SDH1YKL148C FAR11P53917 953 aa13.62□□□□□ -0.23
SDH1YKL148C SWI4P25302 1093 aaKnown RBP13.62□□□□□ -0.23
SDH1YKL148C CDC15P27636 974 aa13.62□□□□□ -0.23
SDH1YKL148C IOC3P43596 787 aa13.62□□□□□ -0.23
SDH1YKL148C YCG1Q06680 1035 aa13.62□□□□□ -0.23
SDH1YKL148C PRP40P33203 583 aaKnown RBP13.61□□□□□ -0.23
SDH1YKL148C CIN4P39110 191 aa13.61□□□□□ -0.23
SDH1YKL148C YIR042CP40586 236 aa13.61□□□□□ -0.23
SDH1YKL148C INM2Q05533 292 aa13.61□□□□□ -0.23
SDH1YKL148C TMA16Q08687 178 aa13.61□□□□□ -0.23
SDH1YKL148C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.61□□□□□ -0.23not detected
SDH1YKL148C PET111P08468 800 aa13.6□□□□□ -0.23
SDH1YKL148C CDC6P09119 513 aa13.6□□□□□ -0.23
SDH1YKL148C SSA2P10592 639 aaKnown RBP13.6□□□□□ -0.23
SDH1YKL148C URA1P28272 314 aaPredicted RBP13.6□□□□□ -0.23
SDH1YKL148C UFD2P54860 961 aa13.6□□□□□ -0.23
SDH1YKL148C APL4Q12028 832 aa13.6□□□□□ -0.23
SDH1YKL148C CHO2P05374 869 aaKnown RBP13.6□□□□□ -0.23
SDH1YKL148C MGM1P32266 881 aa13.6□□□□□ -0.23
SDH1YKL148C NPL4P33755 580 aa13.6□□□□□ -0.23
SDH1YKL148C STR2P47164 639 aa13.6□□□□□ -0.23
SDH1YKL148C CUE3P53137 624 aaKnown RBP13.6□□□□□ -0.23
SDH1YKL148C GET3Q12154 354 aaKnown RBP13.6□□□□□ -0.23
SDH1YKL148C SAC6P32599 642 aaKnown RBP13.59□□□□□ -0.23
SDH1YKL148C HCR1Q05775 265 aaKnown RBP13.59□□□□□ -0.23
SDH1YKL148C GEF1P37020 779 aa13.58□□□□□ -0.23
SDH1YKL148C NUG1P40010 520 aaKnown RBP13.58□□□□□ -0.23
SDH1YKL148C TFC6Q06339 672 aa13.58□□□□□ -0.23
SDH1YKL148C PET123P17558 318 aa13.58□□□□□ -0.24
SDH1YKL148C VPS1P21576 704 aaKnown RBP13.58□□□□□ -0.24
SDH1YKL148C MRC1P25588 1096 aa13.58□□□□□ -0.24
SDH1YKL148C PCH2P38126 564 aa13.58□□□□□ -0.24
SDH1YKL148C PRP31P49704 494 aaPredicted RBP13.58□□□□□ -0.24
SDH1YKL148C HDA1P53973 706 aa13.58□□□□□ -0.24
SDH1YKL148C RPS15Q01855 142 aaKnown RBP13.58□□□□□ -0.24
SDH1YKL148C RAT1Q02792 1006 aaKnown RBP13.58□□□□□ -0.24
SDH1YKL148C CYB2P00175 591 aa13.57□□□□□ -0.24
SDH1YKL148C PDC1P06169 563 aaKnown RBP13.57□□□□□ -0.24
SDH1YKL148C ADE17P38009 592 aaKnown RBP13.57□□□□□ -0.24
SDH1YKL148C GFD1Q04839 188 aaKnown RBP13.57□□□□□ -0.24
SDH1YKL148C CSC1Q06538 782 aa13.57□□□□□ -0.24
SDH1YKL148C AFT2Q08957 416 aa13.56□□□□□ -0.24
SDH1YKL148C DPH6Q12429 685 aa13.56□□□□□ -0.24
SDH1YKL148C PHO13P19881 312 aa13.56□□□□□ -0.24
SDH1YKL148C MGA2P40578 1113 aa13.56□□□□□ -0.24
SDH1YKL148C MSH4P40965 878 aaPredicted RBP13.55□□□□□ -0.24
SDH1YKL148C YJL181WP46987 611 aa13.55□□□□□ -0.24
SDH1YKL148C PTK2P47116 818 aaKnown RBP13.55□□□□□ -0.24
SDH1YKL148C BMH1P29311 267 aaKnown RBP13.54□□□□□ -0.24
SDH1YKL148C ICP55P40051 511 aa13.54□□□□□ -0.24
SDH1YKL148C MSH3P25336 1018 aa13.53□□□□□ -0.24
SDH1YKL148C ASF1P32447 279 aa13.53□□□□□ -0.24
SDH1YKL148C ANP1P32629 500 aa13.53□□□□□ -0.24
SDH1YKL148C SAP190P36123 1033 aa13.53□□□□□ -0.24
SDH1YKL148C RPN11P43588 306 aaKnown RBP13.53□□□□□ -0.24
SDH1YKL148C ALD2P47771 506 aa13.53□□□□□ -0.24
SDH1YKL148C APT1P49435 187 aaKnown RBP13.53□□□□□ -0.24
SDH1YKL148C NBL1Q3E7Y6 73 aa13.53□□□□□ -0.24
SDH1YKL148C RRP43P25359 394 aaPredicted RBP13.52□□□□□ -0.24
SDH1YKL148C MAL31P38156 614 aa13.52□□□□□ -0.24
SDH1YKL148C GDE1Q02979 1223 aa13.52□□□□□ -0.24
SDH1YKL148C MCM3P24279 971 aaKnown RBP13.52□□□□□ -0.25
SDH1YKL148C RXT2P38255 430 aa13.52□□□□□ -0.25
SDH1YKL148C RTT107P38850 1070 aa13.52□□□□□ -0.25
SDH1YKL148C RAD26P40352 1085 aa13.52□□□□□ -0.25
SDH1YKL148C MMR1Q06324 491 aa13.52□□□□□ -0.25
SDH1YKL148C PTC5Q12511 572 aa13.52□□□□□ -0.25
SDH1YKL148C BOI1P38041 980 aaKnown RBP13.51□□□□□ -0.25
SDH1YKL148C CAJ1P39101 391 aa13.51□□□□□ -0.25
SDH1YKL148C EIS1Q05050 843 aaKnown RBP13.51□□□□□ -0.25
SDH1YKL148C MRD1Q06106 887 aaKnown RBP13.51□□□□□ -0.25
SDH1YKL148C DIB1Q06819 143 aaPredicted RBP13.51□□□□□ -0.25
SDH1YKL148C PXL1P36166 706 aa13.51□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms