RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W TBS1P38114 1094 aa5.84□□□□□ -1.48
NMD3YHR170W AAD14P42884 376 aa5.84□□□□□ -1.48
NMD3YHR170W MTR4P47047 1073 aaKnown RBP5.84□□□□□ -1.48
NMD3YHR170W SNF2P22082 1703 aa5.83□□□□□ -1.48
NMD3YHR170W AUS1Q08409 1394 aa5.83□□□□□ -1.48
NMD3YHR170W URB1P34241 1764 aaKnown RBP5.83□□□□□ -1.48
NMD3YHR170W CYT1P07143 309 aa5.83□□□□□ -1.48
NMD3YHR170W UBP1P25037 809 aa5.83□□□□□ -1.48
NMD3YHR170W CDC3P32457 520 aaKnown RBP5.83□□□□□ -1.48
NMD3YHR170W UTP7P40055 554 aaKnown RBP5.83□□□□□ -1.48
NMD3YHR170W PTK2P47116 818 aaKnown RBP5.83□□□□□ -1.48
NMD3YHR170W PUF6Q04373 656 aaKnown RBP5.83□□□□□ -1.48
NMD3YHR170W YPQ2Q06328 317 aa5.83□□□□□ -1.48
NMD3YHR170W VAN1P23642 535 aa5.82□□□□□ -1.48
NMD3YHR170W YRF1-2P40105 1681 aa5.82□□□□□ -1.48
NMD3YHR170W FKS3Q04952 1785 aa5.81□□□□□ -1.48
NMD3YHR170W ARG82P07250 355 aa5.8□□□□□ -1.48
NMD3YHR170W KAR2P16474 682 aaKnown RBP5.8□□□□□ -1.48
NMD3YHR170W NGR1P32831 672 aaKnown RBP5.8□□□□□ -1.48
NMD3YHR170W SUM1P46676 1062 aa5.8□□□□□ -1.48
NMD3YHR170W PRP43P53131 767 aaKnown RBP5.8□□□□□ -1.48
NMD3YHR170W PUN1Q06991 263 aa5.8□□□□□ -1.48
NMD3YHR170W RPP2BP02400 110 aaKnown RBP5.8□□□□□ -1.48
NMD3YHR170W DLD1P32891 587 aa5.8□□□□□ -1.48
NMD3YHR170W PRS1P32895 427 aaKnown RBP5.8□□□□□ -1.48
NMD3YHR170W SSN3P39073 555 aa5.8□□□□□ -1.48
NMD3YHR170W RRP46P53256 223 aaPredicted RBP5.8□□□□□ -1.48
NMD3YHR170W PNP1Q05788 311 aa5.8□□□□□ -1.48
NMD3YHR170W PRP45P28004 379 aaPredicted RBP5.79□□□□□ -1.48
NMD3YHR170W DLD3P39976 496 aaKnown RBP5.79□□□□□ -1.48
NMD3YHR170W TAP42Q04372 366 aa5.79□□□□□ -1.48
NMD3YHR170W TRS33Q99394 268 aa5.79□□□□□ -1.48
NMD3YHR170W SRS2P12954 1174 aa5.78□□□□□ -1.48
NMD3YHR170W PRP5P21372 849 aaPredicted RBP5.78□□□□□ -1.48
NMD3YHR170W NUP85P46673 744 aa5.78□□□□□ -1.48
NMD3YHR170W PAP2P53632 584 aaKnown RBP5.78□□□□□ -1.48
NMD3YHR170W APC1P53886 1748 aa5.78□□□□□ -1.48
NMD3YHR170W HAT1Q12341 374 aa5.78□□□□□ -1.48
NMD3YHR170W BOL3P39724 118 aa5.77□□□□□ -1.49
NMD3YHR170W YJR098CP47139 656 aa5.77□□□□□ -1.49
NMD3YHR170W SRF1Q12516 437 aa5.77□□□□□ -1.49
NMD3YHR170W HXT5P38695 592 aa5.76□□□□□ -1.49
NMD3YHR170W BRE2P43132 505 aa5.76□□□□□ -1.49
NMD3YHR170W MPP10P47083 593 aaKnown RBP5.76□□□□□ -1.49
NMD3YHR170W YNL165WP53891 406 aa5.76□□□□□ -1.49
NMD3YHR170W YRF1-3P0CX14 1859 aa5.76□□□□□ -1.49
NMD3YHR170W YRF1-7P0CX15 1859 aa5.76□□□□□ -1.49
NMD3YHR170W YRF1-6P53819 1859 aa5.76□□□□□ -1.49
NMD3YHR170W MCM1P11746 286 aa5.76□□□□□ -1.49
NMD3YHR170W GRX4P32642 244 aa5.76□□□□□ -1.49
NMD3YHR170W YBR197CP38306 217 aa5.76□□□□□ -1.49
NMD3YHR170W YDL144CQ07589 356 aa5.76□□□□□ -1.49
NMD3YHR170W SLA1P32790 1244 aa5.75□□□□□ -1.49
NMD3YHR170W SHM1P37292 490 aaPredicted RBP5.75□□□□□ -1.49
NMD3YHR170W BOI1P38041 980 aaKnown RBP5.75□□□□□ -1.49
NMD3YHR170W SSF1P38789 453 aaPredicted RBP5.75□□□□□ -1.49
NMD3YHR170W FUN12P39730 1002 aaKnown RBP5.75□□□□□ -1.49
NMD3YHR170W RTR1P40084 226 aaPredicted RBP5.75□□□□□ -1.49
NMD3YHR170W TY1A-DR3Q12441 440 aa5.75□□□□□ -1.49
NMD3YHR170W ENT1Q12518 454 aa5.75□□□□□ -1.49
NMD3YHR170W RPS31P05759 152 aaKnown RBP5.74□□□□□ -1.49
NMD3YHR170W TRL1P09880 827 aaKnown RBP5.74□□□□□ -1.49
NMD3YHR170W SLD2P34252 453 aa5.74□□□□□ -1.49
NMD3YHR170W MSN5P52918 1224 aa5.74□□□□□ -1.49
NMD3YHR170W SNU71P53207 620 aaKnown RBP5.74□□□□□ -1.49
NMD3YHR170W KAR5Q04746 504 aa5.74□□□□□ -1.49
NMD3YHR170W SLM3Q12093 417 aa5.74□□□□□ -1.49
NMD3YHR170W RPO41P13433 1351 aaKnown RBP5.73□□□□□ -1.49
NMD3YHR170W DAL1P32375 460 aa5.73□□□□□ -1.49
NMD3YHR170W ERP5P38819 212 aa5.73□□□□□ -1.49
NMD3YHR170W CWH41P53008 833 aa5.73□□□□□ -1.49
NMD3YHR170W LSC2P53312 427 aa5.73□□□□□ -1.49
NMD3YHR170W SUI2P20459 304 aaKnown RBP5.72□□□□□ -1.49
NMD3YHR170W ALA1P40825 983 aaKnown RBP5.72□□□□□ -1.49
NMD3YHR170W JJJ2P46997 583 aa5.72□□□□□ -1.49
NMD3YHR170W TCB1Q12466 1186 aa5.72□□□□□ -1.49
NMD3YHR170W YBL113CQ7M4S9 792 aa5.72□□□□□ -1.49
NMD3YHR170W PRD1P25375 712 aa5.72□□□□□ -1.49
NMD3YHR170W ISC10P32645 267 aa5.72□□□□□ -1.49
NMD3YHR170W XKS1P42826 600 aa5.72□□□□□ -1.49
NMD3YHR170W VTC4P47075 721 aa5.72□□□□□ -1.49
NMD3YHR170W GCR2Q01722 534 aa5.72□□□□□ -1.49
NMD3YHR170W FOX2Q02207 900 aaKnown RBP5.72□□□□□ -1.49
NMD3YHR170W THI22Q06490 572 aa5.72□□□□□ -1.49
NMD3YHR170W OPT2Q06593 877 aa5.72□□□□□ -1.49
NMD3YHR170W LSO1Q3E827 93 aa5.72□□□□□ -1.49
NMD3YHR170W Q0182Q9ZZW1 134 aa5.72□□□□□ -1.49
NMD3YHR170W AKL1P38080 1108 aaKnown RBP5.71□□□□□ -1.5
NMD3YHR170W VPS27P40343 622 aaKnown RBP5.71□□□□□ -1.5
NMD3YHR170W MDJ2P42834 146 aa5.71□□□□□ -1.5
NMD3YHR170W SAP155P43612 1002 aa5.71□□□□□ -1.5
NMD3YHR170W RVB2Q12464 471 aaKnown RBP5.71□□□□□ -1.5
NMD3YHR170W YRF1-4O13559 1382 aa5.7□□□□□ -1.5
NMD3YHR170W FUR4P05316 633 aaKnown RBP5.7□□□□□ -1.5
NMD3YHR170W RPP0P05317 312 aaKnown RBP5.69□□□□□ -1.5
NMD3YHR170W MLF3P32047 452 aa5.69□□□□□ -1.5
NMD3YHR170W IRE1P32361 1115 aa5.69□□□□□ -1.5
NMD3YHR170W KTR2P33550 425 aa5.69□□□□□ -1.5
NMD3YHR170W DSD1P53095 428 aa5.69□□□□□ -1.5
NMD3YHR170W RTT109Q07794 436 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 73 ms