RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C MGA2P40578 1113 aa11.13□□□□□ -0.63
PBP1YGR178C YMR1P47147 688 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
PBP1YGR178C VPS38Q05919 439 aa11.13□□□□□ -0.63
PBP1YGR178C TOP1P04786 769 aa11.12□□□□□ -0.63
PBP1YGR178C MATALPHA2P0CY08 210 aa11.12□□□□□ -0.63
PBP1YGR178C HMLALPHA2P0CY09 210 aa11.12□□□□□ -0.63
PBP1YGR178C CDC60P26637 1090 aaKnown RBP11.12□□□□□ -0.63
PBP1YGR178C RFT1P38206 574 aaPredicted RBP11.12□□□□□ -0.63
PBP1YGR178C YNR029CP53729 429 aaKnown RBP11.12□□□□□ -0.63
PBP1YGR178C RAD3P06839 778 aa11.11□□□□□ -0.63
PBP1YGR178C DAL7P21826 554 aa11.11□□□□□ -0.63
PBP1YGR178C FBP26P32604 452 aa11.11□□□□□ -0.63
PBP1YGR178C YEL043WP32618 956 aa11.11□□□□□ -0.63
PBP1YGR178C CBF5P33322 483 aaKnown RBP RIP-Chip data11.11□□□□□ -0.63not detected
PBP1YGR178C KCC4P25389 1037 aa11.11□□□□□ -0.63
PBP1YGR178C THI12P42883 340 aa11.11□□□□□ -0.63
PBP1YGR178C THI5P43534 340 aa11.11□□□□□ -0.63
PBP1YGR178C THI11P47183 340 aa11.11□□□□□ -0.63
PBP1YGR178C NNF2P53253 936 aa11.11□□□□□ -0.63
PBP1YGR178C ALF1P53904 254 aa11.11□□□□□ -0.63
PBP1YGR178C DNM1P54861 757 aa11.11□□□□□ -0.63
PBP1YGR178C YMR196WQ04336 1088 aa11.11□□□□□ -0.63
PBP1YGR178C THI13Q07748 340 aa11.11□□□□□ -0.63
PBP1YGR178C DIP2Q12220 943 aaPredicted RBP11.11□□□□□ -0.63
PBP1YGR178C RGP1P16664 663 aa11.1□□□□□ -0.63
PBP1YGR178C HEL1P36113 551 aa11.1□□□□□ -0.63
PBP1YGR178C UBP12P39538 1254 aa11.1□□□□□ -0.63
PBP1YGR178C TY4B-HP0C2J7 1802 aa11.1□□□□□ -0.63
PBP1YGR178C TY4B-JP47024 1803 aa11.1□□□□□ -0.63
PBP1YGR178C RAD1P06777 1100 aa11.1□□□□□ -0.63
PBP1YGR178C SSF1P38789 453 aaPredicted RBP11.1□□□□□ -0.63
PBP1YGR178C MIC19P43594 170 aa11.1□□□□□ -0.63
PBP1YGR178C BOP3P53958 396 aa11.1□□□□□ -0.63
PBP1YGR178C YLR407WQ06070 228 aa11.1□□□□□ -0.63
PBP1YGR178C TAN1P53072 289 aaPredicted RBP11.09□□□□□ -0.63
PBP1YGR178C ESF1Q06344 628 aaKnown RBP11.09□□□□□ -0.63
PBP1YGR178C MDM38Q08179 573 aa11.09□□□□□ -0.63
PBP1YGR178C HSP82P02829 709 aaKnown RBP11.09□□□□□ -0.63
PBP1YGR178C PRP16P15938 1071 aaPredicted RBP11.09□□□□□ -0.63
PBP1YGR178C EPL1P43572 832 aa11.09□□□□□ -0.63
PBP1YGR178C YJR079WP47126 109 aa11.09□□□□□ -0.63
PBP1YGR178C OSH2Q12451 1283 aa11.09□□□□□ -0.63
PBP1YGR178C LPD1P09624 499 aaKnown RBP11.08□□□□□ -0.64
PBP1YGR178C PRE10P21242 288 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
PBP1YGR178C CTF4Q01454 927 aa11.08□□□□□ -0.64
PBP1YGR178C HCR1Q05775 265 aaKnown RBP11.08□□□□□ -0.64
PBP1YGR178C PGI1P12709 554 aaKnown RBP11.07□□□□□ -0.64
PBP1YGR178C SEC14P24280 304 aaKnown RBP11.07□□□□□ -0.64
PBP1YGR178C RAD51P25454 400 aa11.07□□□□□ -0.64
PBP1YGR178C SEC65P29478 273 aa11.07□□□□□ -0.64
PBP1YGR178C IMP2'P32351 346 aa11.07□□□□□ -0.64
PBP1YGR178C ZUO1P32527 433 aaKnown RBP11.07□□□□□ -0.64
PBP1YGR178C CST6P40535 587 aa11.07□□□□□ -0.64
PBP1YGR178C HXK1P04806 485 aaKnown RBP11.07□□□□□ -0.64
PBP1YGR178C PTC4P38089 393 aa11.07□□□□□ -0.64
PBP1YGR178C CCC2P38995 1004 aa11.07□□□□□ -0.64
PBP1YGR178C AFT2Q08957 416 aa11.07□□□□□ -0.64
PBP1YGR178C PXL1P36166 706 aa11.06□□□□□ -0.64
PBP1YGR178C SMF1P38925 575 aa11.06□□□□□ -0.64
PBP1YGR178C YJR142WP47173 342 aa11.06□□□□□ -0.64
PBP1YGR178C SAC6P32599 642 aaKnown RBP11.06□□□□□ -0.64
PBP1YGR178C ADE17P38009 592 aaKnown RBP11.06□□□□□ -0.64
PBP1YGR178C HXT10P43581 546 aa11.06□□□□□ -0.64
PBP1YGR178C FKS3Q04952 1785 aa11.05□□□□□ -0.64
PBP1YGR178C JIP3O13555 125 aa11.05□□□□□ -0.64
PBP1YGR178C ARD1P07347 238 aaPredicted RBP11.05□□□□□ -0.64
PBP1YGR178C BUD16P39988 312 aa11.05□□□□□ -0.64
PBP1YGR178C STE23Q06010 1027 aa11.05□□□□□ -0.64
PBP1YGR178C VAC14Q06708 880 aa11.05□□□□□ -0.64
PBP1YGR178C RAD53P22216 821 aa11.04□□□□□ -0.64
PBP1YGR178C PEP3P27801 918 aa11.04□□□□□ -0.64
PBP1YGR178C SEC26P41810 973 aaKnown RBP11.04□□□□□ -0.64
PBP1YGR178C VPS30Q02948 557 aa11.04□□□□□ -0.64
PBP1YGR178C GFD1Q04839 188 aaKnown RBP11.04□□□□□ -0.64
PBP1YGR178C ALE1Q08548 619 aa11.04□□□□□ -0.64
PBP1YGR178C ISW1P38144 1129 aa11.04□□□□□ -0.64
PBP1YGR178C TRS85P46944 698 aa11.04□□□□□ -0.64
PBP1YGR178C SMC6Q12749 1114 aa11.04□□□□□ -0.64
PBP1YGR178C ALD2P47771 506 aa11.03□□□□□ -0.64
PBP1YGR178C SHM1P37292 490 aaPredicted RBP11.03□□□□□ -0.64
PBP1YGR178C ATG3P40344 310 aa11.02□□□□□ -0.65
PBP1YGR178C EPS1P40557 701 aa11.02□□□□□ -0.65
PBP1YGR178C LCB5Q06147 687 aaKnown RBP11.02□□□□□ -0.65
PBP1YGR178C PMR1P13586 950 aa11.01□□□□□ -0.65
PBP1YGR178C SEC23P15303 768 aaKnown RBP11.01□□□□□ -0.65
PBP1YGR178C YME2P32843 850 aa11.01□□□□□ -0.65
PBP1YGR178C NFU1P32860 256 aa11.01□□□□□ -0.65
PBP1YGR178C ECM23Q02710 187 aa11.01□□□□□ -0.65
PBP1YGR178C CMS1Q07897 291 aaKnown RBP11.01□□□□□ -0.65
PBP1YGR178C SSK22P25390 1331 aaPredicted RBP11.01□□□□□ -0.65
PBP1YGR178C RPS6AP0CX37 236 aaKnown RBP11.01□□□□□ -0.65
PBP1YGR178C RPS6BP0CX38 236 aaPredicted RBP11.01□□□□□ -0.65
PBP1YGR178C PUP2P32379 260 aa11.01□□□□□ -0.65
PBP1YGR178C MCX1P38323 520 aaPredicted RBP11.01□□□□□ -0.65
PBP1YGR178C VTC3Q02725 835 aa11.01□□□□□ -0.65
PBP1YGR178C SPO19Q03029 223 aa11.01□□□□□ -0.65
PBP1YGR178C HCA4P20448 770 aaKnown RBP11□□□□□ -0.65
PBP1YGR178C DPH5P32469 300 aaPredicted RBP11□□□□□ -0.65
PBP1YGR178C YSW1P38280 609 aa11□□□□□ -0.65
PBP1YGR178C TPS3P38426 1054 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 95.7 ms