RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C CHD1P32657 1468 aa3.82□□□□□ -1.8
CDH1YGL003C STH1P32597 1359 aa3.82□□□□□ -1.8
CDH1YGL003C RPT1P33299 467 aaKnown RBP3.81□□□□□ -1.8
CDH1YGL003C MFT1P33441 392 aaKnown RBP3.81□□□□□ -1.8
CDH1YGL003C PSY2P40164 858 aa3.81□□□□□ -1.8
CDH1YGL003C RMD1Q03441 430 aa3.81□□□□□ -1.8
CDH1YGL003C GIR2Q03768 265 aaPredicted RBP3.81□□□□□ -1.8
CDH1YGL003C YLR346CQ06139 101 aa3.81□□□□□ -1.8
CDH1YGL003C NOC3Q07896 663 aaPredicted RBP3.81□□□□□ -1.8
CDH1YGL003C TCB1Q12466 1186 aa3.81□□□□□ -1.8
CDH1YGL003C GAL11P19659 1081 aa3.81□□□□□ -1.8
CDH1YGL003C MET1P36150 593 aa3.81□□□□□ -1.8
CDH1YGL003C HOS4P40480 1083 aa3.81□□□□□ -1.8
CDH1YGL003C SKP1P52286 194 aa3.81□□□□□ -1.8
CDH1YGL003C UBP2Q01476 1272 aa3.81□□□□□ -1.8
CDH1YGL003C GCR2Q01722 534 aa3.81□□□□□ -1.8
CDH1YGL003C OXR1Q08952 273 aa3.81□□□□□ -1.8
CDH1YGL003C TIF6Q12522 245 aaKnown RBP3.81□□□□□ -1.8
CDH1YGL003C SEC3P33332 1336 aaKnown RBP3.81□□□□□ -1.8
CDH1YGL003C MON2P48563 1636 aaPredicted RBP3.8□□□□□ -1.8
CDH1YGL003C RGP1P16664 663 aa3.8□□□□□ -1.8
CDH1YGL003C CLC1P17891 233 aa3.8□□□□□ -1.8
CDH1YGL003C BSD2P38356 321 aa3.8□□□□□ -1.8
CDH1YGL003C FYV10P40492 516 aa3.8□□□□□ -1.8
CDH1YGL003C NNF1P47149 201 aa3.8□□□□□ -1.8
CDH1YGL003C XRN1P22147 1528 aaKnown RBP3.79□□□□□ -1.8
CDH1YGL003C CDC19P00549 500 aaKnown RBP3.79□□□□□ -1.8
CDH1YGL003C RPP1AP05318 106 aaPredicted RBP3.79□□□□□ -1.8
CDH1YGL003C RRP14P36080 434 aaKnown RBP3.79□□□□□ -1.8
CDH1YGL003C AIM46P38885 310 aa3.79□□□□□ -1.8
CDH1YGL003C TPM2P40414 161 aa3.79□□□□□ -1.8
CDH1YGL003C AIM21P40563 679 aa3.79□□□□□ -1.8
CDH1YGL003C BRE2P43132 505 aa3.79□□□□□ -1.8
CDH1YGL003C YGR122WP53272 402 aa3.79□□□□□ -1.8
CDH1YGL003C CUS1Q02554 436 aaPredicted RBP3.79□□□□□ -1.8
CDH1YGL003C TMA64Q04600 565 aaKnown RBP3.79□□□□□ -1.8
CDH1YGL003C HSP82P02829 709 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C MCM2P29469 868 aa3.78□□□□□ -1.8
CDH1YGL003C GLY1P37303 387 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C ESF1Q06344 628 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C MAG2Q06436 670 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C YDL121CQ07541 149 aa3.78□□□□□ -1.8
CDH1YGL003C QCR6P00127 147 aa3.78□□□□□ -1.8
CDH1YGL003C FLP1P03870 423 aa3.78□□□□□ -1.8
CDH1YGL003C VMA4P22203 233 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C NAB2P32505 525 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
CDH1YGL003C YHL008CP38750 627 aa3.78□□□□□ -1.8
CDH1YGL003C NOC2P39744 710 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C BOI2P39969 1040 aa3.78□□□□□ -1.8
CDH1YGL003C VPS27P40343 622 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C TLG1Q03322 224 aa3.78□□□□□ -1.8
CDH1YGL003C YCS4Q06156 1176 aa3.78□□□□□ -1.8
CDH1YGL003C INP54Q08227 384 aaKnown RBP3.78□□□□□ -1.8
CDH1YGL003C SPT7P35177 1332 aa3.78□□□□□ -1.8
CDH1YGL003C HXK1P04806 485 aaKnown RBP3.77□□□□□ -1.81
CDH1YGL003C TAF13P11747 167 aa3.77□□□□□ -1.81
CDH1YGL003C APM2P38700 605 aa3.77□□□□□ -1.81
CDH1YGL003C OSH7P38755 437 aa3.77□□□□□ -1.81
CDH1YGL003C SPP41P38904 1435 aa3.77□□□□□ -1.81
CDH1YGL003C RPS26AP39938 119 aaKnown RBP3.77□□□□□ -1.81
CDH1YGL003C RPS26BP39939 119 aaKnown RBP3.77□□□□□ -1.81
CDH1YGL003C YIL165CP40446 119 aa3.77□□□□□ -1.81
CDH1YGL003C ITC1P53125 1264 aa3.77□□□□□ -1.81
CDH1YGL003C ESF2P53743 316 aaKnown RBP3.77□□□□□ -1.81
CDH1YGL003C SPR28Q04921 423 aa3.77□□□□□ -1.81
CDH1YGL003C JIP5Q06214 492 aaPredicted RBP3.77□□□□□ -1.81
CDH1YGL003C EMG1Q06287 252 aaKnown RBP3.77□□□□□ -1.81
CDH1YGL003C OPT2Q06593 877 aa3.77□□□□□ -1.81
CDH1YGL003C PLP2Q12017 286 aa3.77□□□□□ -1.81
CDH1YGL003C INO80P53115 1489 aa3.76□□□□□ -1.81
CDH1YGL003C CYC8P14922 966 aa3.76□□□□□ -1.81
CDH1YGL003C KAR2P16474 682 aaKnown RBP3.76□□□□□ -1.81
CDH1YGL003C MPE1P35728 441 aaKnown RBP3.76□□□□□ -1.81
CDH1YGL003C NCL1P38205 684 aaKnown RBP3.76□□□□□ -1.81
CDH1YGL003C ECM2P38241 364 aaKnown RBP3.76□□□□□ -1.81
CDH1YGL003C PMC1P38929 1173 aaPredicted RBP3.76□□□□□ -1.81
CDH1YGL003C ERP2P39704 215 aa3.76□□□□□ -1.81
CDH1YGL003C POL5P39985 1022 aaKnown RBP3.76□□□□□ -1.81
CDH1YGL003C IES1P43579 692 aa3.76□□□□□ -1.81
CDH1YGL003C YGL081WP53156 320 aa3.76□□□□□ -1.81
CDH1YGL003C SCW11P53189 542 aa3.76□□□□□ -1.81
CDH1YGL003C MSH6Q03834 1242 aa3.76□□□□□ -1.81
CDH1YGL003C IME2P32581 645 aa3.75□□□□□ -1.81
CDH1YGL003C PEP7P32609 515 aa3.75□□□□□ -1.81
CDH1YGL003C PRP40P33203 583 aaKnown RBP3.75□□□□□ -1.81
CDH1YGL003C MRPL16P38064 232 aa3.75□□□□□ -1.81
CDH1YGL003C YER156CP40093 338 aaKnown RBP3.75□□□□□ -1.81
CDH1YGL003C SRC1Q03707 834 aa3.75□□□□□ -1.81
CDH1YGL003C DAL4Q04895 635 aa3.75□□□□□ -1.81
CDH1YGL003C MCD1Q12158 566 aa3.75□□□□□ -1.81
CDH1YGL003C SSB1P11484 613 aaKnown RBP3.75□□□□□ -1.81
CDH1YGL003C DAL5P15365 543 aa3.75□□□□□ -1.81
CDH1YGL003C CLN2P20438 545 aa3.75□□□□□ -1.81
CDH1YGL003C TSR4P25040 408 aa3.75□□□□□ -1.81
CDH1YGL003C MNR2P35724 969 aa3.75□□□□□ -1.81
CDH1YGL003C BLI1P35727 113 aa3.75□□□□□ -1.81
CDH1YGL003C SSB2P40150 613 aaKnown RBP3.75□□□□□ -1.81
CDH1YGL003C MAD1P40957 749 aa3.75□□□□□ -1.81
CDH1YGL003C RNH70P53331 553 aa3.75□□□□□ -1.81
CDH1YGL003C CTR9P89105 1077 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms