RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C YPL260WQ08977 551 aa5.49□□□□□ -1.53
SWI3YJL176C KEL3Q08979 651 aaPredicted RBP5.49□□□□□ -1.53
SWI3YJL176C RIM20Q12033 661 aa5.49□□□□□ -1.53
SWI3YJL176C YBL028CP38202 106 aa5.49□□□□□ -1.53
SWI3YJL176C RRP8P38961 392 aaKnown RBP5.49□□□□□ -1.53
SWI3YJL176C PKH3Q03306 898 aaPredicted RBP5.49□□□□□ -1.53
SWI3YJL176C LAM4P38800 1345 aa5.48□□□□□ -1.53
SWI3YJL176C FPR4Q06205 392 aaPredicted RBP5.48□□□□□ -1.53
SWI3YJL176C GSC2P40989 1895 aa5.48□□□□□ -1.53
SWI3YJL176C MPH3P0CE00 602 aa5.48□□□□□ -1.53
SWI3YJL176C HVG1P0CE11 249 aa5.48□□□□□ -1.53
SWI3YJL176C KIN1P13185 1064 aa5.48□□□□□ -1.53
SWI3YJL176C PFK2P16862 959 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SWI3YJL176C MET1P36150 593 aa5.48□□□□□ -1.53
SWI3YJL176C PCS60P38137 543 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SWI3YJL176C RTS1P38903 757 aa5.48□□□□□ -1.53
SWI3YJL176C SLN1P39928 1220 aaPredicted RBP5.48□□□□□ -1.53
SWI3YJL176C SNU71P53207 620 aaKnown RBP5.48□□□□□ -1.53
SWI3YJL176C YDL124WQ07551 312 aaKnown RBP5.48□□□□□ -1.53
SWI3YJL176C GIN4Q12263 1142 aa5.48□□□□□ -1.53
SWI3YJL176C MRD1Q06106 887 aaKnown RBP5.47□□□□□ -1.53
SWI3YJL176C PPM2Q08282 695 aa5.47□□□□□ -1.53
SWI3YJL176C COQ1P18900 473 aa5.47□□□□□ -1.53
SWI3YJL176C AAP1P37898 856 aaKnown RBP5.47□□□□□ -1.53
SWI3YJL176C CST26P38226 397 aa5.47□□□□□ -1.53
SWI3YJL176C SSF2Q12153 453 aaPredicted RBP5.47□□□□□ -1.53
SWI3YJL176C TPM1P17536 199 aaKnown RBP5.46□□□□□ -1.54
SWI3YJL176C ACA1P39970 489 aa5.46□□□□□ -1.54
SWI3YJL176C DUS1P53759 423 aaKnown RBP5.46□□□□□ -1.54
SWI3YJL176C CST9Q06032 482 aa5.46□□□□□ -1.54
SWI3YJL176C TIF6Q12522 245 aaKnown RBP5.46□□□□□ -1.54
SWI3YJL176C TUB2P02557 457 aaKnown RBP5.46□□□□□ -1.54
SWI3YJL176C PRE8P23639 250 aa5.46□□□□□ -1.54
SWI3YJL176C BRN1P38170 754 aa5.46□□□□□ -1.54
SWI3YJL176C YHL050CP38721 697 aa5.46□□□□□ -1.54
SWI3YJL176C GCR2Q01722 534 aa5.46□□□□□ -1.54
SWI3YJL176C PEX29Q03370 554 aa5.46□□□□□ -1.54
SWI3YJL176C HAA1Q12753 694 aaKnown RBP5.46□□□□□ -1.54
SWI3YJL176C RAD61Q99359 647 aa5.46□□□□□ -1.54
SWI3YJL176C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SWI3YJL176C RSC30P38781 883 aa5.45□□□□□ -1.54
SWI3YJL176C VID27P40157 782 aa5.45□□□□□ -1.54
SWI3YJL176C RPS15Q01855 142 aaKnown RBP5.45□□□□□ -1.54
SWI3YJL176C SRM1P21827 482 aa5.45□□□□□ -1.54
SWI3YJL176C SPT21P35209 758 aa5.45□□□□□ -1.54
SWI3YJL176C UFD2P54860 961 aa5.45□□□□□ -1.54
SWI3YJL176C RBA50Q04418 439 aa5.45□□□□□ -1.54
SWI3YJL176C CHO2P05374 869 aaKnown RBP5.44□□□□□ -1.54
SWI3YJL176C OCT1P35999 772 aa5.44□□□□□ -1.54
SWI3YJL176C APE3P37302 537 aaKnown RBP5.44□□□□□ -1.54
SWI3YJL176C DLD1P32891 587 aa5.43□□□□□ -1.54
SWI3YJL176C LYS14P40971 790 aa5.43□□□□□ -1.54
SWI3YJL176C JIP4Q03361 876 aa5.43□□□□□ -1.54
SWI3YJL176C LAP2Q10740 671 aa5.43□□□□□ -1.54
SWI3YJL176C SRF1Q12516 437 aa5.43□□□□□ -1.54
SWI3YJL176C CRG1P38892 291 aaRIP-Chip data5.43□□□□□ -1.54not detected
SWI3YJL176C VPS8P39702 1274 aa5.43□□□□□ -1.54
SWI3YJL176C TIF4631P39935 952 aaKnown RBP5.43□□□□□ -1.54
SWI3YJL176C SKG3Q06315 1026 aa5.43□□□□□ -1.54
SWI3YJL176C SPN1Q06505 410 aaPredicted RBP5.43□□□□□ -1.54
SWI3YJL176C ERG12P07277 443 aa5.42□□□□□ -1.54
SWI3YJL176C MOT2P34909 587 aaKnown RBP5.42□□□□□ -1.54
SWI3YJL176C HXT17P53631 564 aa5.42□□□□□ -1.54
SWI3YJL176C ANP1P32629 500 aa5.42□□□□□ -1.54
SWI3YJL176C MYO3P36006 1272 aa5.42□□□□□ -1.54
SWI3YJL176C CIC1P38779 376 aaKnown RBP5.42□□□□□ -1.54
SWI3YJL176C PES4P39684 611 aa5.42□□□□□ -1.54
SWI3YJL176C HXT13P39924 564 aa5.42□□□□□ -1.54
SWI3YJL176C VAB2P40003 282 aa5.42□□□□□ -1.54
SWI3YJL176C SUB2Q07478 446 aaKnown RBP5.42□□□□□ -1.54
SWI3YJL176C RPC31P17890 251 aa5.41□□□□□ -1.54
SWI3YJL176C RIT1P23796 513 aa5.41□□□□□ -1.54
SWI3YJL176C IMP2'P32351 346 aa5.41□□□□□ -1.54
SWI3YJL176C RER2P35196 286 aa5.41□□□□□ -1.54
SWI3YJL176C NET1P47035 1189 aa5.41□□□□□ -1.54
SWI3YJL176C PEP3P27801 918 aa5.41□□□□□ -1.54
SWI3YJL176C CHS3P29465 1165 aa5.41□□□□□ -1.54
SWI3YJL176C PRO3P32263 286 aaKnown RBP5.41□□□□□ -1.54
SWI3YJL176C ASH1P34233 588 aa5.41□□□□□ -1.54
SWI3YJL176C MCD4P36051 919 aa5.41□□□□□ -1.54
SWI3YJL176C SPR3P41901 512 aa5.41□□□□□ -1.54
SWI3YJL176C PGA3Q12746 312 aaKnown RBP5.41□□□□□ -1.54
SWI3YJL176C FBP1P09201 348 aa5.4□□□□□ -1.54
SWI3YJL176C YDJ1P25491 409 aaKnown RBP5.4□□□□□ -1.54
SWI3YJL176C PER1P25625 357 aa5.4□□□□□ -1.54
SWI3YJL176C ESF1Q06344 628 aaKnown RBP5.4□□□□□ -1.54
SWI3YJL176C TUS1Q06412 1307 aa5.4□□□□□ -1.54
SWI3YJL176C KRS1P15180 591 aaKnown RBP5.4□□□□□ -1.55
SWI3YJL176C SPB4P25808 606 aaPredicted RBP5.4□□□□□ -1.55
SWI3YJL176C SIS2P36024 562 aa5.4□□□□□ -1.55
SWI3YJL176C ERG7P38604 731 aa5.4□□□□□ -1.55
SWI3YJL176C SPO22P40511 975 aa5.4□□□□□ -1.55
SWI3YJL176C KRI1P42846 591 aaKnown RBP5.4□□□□□ -1.55
SWI3YJL176C SOL4P53315 255 aa5.4□□□□□ -1.55
SWI3YJL176C CLF1Q12309 687 aaPredicted RBP5.4□□□□□ -1.55
SWI3YJL176C ACE2P21192 770 aa5.39□□□□□ -1.55
SWI3YJL176C NCS6P53088 359 aa5.39□□□□□ -1.55
SWI3YJL176C FOL1P53848 824 aa5.39□□□□□ -1.55
SWI3YJL176C YML037CQ03703 340 aa5.39□□□□□ -1.55
SWI3YJL176C EST2Q06163 884 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms